BLASTX nr result

ID: Bupleurum21_contig00002312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002312
         (972 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282402.1| PREDICTED: translocon at the outer membrane ...   384   e-104
ref|XP_004160411.1| PREDICTED: translocon at the outer membrane ...   373   e-101
ref|XP_002530483.1| amidase, putative [Ricinus communis] gi|2235...   372   e-101
ref|XP_004137345.1| PREDICTED: LOW QUALITY PROTEIN: translocon a...   370   e-100
ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...   365   9e-99

>ref|XP_002282402.1| PREDICTED: translocon at the outer membrane of chloroplasts 64 [Vitis
            vinifera] gi|297734325|emb|CBI15572.3| unnamed protein
            product [Vitis vinifera]
          Length = 590

 Score =  384 bits (987), Expect = e-104
 Identities = 192/278 (69%), Positives = 230/278 (82%)
 Frame = +2

Query: 5    RYEFKNDHGEWIASEKPILDTVLGAQIHDSQDLPYSEIENIHIVRNDMRSALNTLLKDDA 184
            R+EFK++H EWI S KPILD  + +Q+HD  ++  +EIEN    R ++RSALN+LLKDD 
Sbjct: 312  RHEFKHNHEEWINSVKPILDASISSQLHDVLEVADTEIENCQSSRMEIRSALNSLLKDDG 371

Query: 185  ILVIPSGLHPPPKLGAKEISSEDYLIRTFSLTSLASMSGCCQVTIPMGFQDKSPVSVSFI 364
            ILVIP+   PPPKLG KE  SE+Y  RT  L S+ASMSGCCQVT+P+G  DK PVSVSF+
Sbjct: 372  ILVIPTVADPPPKLGGKESLSEEYQNRTLGLLSIASMSGCCQVTVPLGLYDKYPVSVSFM 431

Query: 365  ARHGGDRFLLDTAQMLFASLQEQVNAAGKSNLSSNVHSMEASAEIAKEKGNQAYKEKQFK 544
            ARHGGDRFLLDT Q ++ASLQEQ + A KS LSSN    E SAEIAKEKGNQA+K+KQ++
Sbjct: 432  ARHGGDRFLLDTVQTMYASLQEQADIAAKSKLSSNAVDRETSAEIAKEKGNQAFKDKQWQ 491

Query: 545  RAVGLYSEAIKLNGNNATYYSNRAAAHLESGSYNEAEADCTKAIDLDKKNVKSYLRRGTA 724
            +AVG Y+EAIKL+GNNATYYSNRAAA+LE GS+ +AEADCT+AI+LDKKNVK+YLRRGTA
Sbjct: 492  KAVGFYTEAIKLSGNNATYYSNRAAAYLEMGSFLQAEADCTEAINLDKKNVKAYLRRGTA 551

Query: 725  RELLGYYDGAIEDFKYALVLEPTNKRAATSAERLTKLF 838
            RE+LGYY  AIEDF+YALVLEPTNKRA+ SA+RL KLF
Sbjct: 552  REMLGYYKDAIEDFRYALVLEPTNKRASLSADRLKKLF 589


>ref|XP_004160411.1| PREDICTED: translocon at the outer membrane of chloroplasts 64-like
            [Cucumis sativus]
          Length = 591

 Score =  373 bits (957), Expect = e-101
 Identities = 185/278 (66%), Positives = 222/278 (79%)
 Frame = +2

Query: 5    RYEFKNDHGEWIASEKPILDTVLGAQIHDSQDLPYSEIENIHIVRNDMRSALNTLLKDDA 184
            R EFK +HGEWI S KP LD+ L  Q+++  ++  + IE    VRN+MR A+N+LLKDD 
Sbjct: 312  RIEFKGNHGEWIDSVKPDLDSALMEQLNEKLEISDTMIEKFKSVRNEMRMAINSLLKDDG 371

Query: 185  ILVIPSGLHPPPKLGAKEISSEDYLIRTFSLTSLASMSGCCQVTIPMGFQDKSPVSVSFI 364
            +LVIP+ + PPPKLG KEI SE+Y  R FS  S+AS+SGCCQVT+P+GF D  PVSVSF+
Sbjct: 372  VLVIPTTVDPPPKLGGKEIFSEEYQTRVFSSLSIASISGCCQVTLPLGFHDSCPVSVSFL 431

