BLASTX nr result

ID: Bupleurum21_contig00002268 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002268
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321226.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]         469   e-130
gb|ADR71225.1| 60S ribosomal protein L5A [Hevea brasiliensis]         468   e-129
gb|ABK93596.1| unknown [Populus trichocarpa]                          468   e-129
ref|XP_002329431.1| predicted protein [Populus trichocarpa] gi|1...   465   e-129

>ref|XP_002321226.1| predicted protein [Populus trichocarpa] gi|222861999|gb|EEE99541.1|
            predicted protein [Populus trichocarpa]
          Length = 298

 Score =  469 bits (1208), Expect = e-130
 Identities = 237/291 (81%), Positives = 253/291 (86%)
 Frame = -3

Query: 1096 MVFVKANKPRAYXXXXXXXXXXXREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNMDI 917
            M F KA K RAY           REGKTDYRARIRLINQDKNKYNTPKYRFV+RFTN DI
Sbjct: 1    MAFAKAQKSRAYYKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVMRFTNKDI 60

Query: 916  TAQIISASIAGDMVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 737
            TAQII AS+AGD+V+AAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE
Sbjct: 61   TAQIIHASMAGDIVVAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 120

Query: 736  GNVEATGEDYSVEPAESRRPFRALLDVGLLRTTTGNRVFXXXXXXXXXXXDIPHSEKRFA 557
            GNVEATGEDYSVEPA+SRRPFRALLDVGL+RTTTGNRVF           DIPHS+KRFA
Sbjct: 121  GNVEATGEDYSVEPADSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 556  GFSKDSKQLDAEVHHKYIYGGHVAAYMKTLMEDEPEKYQTHFSLYAKKGIEADNIEELYK 377
            GF+KD KQLDAEVH KYIYGGHVAAYM+ LMEDEPEKYQ+HFS Y K+GIE DN+EELYK
Sbjct: 181  GFNKDGKQLDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKRGIEPDNMEELYK 240

Query: 376  KVHAAIRADPTVKKSEKQPPKEHKRFNLKKLTYDERKNKLIERLNALNNAA 224
            KVHAAIRADPT KKSEKQ PKEHKR+NLKKLTY+ERK KL+ERL ALN+AA
Sbjct: 241  KVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVERLKALNSAA 291


>gb|ADR71226.1| 60S ribosomal protein L5B [Hevea brasiliensis]
          Length = 298

 Score =  469 bits (1206), Expect = e-130
 Identities = 237/291 (81%), Positives = 253/291 (86%)
 Frame = -3

Query: 1096 MVFVKANKPRAYXXXXXXXXXXXREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNMDI 917
            M FVKA K +AY           REGKTDYRARIRLINQDKNKYNTPKYRFVVRF+N DI
Sbjct: 1    MAFVKAQKTKAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDI 60

Query: 916  TAQIISASIAGDMVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 737
             AQIISASIAGDMVLAAAYSHELP++GLEVGLTNYAAAYCTGLLLARR LKKLEMDEEYE
Sbjct: 61   VAQIISASIAGDMVLAAAYSHELPQFGLEVGLTNYAAAYCTGLLLARRTLKKLEMDEEYE 120

Query: 736  GNVEATGEDYSVEPAESRRPFRALLDVGLLRTTTGNRVFXXXXXXXXXXXDIPHSEKRFA 557
            GN EATGEDYSVEPAE+RRPFRALLDVGL+RTTTGN VF           DIPHS+KRFA
Sbjct: 121  GNEEATGEDYSVEPAETRRPFRALLDVGLVRTTTGNHVFGALKGALDGGLDIPHSDKRFA 180

Query: 556  GFSKDSKQLDAEVHHKYIYGGHVAAYMKTLMEDEPEKYQTHFSLYAKKGIEADNIEELYK 377
            GFSKDSKQLDAEVH KYIYGGHVAAYM+TLMEDEPEKYQ HFS Y K+GIE D++EELYK
Sbjct: 181  GFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQLHFSEYIKRGIEPDDMEELYK 240

Query: 376  KVHAAIRADPTVKKSEKQPPKEHKRFNLKKLTYDERKNKLIERLNALNNAA 224
            KVHAAIRADPT KKSEKQPPKEHKR+NL+K+TY+ERK KLIERL ALN+AA
Sbjct: 241  KVHAAIRADPTAKKSEKQPPKEHKRYNLRKMTYEERKAKLIERLQALNSAA 291


>gb|ADR71225.1| 60S ribosomal protein L5A [Hevea brasiliensis]
          Length = 298

 Score =  468 bits (1205), Expect = e-129
 Identities = 237/291 (81%), Positives = 253/291 (86%)
 Frame = -3

