BLASTX nr result

ID: Bupleurum21_contig00002447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002447
         (1137 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265093.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   206   1e-69
emb|CBI22797.3| unnamed protein product [Vitis vinifera]              202   1e-68
ref|XP_003632580.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   206   2e-68
ref|XP_003632579.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   206   6e-67
ref|XP_003632581.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 i...   206   5e-66

>ref|XP_002265093.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 1 [Vitis
           vinifera]
          Length = 243

 Score =  206 bits (525), Expect(2) = 1e-69
 Identities = 98/129 (75%), Positives = 108/129 (83%)
 Frame = +3

Query: 498 MEMASISSTPRTVEEIFKDYNGRRSGIVRALSFDVDEFYGICDPEKENLCLYGHPNETWX 677
           MEMASISS+PRTVEEIFKDY+GRR+G+VRAL++DVDEFY +CDPEKENLCLYGHPN+TW 
Sbjct: 1   MEMASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWE 60

Query: 678 XXXXXXXXXXXXXXXXXGINFARDGMNRKDWLSLVAVHSDCWLLSVAFYLGARLNRNERK 857
                            GINFARDGMNRKDWLSLVAVHSD WLLS AFYLGARLNRNERK
Sbjct: 61  VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERK 120

Query: 858 RLFSLINEL 884
           RLFS+IN+L
Sbjct: 121 RLFSMINDL 129



 Score = 84.7 bits (208), Expect(2) = 1e-69
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = +2

Query: 938  FSLINELPTVFEVVTERKTVKEKPSGDSGSKTRVSTKRSNDGQVKSIPKIA 1090
            FS+IN+LPTVFEVVTERK +K+KPS DSGSK+RVSTKR N+GQVKS PK+A
Sbjct: 123  FSMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLA 173


>emb|CBI22797.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  202 bits (515), Expect(2) = 1e-68
 Identities = 96/127 (75%), Positives = 106/127 (83%)
 Frame = +3

Query: 504 MASISSTPRTVEEIFKDYNGRRSGIVRALSFDVDEFYGICDPEKENLCLYGHPNETWXXX 683
           MASISS+PRTVEEIFKDY+GRR+G+VRAL++DVDEFY +CDPEKENLCLYGHPN+TW   
Sbjct: 1   MASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWEVT 60

Query: 684 XXXXXXXXXXXXXXXGINFARDGMNRKDWLSLVAVHSDCWLLSVAFYLGARLNRNERKRL 863
                          GINFARDGMNRKDWLSLVAVHSD WLLS AFYLGARLNRNERKRL
Sbjct: 61  LPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERKRL 120

Query: 864 FSLINEL 884
           FS+IN+L
Sbjct: 121 FSMINDL 127



 Score = 84.7 bits (208), Expect(2) = 1e-68
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = +2

Query: 938  FSLINELPTVFEVVTERKTVKEKPSGDSGSKTRVSTKRSNDGQVKSIPKIA 1090
            FS+IN+LPTVFEVVTERK +K+KPS DSGSK+RVSTKR N+GQVKS PK+A
Sbjct: 121  FSMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKRGNEGQVKSTPKLA 171


>ref|XP_003632580.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 3 [Vitis
           vinifera]
          Length = 244

 Score =  206 bits (525), Expect(2) = 2e-68
 Identities = 98/129 (75%), Positives = 108/129 (83%)
 Frame = +3

Query: 498 MEMASISSTPRTVEEIFKDYNGRRSGIVRALSFDVDEFYGICDPEKENLCLYGHPNETWX 677
           MEMASISS+PRTVEEIFKDY+GRR+G+VRAL++DVDEFY +CDPEKENLCLYGHPN+TW 
Sbjct: 1   MEMASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWE 60

Query: 678 XXXXXXXXXXXXXXXXXGINFARDGMNRKDWLSLVAVHSDCWLLSVAFYLGARLNRNERK 857
                            GINFARDGMNRKDWLSLVAVHSD WLLS AFYLGARLNRNERK
Sbjct: 61  VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERK 120