Query: 365  ARHGGDRFLLDTAQMLFASLQEQVNAAGKSNLSSNVHSMEASAEIAKEKGNQAYKEKQFK 544
            ARHG DRFLLD  Q ++ SLQE+  AA KS  S N  S E SAEIAKEKGNQAYKEKQ++
Sbjct: 432  ARHGADRFLLDIVQTMYKSLQEEAEAASKSKFSKNAVSQEQSAEIAKEKGNQAYKEKQWE 491

Query: 545  RAVGLYSEAIKLNGNNATYYSNRAAAHLESGSYNEAEADCTKAIDLDKKNVKSYLRRGTA 724
            +A+G Y+EAIKLN  NATYYSNRAAA+LE G +++AEADC+KAIDLDKKNVKSYLRRGTA
Sbjct: 492  KAIGCYTEAIKLNSRNATYYSNRAAAYLELGRFHQAEADCSKAIDLDKKNVKSYLRRGTA 551

Query: 725  RELLGYYDGAIEDFKYALVLEPTNKRAATSAERLTKLF 838
            RE+LG+Y  AIEDF +ALVLEPTNKRA+ SAERL KLF
Sbjct: 552  REMLGFYKEAIEDFSHALVLEPTNKRASISAERLRKLF 589


>ref|XP_002530483.1| amidase, putative [Ricinus communis] gi|223529980|gb|EEF31906.1|
            amidase, putative [Ricinus communis]
          Length = 589

 Score =  372 bits (956), Expect = e-101
 Identities = 189/280 (67%), Positives = 230/280 (82%), Gaps = 2/280 (0%)
 Frame = +2

Query: 5    RYEFKNDHGEWIASEKPILDTVLGAQIHDSQDLPYSEIENIHIVRNDMRSALNTLLKDDA 184
            RYEF+++H EWI  EKP +D  + AQIH+  D+P +EIE    +R +MR+A+N+LLKDD 
Sbjct: 312  RYEFRHNHEEWINIEKPNVDHNISAQIHEIVDIPDTEIEIFKSIRQEMRAAINSLLKDDG 371

Query: 185  ILVIPSGLHPPPKLGAKEISSEDYLIRTFSLTSLASMSGCCQVTIPMGFQDKSPVSVSFI 364
            ILVIP+  H PPKLG K++ SEDY I  FSL S+AS+SGCCQVTIP+G  +K PVSVSFI
Sbjct: 372  ILVIPTTAHLPPKLGGKDMLSEDYQILLFSLLSIASLSGCCQVTIPLGLYEKCPVSVSFI 431

Query: 365  ARHGGDRFLLDTAQMLFASLQEQVN--AAGKSNLSSNVHSMEASAEIAKEKGNQAYKEKQ 538
            ARHGGDRFL+DT Q +++SLQEQV+  A  KS+ S N    E SAE+AKEKGNQAYKEKQ
Sbjct: 432  ARHGGDRFLMDTVQNMYSSLQEQVDMLAKPKSHTSDN---QERSAEMAKEKGNQAYKEKQ 488

Query: 539  FKRAVGLYSEAIKLNGNNATYYSNRAAAHLESGSYNEAEADCTKAIDLDKKNVKSYLRRG 718
            +++A+  Y+EAIKLNG NATYYSNRAAA+LE GS+ +AEADCTKAI+LDKKNVK+YLRRG
Sbjct: 489  WQKAISYYTEAIKLNGKNATYYSNRAAAYLELGSFLQAEADCTKAINLDKKNVKAYLRRG 548

Query: 719  TARELLGYYDGAIEDFKYALVLEPTNKRAATSAERLTKLF 838
            TARE++GYY  AIEDF+YALVLEPTNKRAA SAERL K+F
Sbjct: 549  TAREMIGYYKEAIEDFQYALVLEPTNKRAALSAERLRKMF 588


>ref|XP_004137345.1| PREDICTED: LOW QUALITY PROTEIN: translocon at the outer membrane of
            chloroplasts 64-like [Cucumis sativus]
          Length = 585

 Score =  370 bits (949), Expect = e-100
 Identities = 184/278 (66%), Positives = 221/278 (79%)
 Frame = +2

Query: 5    RYEFKNDHGEWIASEKPILDTVLGAQIHDSQDLPYSEIENIHIVRNDMRSALNTLLKDDA 184
            R EFK +HGEWI S KP LD+ L  Q+++  ++  + IE    VRN+MR A+N+LLKDD 
Sbjct: 306  RIEFKGNHGEWIDSVKPDLDSALMEQLNEKLEISDTMIEKFKSVRNEMRMAINSLLKDDG 365

