BLASTX nr result

ID: Bupleurum21_contig00002449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002449
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282756.1| PREDICTED: uncharacterized protein LOC100250...   361   2e-97
ref|XP_002527964.1| conserved hypothetical protein [Ricinus comm...   353   6e-95
emb|CAN62770.1| hypothetical protein VITISV_027108 [Vitis vinifera]   352   2e-94
emb|CBI20773.3| unnamed protein product [Vitis vinifera]              350   4e-94
ref|XP_002330810.1| predicted protein [Populus trichocarpa] gi|2...   339   1e-90

>ref|XP_002282756.1| PREDICTED: uncharacterized protein LOC100250872 [Vitis vinifera]
          Length = 321

 Score =  361 bits (927), Expect = 2e-97
 Identities = 189/311 (60%), Positives = 213/311 (68%), Gaps = 16/311 (5%)
 Frame = -1

Query: 1225 HSSTFIMEIDQQNTDWENVSCPICLESPHNGVLLQCSSHEKGCRPFVCDTDHLHSNCLER 1046
            H  TF M+  Q +T+WE+V+CPICL+ PHNGVLLQCSS+EKGCRPFVCDTDHLHSNCLER
Sbjct: 12   HPKTFNMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLER 71

Query: 1045 FKSAHGMLS-----GSSPSRASNATSLSVESTDMKDHEATEKPMCPLCRGEVTGWTIIDV 881
            FKSA+GM S      +S + A  A + S E+      ++  +P CPLCRGEVTGW ++D 
Sbjct: 72   FKSAYGMSSELKSPSTSDADADAAAAASAENIQQLSEDSC-RPTCPLCRGEVTGWIVVDK 130

Query: 880  ARVHLDVKKRRCEEEQCSFMGTYLELRQHAQLEHPHACPSKIDPARQLDWDNFQQSSEII 701
            AR  LD KKR C EE+C+FMGTYLELR HAQLEHPHA PSKIDPARQLDW+NFQQSSEII
Sbjct: 131  AREQLDEKKRCCAEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEII 190

Query: 700  DVLSTIHSEHPRGVVLGDYVIEYXXXXXXXXXXXFPRNEGNWWTSCLLYQVFDNFXXXXX 521
            DVLSTIHSE PRGVVLGDYVIEY           FP +EGNWWTSC+LYQVFDNF     
Sbjct: 191  DVLSTIHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRN 250

Query: 520  XXXXXXXXXXXXXXRLSYDTSNSDEGSVISI----------DDEFVGTFDLS-STTGHXX 374
                          R SYDTSNSDEGSV S+          DDE V T   S  +TGH  
Sbjct: 251  RRRARVSDARRGSRRSSYDTSNSDEGSVTSVEFPEYRADETDDELVSTSSGSRGSTGHRS 310

Query: 373  XXXXXXRFYDN 341
                  RFYDN
Sbjct: 311  SRRRRSRFYDN 321


>ref|XP_002527964.1| conserved hypothetical protein [Ricinus communis]
            gi|223532590|gb|EEF34376.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 311

 Score =  353 bits (906), Expect = 6e-95
 Identities = 185/305 (60%), Positives = 210/305 (68%), Gaps = 11/305 (3%)
 Frame = -1

Query: 1222 SSTFIMEIDQQNTDWENVSCPICLESPHNGVLLQCSSHEKGCRPFVCDTDHLHSNCLERF 1043
            +S+F ME  Q NT+WE V CPICL+ PHN VLLQCSS+EKGCRPFVCDTDHLHSNCL+RF
Sbjct: 13   ASSFNMEEIQLNTNWEEVVCPICLDFPHNSVLLQCSSYEKGCRPFVCDTDHLHSNCLDRF 72

Query: 1042 KSAHGMLSGSSPSRASNATSLSVESTDMKDHEATEKPMCPLCRGEVTGWTIIDVARVHLD 863
            KSA GM   SSPS +   T+ + + + +   +   +  CPLCRGEV+GW  I+ ARVHLD
Sbjct: 73   KSASGM---SSPSTSDATTTANTQHSVV---DGNSRLACPLCRGEVSGWVAIEKARVHLD 126

