BLASTX nr result

ID: Bupleurum21_contig00002293 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002293
         (598 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16963.3| unnamed protein product [Vitis vinifera]              178   7e-43
ref|XP_002263897.1| PREDICTED: uncharacterized protein LOC100256...   178   7e-43
ref|XP_002263772.1| PREDICTED: uncharacterized protein LOC100244...   155   6e-36
ref|NP_192768.1| cupin domain-containing protein [Arabidopsis th...   152   5e-35
gb|AAM62609.1| unknown [Arabidopsis thaliana]                         151   7e-35

>emb|CBI16963.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  178 bits (451), Expect = 7e-43
 Identities = 80/99 (80%), Positives = 88/99 (88%)
 Frame = +3

Query: 195 NSSITEKFGVKIERNPPQSKLTHLGVTSWPKWGCSPSKFPWTFSATETMFLLAGKVKVYC 374
           +++I E FGVKI RNPPQ+ LT LGVTSW KWGCSPSKFPWTF A ETM+LL GKVKVYC
Sbjct: 10  STAIIEIFGVKIHRNPPQATLTDLGVTSWKKWGCSPSKFPWTFEAKETMYLLEGKVKVYC 69

Query: 375 DGHDEFFEIGAGDLVRFPKGMKVTWDVTEAVNKHYNLDN 491
           DGHD FFEIGAGDLV FPKGMKVTWDVTEA+NKHY+L+N
Sbjct: 70  DGHDGFFEIGAGDLVEFPKGMKVTWDVTEALNKHYSLEN 108


>ref|XP_002263897.1| PREDICTED: uncharacterized protein LOC100256915 [Vitis vinifera]
          Length = 139

 Score =  178 bits (451), Expect = 7e-43
 Identities = 87/132 (65%), Positives = 103/132 (78%)
 Frame = +3

Query: 93  VIPVLVSAALLNYYSTYHMSSTTNSSGPDSLYMVNSSITEKFGVKIERNPPQSKLTHLGV 272
           V+ +L+S AL+ +        T+N + P+     +++I E FGVKI RNPPQ+ LT LGV
Sbjct: 16  VVILLLSVALVVF--------TSNMTKPNP-QEASTAIIEIFGVKIHRNPPQATLTDLGV 66

Query: 273 TSWPKWGCSPSKFPWTFSATETMFLLAGKVKVYCDGHDEFFEIGAGDLVRFPKGMKVTWD 452
           TSW KWGCSPSKFPWTF A ETM+LL GKVKVYCDGHD FFEIGAGDLV FPKGMKVTWD
Sbjct: 67  TSWKKWGCSPSKFPWTFEAKETMYLLEGKVKVYCDGHDGFFEIGAGDLVEFPKGMKVTWD 126

Query: 453 VTEAVNKHYNLD 488
           VTEA+NKHY+L+
Sbjct: 127 VTEALNKHYSLE 138


>ref|XP_002263772.1| PREDICTED: uncharacterized protein LOC100244771 [Vitis vinifera]
           gi|297734730|emb|CBI16964.3| unnamed protein product
           [Vitis vinifera]
          Length = 163

 Score =  155 bits (391), Expect = 6e-36
 Identities = 79/135 (58%), Positives = 91/135 (67%), Gaps = 19/135 (14%)
 Frame = +3

Query: 138 TYHMSSTTNSSGPDS------------LYMVNSSI-------TEKFGVKIERNPPQSKLT 260
           T H+SS +  SG  S             Y VN+ I       TEK G+KIERNPP+S+LT
Sbjct: 28  TKHLSSLSLFSGSSSPLSTKSPKTYKPTYRVNTGIVRAEAMTTEKLGIKIERNPPESRLT 87

Query: 261 HLGVTSWPKWGCSPSKFPWTFSATETMFLLAGKVKVYCDGHDEFFEIGAGDLVRFPKGMK 440
            LGV SWPKWGC PSKFPWTF+  ET +LL GKVKVY DG +E  EIGAGDLV FPKGM 
Sbjct: 88  QLGVKSWPKWGCEPSKFPWTFTTKETCYLLKGKVKVYPDGANECVEIGAGDLVEFPKGMS 147

Query: 441 VTWDVTEAVNKHYNL 485
            TWDV+ AV+KHY+L
Sbjct: 148 CTWDVSVAVDKHYSL 162


>ref|NP_192768.1| cupin domain-containing protein [Arabidopsis thaliana]
           gi|4538959|emb|CAB39783.1| putative protein [Arabidopsis
           thaliana] gi|7267727|emb|CAB78153.1| putative protein
           [Arabidopsis thaliana] gi|117168129|gb|ABK32147.1|
           At4g10300 [Arabidopsis thaliana]
           gi|332657465|gb|AEE82865.1| cupin domain-containing
           protein [Arabidopsis thaliana]
          Length = 134

 Score =  152 bits (383), Expect = 5e-35
 Identities = 73/129 (56%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
 Frame = +3

Query: 105 LVSAALLNYYSTYHMSSTTNSSGPDSLYM-VNSSITEKFGVKIERNPPQSKLTHLGVTSW 281
           +V+   +N Y T   +   NS  P S+   + +  TEK G+ IE+NPP+SKLT LGV SW
Sbjct: 6   VVNVTSINPYLTRRSNKPYNSRRPSSMAAAIRAESTEKLGITIEKNPPESKLTQLGVRSW 65

Query: 282 PKWGCSPSKFPWTFSATETMFLLAGKVKVYCDGHDEFFEIGAGDLVRFPKGMKVTWDVTE 461
           PKWGC PSKFPWT+SA ET +LL GKVKVY +G DE  EI AGD V FPKGM  TWDV+ 
Sbjct: 66  PKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSV 125

Query: 462 AVNKHYNLD 488
           AV+KHY  +
Sbjct: 126 AVDKHYQFE 134


>gb|AAM62609.1| unknown [Arabidopsis thaliana]
          Length = 136

 Score =  151 bits (382), Expect = 7e-35
 Identities = 74/131 (56%), Positives = 88/131 (67%), Gaps = 3/131 (2%)
 Frame = +3

Query: 105 LVSAALLNYYSTYHMSSTTNSSGPDSL---YMVNSSITEKFGVKIERNPPQSKLTHLGVT 275
           +V+   +N Y T   +   NS  P S+       S  TEK G+ IE+NPP+SKLT LGV 
Sbjct: 6   VVNVTSINPYLTRRSNKPYNSRRPSSMAAAIRAESMATEKLGITIEKNPPESKLTQLGVR 65

Query: 276 SWPKWGCSPSKFPWTFSATETMFLLAGKVKVYCDGHDEFFEIGAGDLVRFPKGMKVTWDV 455
           SWPKWGC PSKFPWT+SA ET +LL GKVKVY +G DE  EI AGD V FPKGM  TWDV
Sbjct: 66  SWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDV 125

Query: 456 TEAVNKHYNLD 488
           + AV+KHY  +
Sbjct: 126 SVAVDKHYQFE 136


Top