BLASTX nr result

ID: Bupleurum21_contig00002431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002431
         (793 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA03413.1| EDGP precursor [Daucus carota]                        452   e-125
pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|p...   452   e-125
pdb|3VLA|A Chain A, Crystal Structure Of Edgp                         450   e-124
ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera]     366   3e-99
emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera]   366   3e-99

>dbj|BAA03413.1| EDGP precursor [Daucus carota]
          Length = 433

 Score =  452 bits (1162), Expect = e-125
 Identities = 223/262 (85%), Positives = 237/262 (90%)
 Frame = -3

Query: 791 QPSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVADLGGRFLWVDCDNNYVSSTYR 612
           QPSFRP ALVVPVKKDASTLQYVT INQRTPLVS NLV DLGGRFLWVDCD NYVSSTYR
Sbjct: 21  QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYR 80

Query: 611 PVQCRTSQCSLAGSISCGDCFNGPRPGCNNNTCGVFPENPVINTATGGELAEDVVSIQST 432
           PV+CRTSQCSL+GSI+CGDCFNGPRPGCNNNTCGVFPENPVINTATGGE+AEDVVS++ST
Sbjct: 81  PVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVEST 140

Query: 431 DGSNPGQVVTVPRFLFSCAPSFLLQNLASGVTGMAGFGRTRIALXXXXXXXXXFNRKFAM 252
           DGS+ G+VVTVPRF+FSCAP+ LLQNLASGV GMAG GRTRIAL         F RKFAM
Sbjct: 141 DGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAM 200

Query: 251 CLSSSTSSNGVIFIGNDPYRFLPNIVVSDQTLTYTPLLTNPVSTAATSTQGEPSVEYFIG 72
           CLS STSSN VI  GNDPY FLPNI+VSD+TLTYTPLLTNPVST+ATSTQGEPSVEYFIG
Sbjct: 201 CLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 260

Query: 71  VKSIRINSNIVALNTSLLSISS 6
           VKSI+INS IVALNTSLLSISS
Sbjct: 261 VKSIKINSKIVALNTSLLSISS 282


>pdb|3VLB|A Chain A, Crystal Structure Of Xeg-Edgp gi|384482420|pdb|3VLB|C
           Chain C, Crystal Structure Of Xeg-Edgp
          Length = 413

 Score =  452 bits (1162), Expect = e-125
 Identities = 223/262 (85%), Positives = 237/262 (90%)
 Frame = -3

Query: 791 QPSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVADLGGRFLWVDCDNNYVSSTYR 612
           QPSFRP ALVVPVKKDASTLQYVT INQRTPLVS NLV DLGGRFLWVDCD NYVSSTYR
Sbjct: 1   QPSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYR 60

Query: 611 PVQCRTSQCSLAGSISCGDCFNGPRPGCNNNTCGVFPENPVINTATGGELAEDVVSIQST 432
           PV+CRTSQCSL+GSI+CGDCFNGPRPGCNNNTCGVFPENPVINTATGGE+AEDVVS++ST
Sbjct: 61  PVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVEST 120

Query: 431 DGSNPGQVVTVPRFLFSCAPSFLLQNLASGVTGMAGFGRTRIALXXXXXXXXXFNRKFAM 252
           DGS+ G+VVTVPRF+FSCAP+ LLQNLASGV GMAG GRTRIAL         F RKFAM
Sbjct: 121 DGSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAM 180

Query: 251 CLSSSTSSNGVIFIGNDPYRFLPNIVVSDQTLTYTPLLTNPVSTAATSTQGEPSVEYFIG 72
           CLS STSSN VI  GNDPY FLPNI+VSD+TLTYTPLLTNPVST+ATSTQGEPSVEYFIG
Sbjct: 181 CLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIG 240

Query: 71  VKSIRINSNIVALNTSLLSISS 6
           VKSI+INS IVALNTSLLSISS
Sbjct: 241 VKSIKINSKIVALNTSLLSISS 262


>pdb|3VLA|A Chain A, Crystal Structure Of Edgp
          Length = 413

 Score =  450 bits (1157), Expect = e-124
 Identities = 222/261 (85%), Positives = 236/261 (90%)
 Frame = -3

Query: 788 PSFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVADLGGRFLWVDCDNNYVSSTYRP 609
           PSFRP ALVVPVKKDASTLQYVT INQRTPLVS NLV DLGGRFLWVDCD NYVSSTYRP
Sbjct: 2   PSFRPSALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRP 61

Query: 608 VQCRTSQCSLAGSISCGDCFNGPRPGCNNNTCGVFPENPVINTATGGELAEDVVSIQSTD 429
           V+CRTSQCSL+GSI+CGDCFNGPRPGCNNNTCGVFPENPVINTATGGE+AEDVVS++STD
Sbjct: 62  VRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTD 121

Query: 428 GSNPGQVVTVPRFLFSCAPSFLLQNLASGVTGMAGFGRTRIALXXXXXXXXXFNRKFAMC 249
           GS+ G+VVTVPRF+FSCAP+ LLQNLASGV GMAG GRTRIAL         F RKFAMC
Sbjct: 122 GSSSGRVVTVPRFIFSCAPTSLLQNLASGVVGMAGLGRTRIALPSQFASAFSFKRKFAMC 181

