BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002406
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|2...   505   e-141
ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis...   503   e-140
emb|CBI32097.3| unnamed protein product [Vitis vinifera]              503   e-140
ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucum...   501   e-139
ref|XP_002889814.1| DNA polymerase lambda [Arabidopsis lyrata su...   486   e-135

>ref|XP_002314725.1| predicted protein [Populus trichocarpa] gi|222863765|gb|EEF00896.1|
            predicted protein [Populus trichocarpa]
          Length = 508

 Score =  505 bits (1300), Expect = e-141
 Identities = 240/296 (81%), Positives = 271/296 (91%)
 Frame = +2

Query: 8    DDKNPGSSESSLVYNPPDLNKNITEIFGKLINIYRAMGDDRRSFSYYKAIPVIEKLPFKI 187
            D +N G SE SL Y+PPDLN++ITEIFGKLINIYRA+GDDRRSFSYYKAIPV+EKLPFKI
Sbjct: 161  DAENKGLSELSLPYSPPDLNRSITEIFGKLINIYRALGDDRRSFSYYKAIPVVEKLPFKI 220

Query: 188  ESMEQVKHLPAIGKSMQEHIHEIVTTGKLSKLEHFKTDEKVRTISLFGEVWGIGPATALK 367
            ES +QVK LP IGKSMQ+HI EIVTTGKLSKLEHF+TDEKVRTISLFGEVWGIGPATALK
Sbjct: 221  ESADQVKDLPGIGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALK 280

Query: 368  LYEKGCRTLDDLKVEASLTNAQQIGLKYFDDIRTRIPRHEVQEMELLLQKAGEKVLPGVV 547
             YEKG RTL+DLK E SLT++Q++GLKYFDDI+TRIPRHEVQEMELLLQK GE++LPGV 
Sbjct: 281  FYEKGHRTLEDLKNEDSLTHSQKLGLKYFDDIKTRIPRHEVQEMELLLQKTGEEILPGVD 340

Query: 548  VLCAGSFRRGKASCGDMDIIFTHPDGRSHIGFLSKYIKHLKDLNFLKEDLLVGIHSEEGT 727
            +LC GS+RRGKASCGD+DI+ THPDG+SH GFL++Y+K LKD+ FL+EDL+   HSEEGT
Sbjct: 341  ILCGGSYRRGKASCGDLDIVITHPDGKSHKGFLTRYVKRLKDMKFLREDLIFSTHSEEGT 400

Query: 728  DSGVDTYFGLCTYPGRELRHRIDLKVYPKDIYAFGLIHWTGNDVLNRRLRLIAESK 895
            DSGVDTYFGLCTYPGRELRHRID KVYP+DIYAFGL+ WTGNDVLNRRLRL+AESK
Sbjct: 401  DSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLVAWTGNDVLNRRLRLLAESK 456


>ref|XP_002266446.2| PREDICTED: DNA polymerase lambda-like [Vitis vinifera]
          Length = 543

 Score =  503 bits (1296), Expect = e-140
 Identities = 242/295 (82%), Positives = 271/295 (91%)
 Frame = +2

Query: 11   DKNPGSSESSLVYNPPDLNKNITEIFGKLINIYRAMGDDRRSFSYYKAIPVIEKLPFKIE 190
            +K  G+ +SSL Y+PPDLNKNITEIFGKLINIYRA+GDDRRSFSY+KAI VIEKLPFKIE
Sbjct: 197  NKAVGTLDSSLPYSPPDLNKNITEIFGKLINIYRALGDDRRSFSYHKAIGVIEKLPFKIE 256

Query: 191  SMEQVKHLPAIGKSMQEHIHEIVTTGKLSKLEHFKTDEKVRTISLFGEVWGIGPATALKL 370
            S +QVK LP IGKSMQ+HI EIVTTGKLSKLEHF+TDEKVRTI+LFGEVWGIGPATALKL
Sbjct: 257  SADQVKDLPTIGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTINLFGEVWGIGPATALKL 316

Query: 371  YEKGCRTLDDLKVEASLTNAQQIGLKYFDDIRTRIPRHEVQEMELLLQKAGEKVLPGVVV 550
            YEKG RTLDDLK E SLTNAQ++GLKYFDDI+ R+PRHEVQEMELLLQKAGE+VLPGV +
Sbjct: 317  YEKGYRTLDDLKNEDSLTNAQKLGLKYFDDIKKRVPRHEVQEMELLLQKAGEEVLPGVSI 376