Query: 185  ILVIPSGLHPPPKLGAKEISSEDYLIRTFSLTSLASMSGCCQVTIPMGFQDKSPVSVSFI 364
            +LVIP+ +  PPKLG KEI SE+Y  R FS  S+AS+SGCCQVT+P+GF D  PVSVSF+
Sbjct: 366  VLVIPTTVDSPPKLGGKEIFSEEYQTRVFSSLSIASISGCCQVTLPLGFHDSCPVSVSFL 425

Query: 365  ARHGGDRFLLDTAQMLFASLQEQVNAAGKSNLSSNVHSMEASAEIAKEKGNQAYKEKQFK 544
            ARHG DRFLLD  Q ++ SLQE+  AA KS  S N  S E SAEIAKEKGNQAYKEKQ++
Sbjct: 426  ARHGADRFLLDIVQTMYRSLQEEAEAASKSKFSKNAVSQEQSAEIAKEKGNQAYKEKQWE 485

Query: 545  RAVGLYSEAIKLNGNNATYYSNRAAAHLESGSYNEAEADCTKAIDLDKKNVKSYLRRGTA 724
            +A+G Y+EAIKLN  NATYYSNRAAA+LE G +++AEADC+KAIDLDKKNVKSYLRRGTA
Sbjct: 486  KAIGCYTEAIKLNSRNATYYSNRAAAYLELGRFHQAEADCSKAIDLDKKNVKSYLRRGTA 545

Query: 725  RELLGYYDGAIEDFKYALVLEPTNKRAATSAERLTKLF 838
            RE+LG+Y  AIEDF +ALVLEPTNKRA+ SAERL KLF
Sbjct: 546  REMLGFYKEAIEDFSHALVLEPTNKRASISAERLRKLF 583


>ref|XP_003631114.1| Glutamyl-tRNA(Gln) amidotransferase subunit A [Medicago truncatula]
            gi|355525136|gb|AET05590.1| Glutamyl-tRNA(Gln)
            amidotransferase subunit A [Medicago truncatula]
          Length = 594

 Score =  365 bits (937), Expect = 9e-99
 Identities = 184/278 (66%), Positives = 223/278 (80%)
 Frame = +2

Query: 5    RYEFKNDHGEWIASEKPILDTVLGAQIHDSQDLPYSEIENIHIVRNDMRSALNTLLKDDA 184
            R+EF + H EW++  KP L   + AQ+H+  D+   E+EN   VR++MR A+N+LLKD+ 
Sbjct: 317  RHEFGHMHDEWMSIVKPDLHPAVSAQLHEKFDVSEVEMENSKSVRSEMRVAVNSLLKDEG 376

Query: 185  ILVIPSGLHPPPKLGAKEISSEDYLIRTFSLTSLASMSGCCQVTIPMGFQDKSPVSVSFI 364
            ILVIP+   PPPKLG KEI S+DY  R FSL S+AS+SGCCQVT+P+GF DK PVSVS I
Sbjct: 377  ILVIPTVADPPPKLGGKEILSQDYQSRAFSLLSIASISGCCQVTVPLGFYDKYPVSVSLI 436

Query: 365  ARHGGDRFLLDTAQMLFASLQEQVNAAGKSNLSSNVHSMEASAEIAKEKGNQAYKEKQFK 544
            AR+GGDRFLLDT + ++ SLQEQ + A  S  S NV S E SAEIAKEKGNQAYK+KQ++
Sbjct: 437  ARYGGDRFLLDTLKTMYTSLQEQADIAATSKASRNVVSKEQSAEIAKEKGNQAYKDKQWQ 496

Query: 545  RAVGLYSEAIKLNGNNATYYSNRAAAHLESGSYNEAEADCTKAIDLDKKNVKSYLRRGTA 724
            +A+G Y+EAIKL GNNATYYSNRA A+LE GSY +AEADCTKAI LDKK+VK+Y RRGTA
Sbjct: 497  KAIGFYTEAIKLCGNNATYYSNRAQAYLELGSYLQAEADCTKAISLDKKSVKAYFRRGTA 556

Query: 725  RELLGYYDGAIEDFKYALVLEPTNKRAATSAERLTKLF 838
            RE+LGYY  AI+DFKYALVLEPTNKRAA++AERL KLF
Sbjct: 557  REMLGYYKEAIDDFKYALVLEPTNKRAASAAERLRKLF 594


Top