Query: 248 LSSSTSSNGVIFIGNDPYRFLPNIVVSDQTLTYTPLLTNPVSTAATSTQGEPSVEYFIGV 69
           LS STSSN VI  GNDPY FLPNI+VSD+TLTYTPLLTNPVST+ATSTQGEPSVEYFIGV
Sbjct: 182 LSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVEYFIGV 241

Query: 68  KSIRINSNIVALNTSLLSISS 6
           KSI+INS IVALNTSLLSISS
Sbjct: 242 KSIKINSKIVALNTSLLSISS 262


>ref|XP_002272235.1| PREDICTED: basic 7S globulin [Vitis vinifera]
          Length = 436

 Score =  366 bits (940), Expect = 3e-99
 Identities = 181/261 (69%), Positives = 207/261 (79%)
 Frame = -3

Query: 785 SFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVADLGGRFLWVDCDNNYVSSTYRPV 606
           SFRP ALV+PV KDASTLQY+T INQRTPLV   LV DLG +FLWVDC+ NYVSS+YRP 
Sbjct: 25  SFRPDALVIPVSKDASTLQYLTTINQRTPLVPVKLVVDLGAQFLWVDCEQNYVSSSYRPA 84

Query: 605 QCRTSQCSLAGSISCGDCFNGPRPGCNNNTCGVFPENPVINTATGGELAEDVVSIQSTDG 426
           +CR++QCSLA +  CGDCF+ PRPGCNNNTCGV P+N V  TAT GELAED VS+QSTDG
Sbjct: 85  RCRSAQCSLARANGCGDCFSAPRPGCNNNTCGVLPDNTVTRTATSGELAEDFVSVQSTDG 144

Query: 425 SNPGQVVTVPRFLFSCAPSFLLQNLASGVTGMAGFGRTRIALXXXXXXXXXFNRKFAMCL 246
           SNPG+VV+V +FLFSCAP+FLL+ LAS   GMAG GRTRIA          F+RKFA CL
Sbjct: 145 SNPGRVVSVSKFLFSCAPTFLLEGLASSAMGMAGLGRTRIAFPSQFASAFSFHRKFATCL 204

Query: 245 SSSTSSNGVIFIGNDPYRFLPNIVVSDQTLTYTPLLTNPVSTAATSTQGEPSVEYFIGVK 66
           SSST++NGV+F G+ PYR LPNI  S Q+L YTPL  NPVSTA+  TQGEPS EYFI VK
Sbjct: 205 SSSTTANGVVFFGDGPYRLLPNIDAS-QSLIYTPLYINPVSTASAYTQGEPSAEYFIRVK 263

Query: 65  SIRINSNIVALNTSLLSISSE 3
           SIRIN   ++LNTSLLSI SE
Sbjct: 264 SIRINEKAISLNTSLLSIDSE 284


>emb|CAN80378.1| hypothetical protein VITISV_038701 [Vitis vinifera]
          Length = 436

 Score =  366 bits (940), Expect = 3e-99
 Identities = 181/261 (69%), Positives = 207/261 (79%)
 Frame = -3

Query: 785 SFRPKALVVPVKKDASTLQYVTKINQRTPLVSTNLVADLGGRFLWVDCDNNYVSSTYRPV 606
           SFRP ALV+PV KDASTLQY+T INQRTPLV   LV DLG +FLWVDC+ NYVSS+YRP 
Sbjct: 25  SFRPDALVIPVSKDASTLQYLTTINQRTPLVPVKLVVDLGAQFLWVDCEQNYVSSSYRPA 84

Query: 605 QCRTSQCSLAGSISCGDCFNGPRPGCNNNTCGVFPENPVINTATGGELAEDVVSIQSTDG 426
           +CR++QCSLA +  CGDCF+ PRPGCNNNTCGV P+N V  TAT GELAED VS+QSTDG
Sbjct: 85  RCRSAQCSLARANGCGDCFSAPRPGCNNNTCGVLPDNTVTRTATSGELAEDFVSVQSTDG 144

Query: 425 SNPGQVVTVPRFLFSCAPSFLLQNLASGVTGMAGFGRTRIALXXXXXXXXXFNRKFAMCL 246
           SNPG+VV+V +FLFSCAP+FLL+ LAS   GMAG GRTRIA          F+RKFA CL
Sbjct: 145 SNPGRVVSVSKFLFSCAPTFLLEGLASSAMGMAGLGRTRIAFPSQFASAFSFHRKFATCL 204

Query: 245 SSSTSSNGVIFIGNDPYRFLPNIVVSDQTLTYTPLLTNPVSTAATSTQGEPSVEYFIGVK 66
           SSST++NGV+F G+ PYR LPNI  S Q+L YTPL  NPVSTA+  TQGEPS EYFI VK
Sbjct: 205 SSSTTANGVVFFGDGPYRLLPNIDAS-QSLIYTPLYINPVSTASAYTQGEPSAEYFIRVK 263

Query: 65  SIRINSNIVALNTSLLSISSE 3
           SIRIN   ++LNTSLLSI SE
Sbjct: 264 SIRINEKAISLNTSLLSIDSE 284


Top