Query: 862  VKKRRCEEEQCSFMGTYLELRQHAQLEHPHACPSKIDPARQLDWDNFQQSSEIIDVLSTI 683
             KKR CEEEQC+F GTYLEL +HAQLEHPHA PSKIDPARQLDW+NFQQSSEIIDVLSTI
Sbjct: 127  EKKRCCEEEQCTFTGTYLELCKHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLSTI 186

Query: 682  HSEHPRGVVLGDYVIEYXXXXXXXXXXXFPRNEGNWWTSCLLYQVFDNFXXXXXXXXXXX 503
            HSE PRGVVLGDYVIEY           FP +EGNWWTSC+LYQVFDNF           
Sbjct: 187  HSEVPRGVVLGDYVIEYGDDDTVDEFEDFPGDEGNWWTSCILYQVFDNFRNSRNRRRSRV 246

Query: 502  XXXXXXXXRLSYDTSNSDEGSVISI----------DDEFVGTFDLS-STTGHXXXXXXXX 356
                    R+SYD SNSDEGSV S+          DDEF  T   S  ++GH        
Sbjct: 247  TDTRRGSRRMSYDNSNSDEGSVTSVEFAEYRLDETDDEFASTTGPSRGSSGHRSSRRRRS 306

Query: 355  RFYDN 341
            RFYDN
Sbjct: 307  RFYDN 311


>emb|CAN62770.1| hypothetical protein VITISV_027108 [Vitis vinifera]
          Length = 325

 Score =  352 bits (902), Expect = 2e-94
 Identities = 185/302 (61%), Positives = 208/302 (68%), Gaps = 20/302 (6%)
 Frame = -1

Query: 1225 HSSTFIMEIDQQNTDWENVSCPICLESPHNGVLLQCSSHEKGCRPFVCDTDHLHSNCLER 1046
            H  TF M+  Q +T+WE+V+CPICL+ PHNGVLLQCSS+EKGCRPFVCDTDHLHSNCL+R
Sbjct: 12   HPKTFNMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLDR 71

Query: 1045 FKSAHGMLSG-SSPSR--------ASNATSLSVESTDMKDHEATEKPMCPLCRGEVTGWT 893
            FKSA+GM S   SPS         A  A + S E+      ++  +P CPLCRGEVTGW 
Sbjct: 72   FKSAYGMSSELKSPSTSDADADADAEAAAAASAENIQQLSEDSC-RPTCPLCRGEVTGWI 130

Query: 892  IIDVARVHLDVKKRRCEEEQCSFMGTYLELRQHAQLEHPHACPSKIDPARQLDWDNFQQS 713
            ++D AR  LD KKR C EE+C+FMGTYLELR HAQLEHPHA PSKIDPARQLDW+NFQQS
Sbjct: 131  VVDKAREQLDEKKRCCAEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQS 190

Query: 712  SEIIDVLSTIHSEHPRGVVLGDYVIEYXXXXXXXXXXXFPRNEGNWWTSCLLYQVFDNFX 533
            SEIIDVLSTIHSE PRGVVLGDYVIEY           FP +EGNWWTSC+LYQVFDNF 
Sbjct: 191  SEIIDVLSTIHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFR 250

Query: 532  XXXXXXXXXXXXXXXXXXRLSYDTSNSDEGSVISI----------DDEFVGTFDLS-STT 386
                              R SYDTSNSDEGSV S+          DDE V T   S  +T
Sbjct: 251  ASRNRRRSRVSDARRGSRRSSYDTSNSDEGSVTSVEFPEYRADETDDELVSTSSGSRGST 310

Query: 385  GH 380
            GH
Sbjct: 311  GH 312


>emb|CBI20773.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  350 bits (899), Expect = 4e-94
 Identities = 184/306 (60%), Positives = 202/306 (66%), Gaps = 11/306 (3%)
 Frame = -1

Query: 1225 HSSTFIMEIDQQNTDWENVSCPICLESPHNGVLLQCSSHEKGCRPFVCDTDHLHSNCLER 1046
            H  TF M+  Q +T+WE+V+CPICL+ PHNGVLLQCSS+EKGCRPFVCDTDHLHSNCLER
Sbjct: 12   HPKTFNMDNVQLDTNWEDVTCPICLDFPHNGVLLQCSSYEKGCRPFVCDTDHLHSNCLER 71