Query: 551  LCAGSFRRGKASCGDMDIIFTHPDGRSHIGFLSKYIKHLKDLNFLKEDLLVGIHSEEGTD 730
            +C GS+RRGKASCGD+DII THPDG+SH GFL +Y+KHLKD+ FL+EDL+   HSEEGTD
Sbjct: 377  VCGGSYRRGKASCGDLDIIITHPDGKSHRGFLPRYVKHLKDMKFLREDLIFSTHSEEGTD 436

Query: 731  SGVDTYFGLCTYPGRELRHRIDLKVYPKDIYAFGLIHWTGNDVLNRRLRLIAESK 895
            SGVDTYFGLCTYP RELRHRIDLKVYP++IYAFGLI WTGNDVLNRRLR++AESK
Sbjct: 437  SGVDTYFGLCTYPARELRHRIDLKVYPRNIYAFGLIAWTGNDVLNRRLRILAESK 491


>emb|CBI32097.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score =  503 bits (1294), Expect = e-140
 Identities = 241/291 (82%), Positives = 269/291 (92%)
 Frame = +2

Query: 23   GSSESSLVYNPPDLNKNITEIFGKLINIYRAMGDDRRSFSYYKAIPVIEKLPFKIESMEQ 202
            G+ +SSL Y+PPDLNKNITEIFGKLINIYRA+GDDRRSFSY+KAI VIEKLPFKIES +Q
Sbjct: 205  GTLDSSLPYSPPDLNKNITEIFGKLINIYRALGDDRRSFSYHKAIGVIEKLPFKIESADQ 264

Query: 203  VKHLPAIGKSMQEHIHEIVTTGKLSKLEHFKTDEKVRTISLFGEVWGIGPATALKLYEKG 382
            VK LP IGKSMQ+HI EIVTTGKLSKLEHF+TDEKVRTI+LFGEVWGIGPATALKLYEKG
Sbjct: 265  VKDLPTIGKSMQDHIQEIVTTGKLSKLEHFETDEKVRTINLFGEVWGIGPATALKLYEKG 324

Query: 383  CRTLDDLKVEASLTNAQQIGLKYFDDIRTRIPRHEVQEMELLLQKAGEKVLPGVVVLCAG 562
             RTLDDLK E SLTNAQ++GLKYFDDI+ R+PRHEVQEMELLLQKAGE+VLPGV ++C G
Sbjct: 325  YRTLDDLKNEDSLTNAQKLGLKYFDDIKKRVPRHEVQEMELLLQKAGEEVLPGVSIVCGG 384

Query: 563  SFRRGKASCGDMDIIFTHPDGRSHIGFLSKYIKHLKDLNFLKEDLLVGIHSEEGTDSGVD 742
            S+RRGKASCGD+DII THPDG+SH GFL +Y+KHLKD+ FL+EDL+   HSEEGTDSGVD
Sbjct: 385  SYRRGKASCGDLDIIITHPDGKSHRGFLPRYVKHLKDMKFLREDLIFSTHSEEGTDSGVD 444

Query: 743  TYFGLCTYPGRELRHRIDLKVYPKDIYAFGLIHWTGNDVLNRRLRLIAESK 895
            TYFGLCTYP RELRHRIDLKVYP++IYAFGLI WTGNDVLNRRLR++AESK
Sbjct: 445  TYFGLCTYPARELRHRIDLKVYPRNIYAFGLIAWTGNDVLNRRLRILAESK 495


>ref|XP_004135473.1| PREDICTED: DNA polymerase lambda-like [Cucumis sativus]
          Length = 521

 Score =  501 bits (1289), Expect = e-139
 Identities = 238/286 (83%), Positives = 268/286 (93%)
 Frame = +2

Query: 38   SLVYNPPDLNKNITEIFGKLINIYRAMGDDRRSFSYYKAIPVIEKLPFKIESMEQVKHLP 217
            +L Y+PPD+NKNITEIFGKLINIYRA+GD+RRSFSYYKAIPVIEKLPF+IES++QVKHLP
Sbjct: 184  ALSYSPPDMNKNITEIFGKLINIYRALGDERRSFSYYKAIPVIEKLPFRIESIDQVKHLP 243

