BLASTX nr result

ID: Bupleurum21_contig00002439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002439
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07
gb|ABK94808.1| unknown [Populus trichocarpa]                           61   1e-07
ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206...    60   2e-07
dbj|BAH57143.1| AT3G54680 [Arabidopsis thaliana]                       58   7e-07
emb|CAB77588.1| putative protein [Arabidopsis thaliana]                58   7e-07

>ref|XP_002327309.1| predicted protein [Populus trichocarpa] gi|222835679|gb|EEE74114.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
 Frame = +2

Query: 59  PTRSKSDTNSDSFSLRPLGRTGGSVVPVS--------RDLCSV--SPKPDRFVPPHLRPG 208
           P +++++  SD  SLRPLGRTG   +  S        +++ S   SPK D+FVPPHLRPG
Sbjct: 46  PVQTEAEPESDRISLRPLGRTGAGSIASSPVHGQEKQKEVGSSVGSPKSDKFVPPHLRPG 105

Query: 209 YVCKEEKP 232
           +V +EEKP
Sbjct: 106 FVGREEKP 113


>gb|ABK94808.1| unknown [Populus trichocarpa]
          Length = 238

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 10/68 (14%)
 Frame = +2

Query: 59  PTRSKSDTNSDSFSLRPLGRTGGSVVPVS--------RDLCSV--SPKPDRFVPPHLRPG 208
           P +++++  SD  SLRPLGRTG   +  S        +++ S   SPK D+FVPPHLRPG
Sbjct: 107 PVQTEAEPESDRISLRPLGRTGAGSIASSPVHGQEKQKEVGSSVGSPKSDKFVPPHLRPG 166

Query: 209 YVCKEEKP 232
           +V +EEKP
Sbjct: 167 FVGREEKP 174


>ref|XP_004144518.1| PREDICTED: uncharacterized protein LOC101206223 [Cucumis sativus]
           gi|449508868|ref|XP_004163431.1| PREDICTED:
           uncharacterized protein LOC101231399 [Cucumis sativus]
          Length = 229

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/71 (50%), Positives = 44/71 (61%), Gaps = 11/71 (15%)
 Frame = +2

Query: 53  PDPTRSKSDTNSDSFSLRPLGRTGG-----SVVPVSRDLCSVSP------KPDRFVPPHL 199
           PD  R +SD  SDS SLRPLGRTG      S +PV      ++P      KP++FVPPHL
Sbjct: 96  PDHPRPQSD--SDSISLRPLGRTGTGAIAPSPIPVLEKDREITPPVVTLHKPEKFVPPHL 153

Query: 200 RPGYVCKEEKP 232
           R G+V KEE+P
Sbjct: 154 RAGFVGKEERP 164


>dbj|BAH57143.1| AT3G54680 [Arabidopsis thaliana]
          Length = 191

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 15/68 (22%)
 Frame = +2

Query: 74  SDTNSDSFSLRPLGRTGGSV---VPV------------SRDLCSVSPKPDRFVPPHLRPG 208
           SD +    SLRPLG TG S     P+            +    S+SPKPDRFVPPHLRPG
Sbjct: 64  SDPDPSQISLRPLGHTGSSSSLSFPIRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPG 123

Query: 209 YVCKEEKP 232
           +V K+EKP
Sbjct: 124 FVRKDEKP 131


>emb|CAB77588.1| putative protein [Arabidopsis thaliana]
          Length = 259

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 15/68 (22%)
 Frame = +2

Query: 74  SDTNSDSFSLRPLGRTGGSV---VPV------------SRDLCSVSPKPDRFVPPHLRPG 208
           SD +    SLRPLG TG S     P+            +    S+SPKPDRFVPPHLRPG
Sbjct: 84  SDPDPSQISLRPLGHTGSSSSLSFPIRTPEINKAPEVNAPTPVSLSPKPDRFVPPHLRPG 143

Query: 209 YVCKEEKP 232
           +V K+EKP
Sbjct: 144 FVRKDEKP 151


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