BLASTX nr result

ID: Bupleurum21_contig00002403 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002403
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95845.1| unknown [Populus trichocarpa]                          249   1e-63
ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|2...   244   2e-62
ref|XP_002863905.1| histidine triad family protein [Arabidopsis ...   242   1e-61
ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [A...   242   1e-61
ref|XP_004146949.1| PREDICTED: uncharacterized HIT-like protein ...   239   7e-61

>gb|ABK95845.1| unknown [Populus trichocarpa]
          Length = 197

 Score =  249 bits (635), Expect = 1e-63
 Identities = 125/195 (64%), Positives = 148/195 (75%), Gaps = 2/195 (1%)
 Frame = -2

Query: 903 MDARRRLAVLTSHLQPLSSSNPVVSFSNCXXXXXXXXXHTNKDIQQSSCVFCKIIRGDAP 724
           M++R RL+++ SHL P S S P    S+            +    Q  CVFC+I+RG++P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPPSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 723 AFKLYEDDICLCILDVNPLSPGHSLIIPKGHFSCLEATPPSVIGAMCSKVPVISNAVMKA 544
           AFKLYED+ CLCILD +PLSPGHSLIIPK HFSCLEATPPSV+ AMCSKVP I NA+MKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 543 TGCDSFNLLVNNGAAAGQVIYHTHIHIIPRNARDCLWASESLRRRPLKCNKEASNLVDCI 364
            G DSFNLLVNNGAAAGQVI+HTHIHIIPR ARDCLW +ESLRRRPL  ++EAS LV+ +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 363 REKLLSL--EKYKDS 325
           RE+L S+  E  KDS
Sbjct: 181 REQLSSISPEDGKDS 195


>ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|222844801|gb|EEE82348.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  244 bits (624), Expect = 2e-62
 Identities = 120/187 (64%), Positives = 143/187 (76%)
 Frame = -2

Query: 903 MDARRRLAVLTSHLQPLSSSNPVVSFSNCXXXXXXXXXHTNKDIQQSSCVFCKIIRGDAP 724
           M++R RL+++ SHL P S S      S+            +    Q  CVFC+I+RG++P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPTSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 723 AFKLYEDDICLCILDVNPLSPGHSLIIPKGHFSCLEATPPSVIGAMCSKVPVISNAVMKA 544
           AFKLYED+ CLCILD +PLSPGHSLIIPK HFSCLEATPPSV+ AMCSKVP I NA+MKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 543 TGCDSFNLLVNNGAAAGQVIYHTHIHIIPRNARDCLWASESLRRRPLKCNKEASNLVDCI 364
            G DSFNLLVNNGAAAGQVI+HTHIHIIPR ARDCLW +ESLRRRPL  ++EAS LV+ +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 363 REKLLSL 343
           RE+L S+
Sbjct: 181 REQLSSI 187


>ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309740|gb|EFH40164.1| histidine triad family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  242 bits (618), Expect = 1e-61
 Identities = 120/186 (64%), Positives = 140/186 (75%), Gaps = 3/186 (1%)
 Frame = -2

Query: 891 RRLAVLTSHLQPLSSS---NPVVSFSNCXXXXXXXXXHTNKDIQQSSCVFCKIIRGDAPA 721
           RRLA+L SHL P   +   +P++  S+C                Q+ CVFCKIIRG++P 
Sbjct: 4   RRLAILCSHLNPPGPNPTRDPILRVSDCSSSASSGDGKVESSNLQNDCVFCKIIRGESPC 63

Query: 720 FKLYEDDICLCILDVNPLSPGHSLIIPKGHFSCLEATPPSVIGAMCSKVPVISNAVMKAT 541
            KLYEDD+CLCILD NPLS GHSLIIPK H+  LE TPPSV+ AMCSKVP+ISNA++KAT
Sbjct: 64  LKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKAT 123

