BLASTX nr result

ID: Bupleurum21_contig00002324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002324
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus ...   179   6e-43
emb|CAJ19273.1| putative RNA binding protein [Solanum commersonii]    176   7e-42
ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g...   175   1e-41
ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA...   172   1e-40
ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g...   170   5e-40

>ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
           gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein,
           putative [Ricinus communis]
          Length = 548

 Score =  179 bits (455), Expect = 6e-43
 Identities = 94/160 (58%), Positives = 112/160 (70%), Gaps = 4/160 (2%)
 Frame = +1

Query: 1   PPPRQFDNYYPPTDMAP-IEKQPRAGPPAYGRDMSMGTQ--QNMQPHQSMVTKVSQNMQI 171
           PPPRQ +NYYPP D+ P +EKQP  G  AYGR+  MG     N Q   SM+T+++Q MQI
Sbjct: 373 PPPRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQITQQMQI 432

Query: 172 PLTYADAVIGTSGTNISYIRRASGATIAIQETRGIPDEMTVEINGSASQVQTAQQLIQNF 351
           PL+YADAVIGT+GT+ISYIRRASGAT+ IQETRG+P EMTVEI+G+ASQVQTAQQLIQNF
Sbjct: 433 PLSYADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISGTASQVQTAQQLIQNF 492

Query: 352 I-XXXXXXXXXXXXXXXXXYNPYPNNGPAYMSQPPDGGHA 468
           +                  YNPY  +G  Y S P + GHA
Sbjct: 493 MAEAGAPTQAQTGGSTDQGYNPYAAHGSVYASPPSNPGHA 532


>emb|CAJ19273.1| putative RNA binding protein [Solanum commersonii]
          Length = 184

 Score =  176 bits (446), Expect = 7e-42
 Identities = 86/115 (74%), Positives = 99/115 (86%)
 Frame = +1

Query: 4   PPRQFDNYYPPTDMAPIEKQPRAGPPAYGRDMSMGTQQNMQPHQSMVTKVSQNMQIPLTY 183
           PPRQFDNY+P  DM   +KQP  GPP YGRD S+G   N QP QS+V+KV+QN+QIPL+Y
Sbjct: 68  PPRQFDNYFPRVDMHQ-DKQPHQGPPVYGRDASVGAHGNAQPQQSIVSKVTQNIQIPLSY 126

Query: 184 ADAVIGTSGTNISYIRRASGATIAIQETRGIPDEMTVEINGSASQVQTAQQLIQN 348
           ADAVIG SG+NISYIRRASGATIA+QETRG+P EMTVEINGSASQVQTAQQL+Q+
Sbjct: 127 ADAVIGASGSNISYIRRASGATIAVQETRGVPGEMTVEINGSASQVQTAQQLVQD 181


>ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 528

 Score =  175 bits (444), Expect = 1e-41
 Identities = 92/167 (55%), Positives = 112/167 (67%), Gaps = 7/167 (4%)
 Frame = +1

Query: 1   PPPRQFDNYYPPTDMAPIEKQPRAGPP-AYGRDMSMGTQQNM-QPHQSMVTKVSQNMQIP 174
           PP   +D+YYPPT++ P++K    GPP AY RD SMG   +  QP QS+VTKV+Q+MQIP
Sbjct: 351 PPSHHYDSYYPPTELPPMDKHLHQGPPPAYARDASMGIHSSSAQPQQSVVTKVTQHMQIP 410

Query: 175 LTYADAVIGTSGTNISYIRRASGATIAIQETRGIPDEMTVEINGSASQVQTAQQLIQNFI 354
           LTYADAVIG SGTNISYIRRASGA+I IQETRG+P EMTVEI+G++SQ+Q AQQL+QNF+
Sbjct: 411 LTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFM 470

Query: 355 -XXXXXXXXXXXXXXXXXYNPYPNNGPAYMSQPPDG----GHAPAGD 480
                             Y+ YP   P Y   P       GHAP+ D
Sbjct: 471 AEAASATQDPMGGSVSQGYSAYPTTAPVYAPPPTSAGGHTGHAPSAD 517


>ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
           [Glycine max]
          Length = 446

 Score =  172 bits (435), Expect = 1e-40
 Identities = 91/165 (55%), Positives = 111/165 (67%), Gaps = 9/165 (5%)
 Frame = +1

Query: 1   PPPRQFDNYYPPTDMAP-IEKQPRAGPPAYGRDMSMGTQ--QNMQPHQSMVTKVSQNMQI 171
           PPPRQ D+YYPP +M P +++QP  G  AYGRD S+G     N Q   S+VT+++Q MQI
Sbjct: 269 PPPRQLDSYYPPAEMPPPVDRQPHQGISAYGRDASIGVHASSNTQSAPSIVTQITQQMQI 328

Query: 172 PLTYADAVIGTSGTNISYIRRASGATIAIQETRGIPDEMTVEINGSASQVQTAQQLIQNF 351
           PL+YADAVIGT+G +ISYIRRASGAT+ IQE RG+P EMTVEI+G+ASQVQTAQQLIQNF
Sbjct: 329 PLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNF 388

Query: 352 I------XXXXXXXXXXXXXXXXXYNPYPNNGPAYMSQPPDGGHA 468
           +                       YN YP +G  Y S P + GHA
Sbjct: 389 MAEAAAAAAAPAQPQTTVPAADQGYNSYPAHGSLYASPPSNPGHA 433


>ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 529

 Score =  170 bits (430), Expect = 5e-40
 Identities = 90/168 (53%), Positives = 111/168 (66%), Gaps = 8/168 (4%)
 Frame = +1

Query: 1   PPPRQFDNYYPPTDMAPIEKQPRAGPP-AYGRDMSMGTQQNMQP-HQSMVTKVSQNMQIP 174
           PP   +D+YYPPT++ P++K    GPP AY +D SMG   +  P  QS+VTKV+Q+MQIP
Sbjct: 351 PPSHHYDSYYPPTELPPMDKHLHQGPPPAYAKDASMGIHSSSAPPQQSVVTKVTQHMQIP 410

Query: 175 LTYADAVIGTSGTNISYIRRASGATIAIQETRGIPDEMTVEINGSASQVQTAQQLIQNFI 354
           LTYADAVIG SGTNISYIRRASGA+I IQETRG+P EMTVEI+G++SQ+Q AQQL+QNF+
Sbjct: 411 LTYADAVIGASGTNISYIRRASGASITIQETRGVPGEMTVEISGTSSQIQAAQQLVQNFM 470

Query: 355 -XXXXXXXXXXXXXXXXXYNPYPNNGPAYMSQPPDG-----GHAPAGD 480
                             Y+ YP   P Y      G     GHAP+ D
Sbjct: 471 AEAASATQDPMGGSVSQGYSAYPTTAPVYAPPTSAGGGGHTGHAPSAD 518


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