BLASTX nr result

ID: Bupleurum21_contig00002414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002414
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|2...   194   1e-47
ref|XP_004137675.1| PREDICTED: elongation factor P-like [Cucumis...   194   2e-47
ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinife...   190   2e-46
gb|AAG51354.1|AC012562_15 putative elongation factor P (EF-P); 6...   189   4e-46
ref|NP_566333.1| elongation factor EF-P [Arabidopsis thaliana] g...   189   4e-46

>ref|XP_002323076.1| predicted protein [Populus trichocarpa] gi|222867706|gb|EEF04837.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  194 bits (493), Expect = 1e-47
 Identities = 91/112 (81%), Positives = 103/112 (91%)
 Frame = +3

Query: 3   TYKDGPQFVFMDLTTYEEFRLNASDVGDKEKWLKEGMDCILLFWNGKVIDFDLPINVKLK 182
           TYKDG QFVFMDL+T+EE+RLN +DVGDK KWLKEGMDC LLFWNGKVIDF+LPI V+L 
Sbjct: 73  TYKDGVQFVFMDLSTFEEYRLNEADVGDKTKWLKEGMDCNLLFWNGKVIDFELPITVQLT 132

Query: 183 VVDVDPGLKGDTAQGGSKPATLETGAIVNVPLFVEKGQQIVVDTRSGQYMSR 338
           VVDVDPGLKGDTAQGG+KPATL+TGA+VNVPLFV  G +I+VDTR+GQYMSR
Sbjct: 133 VVDVDPGLKGDTAQGGTKPATLDTGAVVNVPLFVNIGAEILVDTRTGQYMSR 184


>ref|XP_004137675.1| PREDICTED: elongation factor P-like [Cucumis sativus]
           gi|449523916|ref|XP_004168969.1| PREDICTED: elongation
           factor P-like [Cucumis sativus]
          Length = 235

 Score =  194 bits (492), Expect = 2e-47
 Identities = 89/112 (79%), Positives = 101/112 (90%)
 Frame = +3

Query: 3   TYKDGPQFVFMDLTTYEEFRLNASDVGDKEKWLKEGMDCILLFWNGKVIDFDLPINVKLK 182
           TYKDG QFVFMDL TYEE RLNA+DVGD+ KWLKEGMDCI+LFWNGKVIDF++PI ++L 
Sbjct: 123 TYKDGSQFVFMDLNTYEEIRLNAADVGDRTKWLKEGMDCIVLFWNGKVIDFEVPITIQLT 182

Query: 183 VVDVDPGLKGDTAQGGSKPATLETGAIVNVPLFVEKGQQIVVDTRSGQYMSR 338
           VVDVDPGLKGDTAQGGSKPATLETGA+V+VPLF+  G  IV+DTR+GQY SR
Sbjct: 183 VVDVDPGLKGDTAQGGSKPATLETGAVVSVPLFINVGDSIVIDTRTGQYTSR 234


>ref|XP_002267558.1| PREDICTED: elongation factor P [Vitis vinifera]
           gi|297735541|emb|CBI18035.3| unnamed protein product
           [Vitis vinifera]
          Length = 236

 Score =  190 bits (482), Expect = 2e-46
 Identities = 87/112 (77%), Positives = 101/112 (90%)
 Frame = +3

Query: 3   TYKDGPQFVFMDLTTYEEFRLNASDVGDKEKWLKEGMDCILLFWNGKVIDFDLPINVKLK 182
           TYKDG QFVFMDL+T+EE RLN SDVG++ KWLKEGMDC +LFWNGK+IDF+LPI +KL 
Sbjct: 124 TYKDGAQFVFMDLSTFEEIRLNESDVGERTKWLKEGMDCNVLFWNGKIIDFELPITIKLT 183

Query: 183 VVDVDPGLKGDTAQGGSKPATLETGAIVNVPLFVEKGQQIVVDTRSGQYMSR 338
           VVDVDPG+KGDTAQGGSKPATL+TGA+VNVPLFV  G QI+VDTR+G+Y SR
Sbjct: 184 VVDVDPGIKGDTAQGGSKPATLDTGAVVNVPLFVNIGDQILVDTRTGEYRSR 235


>gb|AAG51354.1|AC012562_15 putative elongation factor P (EF-P); 66839-65711 [Arabidopsis
           thaliana]
          Length = 184

 Score =  189 bits (480), Expect = 4e-46
 Identities = 89/112 (79%), Positives = 99/112 (88%)
 Frame = +3

Query: 3   TYKDGPQFVFMDLTTYEEFRLNASDVGDKEKWLKEGMDCILLFWNGKVIDFDLPINVKLK 182
           TYKDG QFVFMDLTTYEE RLN SD+G+K KWLKEGMDCILL+W  KVIDFDLPI VKLK
Sbjct: 72  TYKDGSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLK 131

Query: 183 VVDVDPGLKGDTAQGGSKPATLETGAIVNVPLFVEKGQQIVVDTRSGQYMSR 338
           VVDVDPGL+GDT QGGSKPAT+ETGAIV VPLF+  G++I VDTR+G YM+R
Sbjct: 132 VVDVDPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNR 183


>ref|NP_566333.1| elongation factor EF-P [Arabidopsis thaliana]
           gi|17380806|gb|AAL36090.1| putative elongation factor P
           (EF-P) [Arabidopsis thaliana] gi|21436359|gb|AAM51349.1|
           putative elongation factor P (EF-P) [Arabidopsis
           thaliana] gi|21592331|gb|AAM64282.1| putative elongation
           factor P (EF-P) [Arabidopsis thaliana]
           gi|332641151|gb|AEE74672.1| elongation factor EF-P
           [Arabidopsis thaliana]
          Length = 236

 Score =  189 bits (480), Expect = 4e-46
 Identities = 89/112 (79%), Positives = 99/112 (88%)
 Frame = +3

Query: 3   TYKDGPQFVFMDLTTYEEFRLNASDVGDKEKWLKEGMDCILLFWNGKVIDFDLPINVKLK 182
           TYKDG QFVFMDLTTYEE RLN SD+G+K KWLKEGMDCILL+W  KVIDFDLPI VKLK
Sbjct: 124 TYKDGSQFVFMDLTTYEETRLNESDMGEKTKWLKEGMDCILLYWKDKVIDFDLPITVKLK 183

Query: 183 VVDVDPGLKGDTAQGGSKPATLETGAIVNVPLFVEKGQQIVVDTRSGQYMSR 338
           VVDVDPGL+GDT QGGSKPAT+ETGAIV VPLF+  G++I VDTR+G YM+R
Sbjct: 184 VVDVDPGLRGDTVQGGSKPATMETGAIVAVPLFINVGEEIFVDTRTGAYMNR 235


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