BLASTX nr result

ID: Bupleurum21_contig00002357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002357
         (637 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513408.1| conserved hypothetical protein [Ricinus comm...   206   3e-51
ref|XP_002317616.1| predicted protein [Populus trichocarpa] gi|2...   200   2e-49
gb|ABK96244.1| unknown [Populus trichocarpa x Populus deltoides]      200   2e-49
ref|XP_002332187.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
ref|XP_002884932.1| protein binding protein [Arabidopsis lyrata ...   194   9e-48

>ref|XP_002513408.1| conserved hypothetical protein [Ricinus communis]
           gi|223547316|gb|EEF48811.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 333

 Score =  206 bits (524), Expect = 3e-51
 Identities = 111/204 (54%), Positives = 137/204 (67%), Gaps = 27/204 (13%)
 Frame = -2

Query: 636 DNFIAQHTEKIRSEIEEHRKPNSRRIISAVQDIIFKKLRAKEEQLDKIEKLNCALQERVK 457
           D+ I+QH EK+R E+E+ RK  +RRII A+++ + K+LRAKEE+++KI KLN AL+ERVK
Sbjct: 129 DHLISQHMEKVRMELEDKRKRQARRIIEAIEEGMLKRLRAKEEEIEKIGKLNWALEERVK 188

Query: 456 SLCIENQIWRDLAQSTEATAAALRGNLEQVL-------RHRAGATD---AADVNDDAQSC 307
           SLCIENQIWRDLAQ+ EATA ALR NLEQVL       R R    D   AA   DDAQSC
Sbjct: 189 SLCIENQIWRDLAQTNEATANALRTNLEQVLAAQVKEERTRCAGLDEAAAAAEMDDAQSC 248

Query: 306 CGSNNTXXXXXEKNGVGIAC-----------------CRKCGKAEACVLLLPCRHLCVCS 178
           CGS++      EK  +   C                 CRKC K E+CVLLLPCRHLC+C+
Sbjct: 249 CGSSDEGEEEGEKRRLSERCTLASRAHDKDTGSSSRMCRKCRKEESCVLLLPCRHLCLCT 308

Query: 177 VCGTSVIVCPVCNSTKNASLLVNM 106
           VCG+S+  CP+C +TKNAS  VNM
Sbjct: 309 VCGSSLNTCPICKATKNASFHVNM 332


>ref|XP_002317616.1| predicted protein [Populus trichocarpa] gi|222860681|gb|EEE98228.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  200 bits (509), Expect = 2e-49
 Identities = 107/209 (51%), Positives = 134/209 (64%), Gaps = 32/209 (15%)
 Frame = -2

Query: 636 DNFIAQHTEKIRSEIEEHRKPNSRRIISAVQDIIFKKLRAKEEQLDKIEKLNCALQERVK 457
           D  ++QH EK+R EIEE R+  +RRII A++  + K+LRAKEE+++KI KLN AL+E+VK
Sbjct: 131 DCLVSQHMEKVRMEIEEKRRRQARRIIEAIETGMMKRLRAKEEEIEKIGKLNWALEEKVK 190

Query: 456 SLCIENQIWRDLAQSTEATAAALRGNLEQVLRHR--------AGATD-AADVNDDAQSCC 304
           SLC+ENQIWRDLAQS EATA  LR NLEQVL  +        AG  D  A + DDAQSCC
Sbjct: 191 SLCVENQIWRDLAQSNEATANTLRSNLEQVLAAQVKEDRTLGAGLDDQTAALLDDAQSCC 250

Query: 303 GSNNTXXXXXEKNGVGIAC-----------------------CRKCGKAEACVLLLPCRH 193
           GSN        +  V   C                       CR C KAE+CVLLLPCRH
Sbjct: 251 GSNGGDGDDGWEEKVSERCTLANGAQDNNGAGPRGTGTSSWLCRNCNKAESCVLLLPCRH 310

Query: 192 LCVCSVCGTSVIVCPVCNSTKNASLLVNM 106
           LC+C+VCG+S+  CP+C +TKNAS+ VN+
Sbjct: 311 LCLCTVCGSSLHTCPICKATKNASVHVNL 339


>gb|ABK96244.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 340

 Score =  200 bits (509), Expect = 2e-49
 Identities = 107/209 (51%), Positives = 134/209 (64%), Gaps = 32/209 (15%)
 Frame = -2

Query: 636 DNFIAQHTEKIRSEIEEHRKPNSRRIISAVQDIIFKKLRAKEEQLDKIEKLNCALQERVK 457
           D  ++QH EK+R EIEE R+  +RRII A++  + K+LRAKEE+++KI KLN AL+E+VK
Sbjct: 131 DCLVSQHMEKVRMEIEEKRRRQARRIIEAIETGMMKRLRAKEEEIEKIGKLNWALEEKVK 190

