BLASTX nr result

ID: Bupleurum21_contig00002440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002440
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|g...   186   2e-45
ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-li...   185   3e-45
ref|XP_002875360.1| CLC-B [Arabidopsis lyrata subsp. lyrata] gi|...   184   5e-45
ref|NP_189353.1| chloride channel protein CLC-b [Arabidopsis tha...   184   5e-45
ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|22...   184   9e-45

>ref|NP_001236494.1| chloride channel [Glycine max] gi|66220164|gb|AAY43007.1| chloride
           channel [Glycine max]
          Length = 783

 Score =  186 bits (472), Expect = 2e-45
 Identities = 88/95 (92%), Positives = 91/95 (95%)
 Frame = +1

Query: 4   NFLLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGL 183
           NFLLT VAS+LCVCFAPTAAGPGIPEIKAYLNGVDTPNM+GATTL VKI+GSIGAVSAGL
Sbjct: 144 NFLLTFVASILCVCFAPTAAGPGIPEIKAYLNGVDTPNMYGATTLFVKIIGSIGAVSAGL 203

Query: 184 DLGKEGPLVHIGSCIASLLGQGGTDNYRSKWRWLR 288
           DLGKEGPLVHIGSCIASLLGQGG DNYR KWRWLR
Sbjct: 204 DLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLR 238


>ref|XP_003553925.1| PREDICTED: chloride channel protein CLC-b-like [Glycine max]
          Length = 790

 Score =  185 bits (470), Expect = 3e-45
 Identities = 87/95 (91%), Positives = 92/95 (96%)
 Frame = +1

Query: 4   NFLLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAGL 183
           NF+LT VA++LCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTL+VKI+GSIGAVSAGL
Sbjct: 145 NFVLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLIVKIIGSIGAVSAGL 204

Query: 184 DLGKEGPLVHIGSCIASLLGQGGTDNYRSKWRWLR 288
           DLGKEGPLVHIGSCIASLLGQGG DNYR KWRWLR
Sbjct: 205 DLGKEGPLVHIGSCIASLLGQGGPDNYRIKWRWLR 239


>ref|XP_002875360.1| CLC-B [Arabidopsis lyrata subsp. lyrata]
           gi|297321198|gb|EFH51619.1| CLC-B [Arabidopsis lyrata
           subsp. lyrata]
          Length = 779

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/96 (92%), Positives = 93/96 (96%)
 Frame = +1

Query: 1   ANFLLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAG 180
           AN  LTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATT++VKIVGSIGAV+AG
Sbjct: 136 ANLGLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAG 195

Query: 181 LDLGKEGPLVHIGSCIASLLGQGGTDNYRSKWRWLR 288
           LDLGKEGPLVHIGSCIASLLGQGGTDN+R KWRWLR
Sbjct: 196 LDLGKEGPLVHIGSCIASLLGQGGTDNHRIKWRWLR 231


>ref|NP_189353.1| chloride channel protein CLC-b [Arabidopsis thaliana]
           gi|41688457|sp|P92942.1|CLCB_ARATH RecName:
           Full=Chloride channel protein CLC-b; Short=AtCLC-b;
           AltName: Full=CBS domain-containing protein CBSCLC7
           gi|1742955|emb|CAA96058.1| CLC-b chloride channel
           protein [Arabidopsis thaliana]
           gi|9294082|dbj|BAB01934.1| CLC-d chloride channel; anion
           channel protein [Arabidopsis thaliana]
           gi|17064884|gb|AAL32596.1| CLC-d chloride channel; anion
           channel protein [Arabidopsis thaliana]
           gi|332643754|gb|AEE77275.1| chloride channel protein
           CLC-b [Arabidopsis thaliana]
          Length = 780

 Score =  184 bits (468), Expect = 5e-45
 Identities = 89/96 (92%), Positives = 93/96 (96%)
 Frame = +1

Query: 1   ANFLLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAG 180
           AN  LTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATT++VKIVGSIGAV+AG
Sbjct: 137 ANLGLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIVGSIGAVAAG 196

Query: 181 LDLGKEGPLVHIGSCIASLLGQGGTDNYRSKWRWLR 288
           LDLGKEGPLVHIGSCIASLLGQGGTDN+R KWRWLR
Sbjct: 197 LDLGKEGPLVHIGSCIASLLGQGGTDNHRIKWRWLR 232


>ref|XP_002300101.1| Cl-channel clc-7 [Populus trichocarpa] gi|222847359|gb|EEE84906.1|
           Cl-channel clc-7 [Populus trichocarpa]
          Length = 785

 Score =  184 bits (466), Expect = 9e-45
 Identities = 89/96 (92%), Positives = 90/96 (93%)
 Frame = +1

Query: 1   ANFLLTLVASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTLMVKIVGSIGAVSAG 180
           AN LLTL ASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFG TTL+VKI GSIGAVSAG
Sbjct: 141 ANLLLTLFASVLCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGVTTLIVKIFGSIGAVSAG 200

Query: 181 LDLGKEGPLVHIGSCIASLLGQGGTDNYRSKWRWLR 288
           LDLGKEGPLVHIGSCIASLLGQGG DNYR KWRWLR
Sbjct: 201 LDLGKEGPLVHIGSCIASLLGQGGPDNYRLKWRWLR 236


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