Query: 540 GCDSFNLLVNNGAAAGQVIYHTHIHIIPRNARDCLWASESLRRRPLKCNKEASNLVDCIR 361
           G DSFNLLVNNGAAAGQVI+HTHIHIIPR  RDCLWASESLRR  LK +KEAS LV  +R
Sbjct: 124 GSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLVSRVR 183

Query: 360 EKLLSL 343
           ++L SL
Sbjct: 184 QQLCSL 189


>ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana]
           gi|332008302|gb|AED95685.1| protein histidine triad
           nucleotide-binding 3 [Arabidopsis thaliana]
          Length = 197

 Score =  242 bits (617), Expect = 1e-61
 Identities = 121/186 (65%), Positives = 140/186 (75%), Gaps = 3/186 (1%)
 Frame = -2

Query: 891 RRLAVLTSHLQPLSSS---NPVVSFSNCXXXXXXXXXHTNKDIQQSSCVFCKIIRGDAPA 721
           RRLA+L SHL P   +   +P +  S+C           +  +Q + CVFCKIIRG++P 
Sbjct: 4   RRLAILCSHLNPPGPNPTRDPTLRVSDCSSGSSGDGKVESSTLQ-NDCVFCKIIRGESPC 62

Query: 720 FKLYEDDICLCILDVNPLSPGHSLIIPKGHFSCLEATPPSVIGAMCSKVPVISNAVMKAT 541
            KLYEDD+CLCILD NPLS GHSLIIPK H+  LE TPPSV+ AMCSKVP+ISNA++KAT
Sbjct: 63  LKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIVKAT 122

Query: 540 GCDSFNLLVNNGAAAGQVIYHTHIHIIPRNARDCLWASESLRRRPLKCNKEASNLVDCIR 361
           G DSFNLLVNNGAAAGQVI+HTHIHIIPR  RDCLWASESLRR  LK +KEAS LV C+R
Sbjct: 123 GSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHSLKLDKEASQLVSCVR 182

Query: 360 EKLLSL 343
             L SL
Sbjct: 183 RHLCSL 188


>ref|XP_004146949.1| PREDICTED: uncharacterized HIT-like protein Rv1262c/MT1300-like
           [Cucumis sativus] gi|449526732|ref|XP_004170367.1|
           PREDICTED: uncharacterized HIT-like protein
           Rv1262c/MT1300-like [Cucumis sativus]
          Length = 208

 Score =  239 bits (611), Expect = 7e-61
 Identities = 129/201 (64%), Positives = 148/201 (73%), Gaps = 7/201 (3%)
 Frame = -2

Query: 891 RRLAVLTSHLQPL---SSSNPVVSFSNCXXXXXXXXXHTNKDIQQSS----CVFCKIIRG 733
           RRLA+L SHL P+   SS  P+++ S+          H   D Q+ S    CVFCKIIRG
Sbjct: 4   RRLAILCSHLCPVNLGSSPAPLLNLSSSSCASGSKSEHLIYDSQKGSLQDDCVFCKIIRG 63

Query: 732 DAPAFKLYEDDICLCILDVNPLSPGHSLIIPKGHFSCLEATPPSVIGAMCSKVPVISNAV 553
           +APAFKLY+DD CLCILD  PLS GH+LIIPK H+S LEATPPSVI AMCSKVP+ISNA+
Sbjct: 64  EAPAFKLYDDDSCLCILDTKPLSNGHALIIPKSHYSSLEATPPSVIAAMCSKVPIISNAI 123

Query: 552 MKATGCDSFNLLVNNGAAAGQVIYHTHIHIIPRNARDCLWASESLRRRPLKCNKEASNLV 373
           MK+TG DSFNLLVNNG AAGQVI+HTHIHIIPR ARDCLWASESL RR LK ++EAS L 
Sbjct: 124 MKSTGSDSFNLLVNNGVAAGQVIFHTHIHIIPRKARDCLWASESLERRTLKFDEEASRLA 183

Query: 372 DCIREKLLSLEKYKDSSDQGS 310
             I+E +L   K  DS  Q S
Sbjct: 184 KSIQE-ILHCTKENDSKVQES 203


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