BLASTX nr result

ID: Bupleurum21_contig00002270 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002270
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a...   142   3e-51
ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [...   140   2e-50
ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [...   138   6e-50
ref|XP_004140407.1| PREDICTED: 60S ribosomal protein L23a-like i...   138   6e-50
ref|XP_004140408.1| PREDICTED: 60S ribosomal protein L23a-like i...   138   6e-50

>sp|Q9AT35.1|RL23A_DAUCA RecName: Full=60S ribosomal protein L23a
           gi|13560777|gb|AAK30202.1|AF349961_1 ribosome protein
           L23a [Daucus carota]
          Length = 154

 Score =  142 bits (359), Expect(2) = 3e-51
 Identities = 71/82 (86%), Positives = 72/82 (87%)
 Frame = +1

Query: 211 IRTSVTFHRPKTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 390
           IRTSVTFHRP+TLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI
Sbjct: 38  IRTSVTFHRPRTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 97

Query: 391 VDIRANXXXXXXXXXXMYDIQT 456
           VDIRAN          MYDIQT
Sbjct: 98  VDIRANKKKIKDAVKKMYDIQT 119



 Score = 85.5 bits (210), Expect(2) = 3e-51
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 507 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 629
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 114 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 154


>ref|XP_004147702.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449514958|ref|XP_004164525.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  140 bits (352), Expect(2) = 2e-50
 Identities = 70/82 (85%), Positives = 70/82 (85%)
 Frame = +1

Query: 211 IRTSVTFHRPKTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 390
           IRTSVTFHRPKTL KDRNPKYPRIS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI
Sbjct: 37  IRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 96

Query: 391 VDIRANXXXXXXXXXXMYDIQT 456
           VDIRAN          MYDIQT
Sbjct: 97  VDIRANKKNIKDAVKKMYDIQT 118



 Score = 85.5 bits (210), Expect(2) = 2e-50
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 507 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 629
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 113 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004149813.1| PREDICTED: 60S ribosomal protein L23a-like [Cucumis sativus]
           gi|449519086|ref|XP_004166566.1| PREDICTED: 60S
           ribosomal protein L23a-like [Cucumis sativus]
          Length = 153

 Score =  138 bits (347), Expect(2) = 6e-50
 Identities = 69/82 (84%), Positives = 70/82 (85%)
 Frame = +1

Query: 211 IRTSVTFHRPKTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 390
           IRTSVTFHRPKTL KDRNPKYPRIS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI
Sbjct: 37  IRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 96

Query: 391 VDIRANXXXXXXXXXXMYDIQT 456
           VDIRA+          MYDIQT
Sbjct: 97  VDIRADKKKIKDAVKKMYDIQT 118



 Score = 85.5 bits (210), Expect(2) = 6e-50
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 507 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 629
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 113 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004140407.1| PREDICTED: 60S ribosomal protein L23a-like isoform 1 [Cucumis
           sativus] gi|449497783|ref|XP_004160517.1| PREDICTED: 60S
           ribosomal protein L23a-like isoform 1 [Cucumis sativus]
          Length = 153

 Score =  138 bits (347), Expect(2) = 6e-50
 Identities = 69/82 (84%), Positives = 70/82 (85%)
 Frame = +1

Query: 211 IRTSVTFHRPKTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 390
           IRTSVTFHRPKTL KDRNPKYPRIS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI
Sbjct: 37  IRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 96

Query: 391 VDIRANXXXXXXXXXXMYDIQT 456
           VDIRA+          MYDIQT
Sbjct: 97  VDIRADKKKIKDAVKKMYDIQT 118



 Score = 85.5 bits (210), Expect(2) = 6e-50
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 507 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 629
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 113 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|XP_004140408.1| PREDICTED: 60S ribosomal protein L23a-like isoform 2 [Cucumis
           sativus] gi|449498363|ref|XP_004160518.1| PREDICTED: 60S
           ribosomal protein L23a-like isoform 2 [Cucumis sativus]
          Length = 152

 Score =  138 bits (347), Expect(2) = 6e-50
 Identities = 69/82 (84%), Positives = 70/82 (85%)
 Frame = +1

Query: 211 IRTSVTFHRPKTLTKDRNPKYPRISATPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 390
           IRTSVTFHRPKTL KDRNPKYPRIS TPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI
Sbjct: 36  IRTSVTFHRPKTLKKDRNPKYPRISVTPRNKLDQYQILKYPLTTESAMKKIEDNNTLVFI 95

Query: 391 VDIRANXXXXXXXXXXMYDIQT 456
           VDIRA+          MYDIQT
Sbjct: 96  VDIRADKKKIKDAVKKMYDIQT 117



 Score = 85.5 bits (210), Expect(2) = 6e-50
 Identities = 41/41 (100%), Positives = 41/41 (100%)
 Frame = +3

Query: 507 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 629
           MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII
Sbjct: 112 MYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 152


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