Query: 456 SLCIENQIWRDLAQSTEATAAALRGNLEQVLRHR--------AGATD-AADVNDDAQSCC 304
           SLC+ENQIWRDLAQS EATA  LR NLEQVL  +        AG  D  A + DDAQSCC
Sbjct: 191 SLCVENQIWRDLAQSNEATANTLRSNLEQVLAAQVKEDRTLGAGLDDQTAALLDDAQSCC 250

Query: 303 GSNNTXXXXXEKNGVGIAC-----------------------CRKCGKAEACVLLLPCRH 193
           GSN        +  V   C                       CR C KAE+CVLLLPCRH
Sbjct: 251 GSNGGDGDDGWEEKVSERCTLANGAQDNNGAGPRGTGTSSWLCRNCNKAESCVLLLPCRH 310

Query: 192 LCVCSVCGTSVIVCPVCNSTKNASLLVNM 106
           LC+C+VCG+S+  CP+C +TKNAS+ VN+
Sbjct: 311 LCLCTVCGSSLHTCPICKATKNASVHVNL 339


>ref|XP_002332187.1| predicted protein [Populus trichocarpa] gi|222875294|gb|EEF12425.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score =  197 bits (500), Expect = 2e-48
 Identities = 106/207 (51%), Positives = 134/207 (64%), Gaps = 30/207 (14%)
 Frame = -2

Query: 636 DNFIAQHTEKIRSEIEEHRKPNSRRIISAVQDIIFKKLRAKEEQLDKIEKLNCALQERVK 457
           D  I+QH EK+R EIEE RK  +RR++ A++  + K+LRAKEE+++KI KLN AL+E+VK
Sbjct: 130 DCLISQHMEKVRMEIEEKRKRQARRLLEALETGMVKRLRAKEEEIEKIGKLNWALEEKVK 189

Query: 456 SLCIENQIWRDLAQSTEATAAALRGNLEQVLRHRAGA---------TDAADVNDDAQSCC 304
           SLC+ENQIWRDLAQS EATA ALR NLEQVL  +              AA + DDAQSCC
Sbjct: 190 SLCMENQIWRDLAQSNEATANALRSNLEQVLAAQVNEERTLGAGLDNQAAALMDDAQSCC 249

Query: 303 GSNN------------------TXXXXXEKN---GVGIACCRKCGKAEACVLLLPCRHLC 187
           GS+                   T     + N   G G   CR C K E+CVLLLPCRHLC
Sbjct: 250 GSSGGDGPVGDDGWEERVSERCTLANGAQDNKGTGAGSWMCRNCNKEESCVLLLPCRHLC 309

Query: 186 VCSVCGTSVIVCPVCNSTKNASLLVNM 106
           +C+VCG+S+  CP+C +TKNAS+ VN+
Sbjct: 310 LCTVCGSSLHTCPICRATKNASVHVNL 336


>ref|XP_002884932.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330772|gb|EFH61191.1| protein binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 333

 Score =  194 bits (494), Expect = 9e-48
 Identities = 100/192 (52%), Positives = 128/192 (66%), Gaps = 15/192 (7%)
 Frame = -2

Query: 636 DNFIAQHTEKIRSEIEEHRKPNSRRIISAVQDIIFKKLRAKEEQLDKIEKLNCALQERVK 457
           D  I+ H E++R EIEE RK   RRI+ AV+  + K LRAK+E+++ I KLN  L+E+VK
Sbjct: 140 DRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDEEINHIGKLNLFLEEKVK 199

Query: 456 SLCIENQIWRDLAQSTEATAAALRGNLEQVLR--HRAGATDAADVNDDAQSCCGSNNTXX 283
           SLC+ENQIWRD+AQS EAT  ALR NL+QVL    R    +   V DDA+SCCGSN+   
Sbjct: 200 SLCVENQIWRDVAQSNEATVNALRSNLQQVLATVERNRWEEPPTVADDAESCCGSNDEGD 259

Query: 282 XXXEK-------------NGVGIACCRKCGKAEACVLLLPCRHLCVCSVCGTSVIVCPVC 142
              E+               VG++ CR CGK EA VLLLPCRH+C+C+VCG+S+  CP+C
Sbjct: 260 SEEERWKLAGEAQDTKKMRRVGLSMCRSCGKGEASVLLLPCRHMCLCTVCGSSLNTCPIC 319

Query: 141 NSTKNASLLVNM 106
            S KNASL VN+
Sbjct: 320 KSPKNASLHVNL 331


Top