Query: 858 RLFSLINEL 884
           RLFS+IN+L
Sbjct: 121 RLFSMINDL 129



 Score = 80.1 bits (196), Expect(2) = 2e-68
 Identities = 40/52 (76%), Positives = 47/52 (90%), Gaps = 1/52 (1%)
 Frame = +2

Query: 938  FSLINELPTVFEVVTERKTVKEKPSGDSGSKTRVSTK-RSNDGQVKSIPKIA 1090
            FS+IN+LPTVFEVVTERK +K+KPS DSGSK+RVSTK R N+GQVKS PK+A
Sbjct: 123  FSMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKVRGNEGQVKSTPKLA 174


>ref|XP_003632579.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 2 [Vitis
           vinifera]
          Length = 250

 Score =  206 bits (525), Expect(2) = 6e-67
 Identities = 98/129 (75%), Positives = 108/129 (83%)
 Frame = +3

Query: 498 MEMASISSTPRTVEEIFKDYNGRRSGIVRALSFDVDEFYGICDPEKENLCLYGHPNETWX 677
           MEMASISS+PRTVEEIFKDY+GRR+G+VRAL++DVDEFY +CDPEKENLCLYGHPN+TW 
Sbjct: 1   MEMASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWE 60

Query: 678 XXXXXXXXXXXXXXXXXGINFARDGMNRKDWLSLVAVHSDCWLLSVAFYLGARLNRNERK 857
                            GINFARDGMNRKDWLSLVAVHSD WLLS AFYLGARLNRNERK
Sbjct: 61  VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERK 120

Query: 858 RLFSLINEL 884
           RLFS+IN+L
Sbjct: 121 RLFSMINDL 129



 Score = 75.5 bits (184), Expect(2) = 6e-67
 Identities = 39/58 (67%), Positives = 46/58 (79%), Gaps = 7/58 (12%)
 Frame = +2

Query: 938  FSLINELPTVFEVVTERKTVKEKPSGDSGSKTRVSTK-------RSNDGQVKSIPKIA 1090
            FS+IN+LPTVFEVVTERK +K+KPS DSGSK+RVSTK         N+GQVKS PK+A
Sbjct: 123  FSMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKVRWIKLDMGNEGQVKSTPKLA 180


>ref|XP_003632581.1| PREDICTED: PHD finger protein ALFIN-LIKE 1 isoform 4 [Vitis
           vinifera]
          Length = 245

 Score =  206 bits (525), Expect(2) = 5e-66
 Identities = 98/129 (75%), Positives = 108/129 (83%)
 Frame = +3

Query: 498 MEMASISSTPRTVEEIFKDYNGRRSGIVRALSFDVDEFYGICDPEKENLCLYGHPNETWX 677
           MEMASISS+PRTVEEIFKDY+GRR+G+VRAL++DVDEFY +CDPEKENLCLYGHPN+TW 
Sbjct: 1   MEMASISSSPRTVEEIFKDYSGRRAGVVRALTYDVDEFYKLCDPEKENLCLYGHPNDTWE 60

Query: 678 XXXXXXXXXXXXXXXXXGINFARDGMNRKDWLSLVAVHSDCWLLSVAFYLGARLNRNERK 857
                            GINFARDGMNRKDWLSLVAVHSD WLLS AFYLGARLNRNERK
Sbjct: 61  VTLPAEEVPPELPEPALGINFARDGMNRKDWLSLVAVHSDSWLLSAAFYLGARLNRNERK 120

Query: 858 RLFSLINEL 884
           RLFS+IN+L
Sbjct: 121 RLFSMINDL 129



 Score = 72.4 bits (176), Expect(2) = 5e-66
 Identities = 38/53 (71%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
 Frame = +2

Query: 938  FSLINELPTVFEVVTERKTVKEKPSGDSGSKTRVSTKRS--NDGQVKSIPKIA 1090
            FS+IN+LPTVFEVVTERK +K+KPS DSGSK+RVSTK S  +  QVKS PK+A
Sbjct: 123  FSMINDLPTVFEVVTERKPIKDKPSVDSGSKSRVSTKHSMKDVWQVKSTPKLA 175


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