Query: 218  AIGKSMQEHIHEIVTTGKLSKLEHFKTDEKVRTISLFGEVWGIGPATALKLYEKGCRTLD 397
            AIGKS+Q+HI EIVTTGKLSKLEHF+TDEKVRTISLFGEVWGIGPATAL+LYEKG RTLD
Sbjct: 244  AIGKSLQDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALRLYEKGYRTLD 303

Query: 398  DLKVEASLTNAQQIGLKYFDDIRTRIPRHEVQEMELLLQKAGEKVLPGVVVLCAGSFRRG 577
            DL+ E SLT+AQ++GLKYFDDI+ RIPR+EVQ+ME LL+KAGE VLPGV +LC GSFRRG
Sbjct: 304  DLQKEESLTHAQKLGLKYFDDIKQRIPRNEVQDMESLLKKAGEDVLPGVDILCGGSFRRG 363

Query: 578  KASCGDMDIIFTHPDGRSHIGFLSKYIKHLKDLNFLKEDLLVGIHSEEGTDSGVDTYFGL 757
            K+SCGDMDI+ THPDG+SH GFL KY+KHLKD+ FL+EDL+   HSEEGTDSGVDTYFGL
Sbjct: 364  KSSCGDMDIVITHPDGKSHRGFLPKYVKHLKDMKFLREDLIFSTHSEEGTDSGVDTYFGL 423

Query: 758  CTYPGRELRHRIDLKVYPKDIYAFGLIHWTGNDVLNRRLRLIAESK 895
            CTYPGRELRHRIDLKVYP+DIYAFGLI WTGNDVLNRRLRL+AESK
Sbjct: 424  CTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESK 469


>ref|XP_002889814.1| DNA polymerase lambda [Arabidopsis lyrata subsp. lyrata]
            gi|297335656|gb|EFH66073.1| DNA polymerase lambda
            [Arabidopsis lyrata subsp. lyrata]
          Length = 529

 Score =  486 bits (1250), Expect = e-135
 Identities = 231/289 (79%), Positives = 265/289 (91%)
 Frame = +2

Query: 29   SESSLVYNPPDLNKNITEIFGKLINIYRAMGDDRRSFSYYKAIPVIEKLPFKIESMEQVK 208
            SES+ VY PPDLN+NITEIFGKLINIYRA+G+DRRSFSYYKAIPVIEK P KIES++Q+K
Sbjct: 189  SESTSVYKPPDLNRNITEIFGKLINIYRALGEDRRSFSYYKAIPVIEKFPTKIESIDQLK 248

Query: 209  HLPAIGKSMQEHIHEIVTTGKLSKLEHFKTDEKVRTISLFGEVWGIGPATALKLYEKGCR 388
            HLP IGKSM++HI EIVTTGKLSKLEHF+TDEKVRTISLFGEVWGIGPATALKLY+KG R
Sbjct: 249  HLPGIGKSMRDHIQEIVTTGKLSKLEHFETDEKVRTISLFGEVWGIGPATALKLYDKGHR 308

Query: 389  TLDDLKVEASLTNAQQIGLKYFDDIRTRIPRHEVQEMELLLQKAGEKVLPGVVVLCAGSF 568
            TL+DLK E SLT+AQ++GLKYFDDIRTRI RHEVQEME LLQ+ GE+ LPGV ++C GS+
Sbjct: 309  TLEDLKNEDSLTHAQRLGLKYFDDIRTRILRHEVQEMEQLLQRVGEETLPGVNIVCGGSY 368

Query: 569  RRGKASCGDMDIIFTHPDGRSHIGFLSKYIKHLKDLNFLKEDLLVGIHSEEGTDSGVDTY 748
            RRGKA+CGD+DI+ THPDG+SH GFL+K++K LK++NFL+EDL+   HSEEGTDSGVDTY
Sbjct: 369  RRGKATCGDLDIVITHPDGQSHKGFLTKFVKRLKEINFLREDLIFSTHSEEGTDSGVDTY 428

Query: 749  FGLCTYPGRELRHRIDLKVYPKDIYAFGLIHWTGNDVLNRRLRLIAESK 895
            FGLCTYPG+ELR RID KVYP+DIYAFGLI WTGNDVLNRRLRL+AESK
Sbjct: 429  FGLCTYPGQELRRRIDFKVYPRDIYAFGLIAWTGNDVLNRRLRLLAESK 477