Query: 1045 FKSAHGMLSGSSPSRASNATSLSVESTDMKDHEATEKPMCPLCRGEVTGWTIIDVARVHL 866
            FKSA+GM S                           +P CPLCRGEVTGW ++D AR  L
Sbjct: 72   FKSAYGMSSDC-------------------------RPTCPLCRGEVTGWIVVDKAREQL 106

Query: 865  DVKKRRCEEEQCSFMGTYLELRQHAQLEHPHACPSKIDPARQLDWDNFQQSSEIIDVLST 686
            D KKR C EE+C+FMGTYLELR HAQLEHPHA PSKIDPARQLDW+NFQQSSEIIDVLST
Sbjct: 107  DEKKRCCAEERCAFMGTYLELRNHAQLEHPHARPSKIDPARQLDWENFQQSSEIIDVLST 166

Query: 685  IHSEHPRGVVLGDYVIEYXXXXXXXXXXXFPRNEGNWWTSCLLYQVFDNFXXXXXXXXXX 506
            IHSE PRGVVLGDYVIEY           FP +EGNWWTSC+LYQVFDNF          
Sbjct: 167  IHSEVPRGVVLGDYVIEYGDDETGDEFEDFPGDEGNWWTSCILYQVFDNFRASRNRRRAR 226

Query: 505  XXXXXXXXXRLSYDTSNSDEGSVISI----------DDEFVGTFDLS-STTGHXXXXXXX 359
                     R SYDTSNSDEGSV S+          DDE V T   S  +TGH       
Sbjct: 227  VSDARRGSRRSSYDTSNSDEGSVTSVEFPEYRADETDDELVSTSSGSRGSTGHRSSRRRR 286

Query: 358  XRFYDN 341
             RFYDN
Sbjct: 287  SRFYDN 292


>ref|XP_002330810.1| predicted protein [Populus trichocarpa] gi|222872612|gb|EEF09743.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  339 bits (869), Expect = 1e-90
 Identities = 177/306 (57%), Positives = 205/306 (66%), Gaps = 13/306 (4%)
 Frame = -1

Query: 1222 SSTFIMEIDQQNTDWENVSCPICLESPHNGVLLQCSSHEKGCRPFVCDTDHLHSNCLERF 1043
            ++T  +E  Q NT+WE+V CPICL+ PHN VLLQCSS++KGC+PFVCDTDHLHSNCL RF
Sbjct: 13   ANTINIEDIQLNTNWEDVICPICLDFPHNCVLLQCSSYDKGCQPFVCDTDHLHSNCLGRF 72

Query: 1042 KSAHGMLSGSS--PSRASNATSLSVESTDMKDHEATEKPMCPLCRGEVTGWTIIDVARVH 869
            KSA G+ S S+  P+ A+N      +S          K +CPLCRGEV GW ++D AR+H
Sbjct: 73   KSASGLSSPSTSDPTPATNTQPAVADSNS--------KLVCPLCRGEVIGWVVVDKARLH 124

Query: 868  LDVKKRRCEEEQCSFMGTYLELRQHAQLEHPHACPSKIDPARQLDWDNFQQSSEIIDVLS 689
            LD KKR C EEQC+FMGTY EL +HAQ+EHPHA PSKIDPARQLDW+NFQQSSEIIDVLS
Sbjct: 125  LDEKKRCCAEEQCTFMGTYFELHEHAQIEHPHARPSKIDPARQLDWENFQQSSEIIDVLS 184

Query: 688  TIHSEHPRGVVLGDYVIEYXXXXXXXXXXXFPRNEGNWWTSCLLYQVFDNFXXXXXXXXX 509
            TIHSE PRG+VLGDYVIEY           FP +EGNWWTSC+LYQVFDNF         
Sbjct: 185  TIHSEVPRGIVLGDYVIEYGDDDTGDEFEDFPGDEGNWWTSCILYQVFDNFRNSRNRRRA 244

Query: 508  XXXXXXXXXXRLSYDTSNSDEGSVISID------DEFVGTFDLSS-----TTGHXXXXXX 362
                        SYDTSNSDEGSV S+D      DE    F  SS     ++GH      
Sbjct: 245  RIADTRRGSRHSSYDTSNSDEGSVTSVDFAEYRLDETDDEFPSSSVSSRGSSGHRSSRRR 304

Query: 361  XXRFYD 344
              RFYD
Sbjct: 305  RSRFYD 310


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