Query: 1096 MVFVKANKPRAYXXXXXXXXXXXREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNMDI 917
            M FVKA K +AY           REGKTDYRARIRLINQDKNKYNTPKYRFVVRF+N DI
Sbjct: 1    MAFVKAQKTKAYFKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDI 60

Query: 916  TAQIISASIAGDMVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 737
             AQIISASIAGDMVLAAAYSHELP++GLEVGLTNYAAAYCTGLLLARR LKKLEMDEEYE
Sbjct: 61   VAQIISASIAGDMVLAAAYSHELPQFGLEVGLTNYAAAYCTGLLLARRTLKKLEMDEEYE 120

Query: 736  GNVEATGEDYSVEPAESRRPFRALLDVGLLRTTTGNRVFXXXXXXXXXXXDIPHSEKRFA 557
            GN EATGEDYSVEPAE+RRPFRALLDVGL+RTTTGNRVF           DIPHS+KRFA
Sbjct: 121  GNEEATGEDYSVEPAETRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 556  GFSKDSKQLDAEVHHKYIYGGHVAAYMKTLMEDEPEKYQTHFSLYAKKGIEADNIEELYK 377
            GFSKDSKQLDAEVH KYIYGGHVAAYM+ LMEDEPEKYQ HFS Y K+GIE D++EELYK
Sbjct: 181  GFSKDSKQLDAEVHRKYIYGGHVAAYMRMLMEDEPEKYQLHFSEYIKRGIEPDDMEELYK 240

Query: 376  KVHAAIRADPTVKKSEKQPPKEHKRFNLKKLTYDERKNKLIERLNALNNAA 224
            KVHAAIRADPT KKSEKQPPKEHKR+NL+K+TY+ERK KLIERL ALN+AA
Sbjct: 241  KVHAAIRADPTAKKSEKQPPKEHKRYNLRKMTYEERKAKLIERLQALNSAA 291


>gb|ABK93596.1| unknown [Populus trichocarpa]
          Length = 298

 Score =  468 bits (1203), Expect = e-129
 Identities = 236/291 (81%), Positives = 252/291 (86%)
 Frame = -3

Query: 1096 MVFVKANKPRAYXXXXXXXXXXXREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNMDI 917
            M F KA K RAY           REGKTDYRARIRLINQDKNKYNTPKYRFV+RFTN DI
Sbjct: 1    MAFAKAQKSRAYCKRFQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVMRFTNKDI 60

Query: 916  TAQIISASIAGDMVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 737
            TAQII AS+AGD+V+AAAYSHELP YGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE
Sbjct: 61   TAQIIHASMAGDIVVAAAYSHELPHYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 120

Query: 736  GNVEATGEDYSVEPAESRRPFRALLDVGLLRTTTGNRVFXXXXXXXXXXXDIPHSEKRFA 557
            GNVEATGEDYSVEPA+SRRPFRALLDVGL+RTTTGNRVF           DIPHS+KRFA
Sbjct: 121  GNVEATGEDYSVEPADSRRPFRALLDVGLVRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 556  GFSKDSKQLDAEVHHKYIYGGHVAAYMKTLMEDEPEKYQTHFSLYAKKGIEADNIEELYK 377
            GF+KD KQLDAEVH KYIYGGHVAAYM+ LMEDEPEKYQ+HFS Y K+GIE DN+EELYK
Sbjct: 181  GFNKDGKQLDAEVHRKYIYGGHVAAYMRNLMEDEPEKYQSHFSEYIKRGIEPDNMEELYK 240

Query: 376  KVHAAIRADPTVKKSEKQPPKEHKRFNLKKLTYDERKNKLIERLNALNNAA 224
            KVHAAIRADPT KKSEKQ PKEHKR+NLKKLTY+ERK KL+ERL ALN+AA
Sbjct: 241  KVHAAIRADPTAKKSEKQLPKEHKRYNLKKLTYEERKAKLVERLKALNSAA 291


>ref|XP_002329431.1| predicted protein [Populus trichocarpa] gi|118486443|gb|ABK95061.1|
            unknown [Populus trichocarpa] gi|222870481|gb|EEF07612.1|
            predicted protein [Populus trichocarpa]
          Length = 297

 Score =  465 bits (1197), Expect = e-129
 Identities = 234/291 (80%), Positives = 252/291 (86%)
 Frame = -3

Query: 1096 MVFVKANKPRAYXXXXXXXXXXXREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNMDI 917
            M F KA K RAY           R GKTDYRARIRLINQDKNKYNTPKYRFVVRFTN DI
Sbjct: 1    MAFAKAQKSRAYFKRYQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 916  TAQIISASIAGDMVLAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKKLEMDEEYE 737
             AQI SASIAGD+VLA+AY+HELPRYGLE GLTNYAAAYCTGLLLARRVLK LEMD+EYE
Sbjct: 61   IAQIASASIAGDIVLASAYAHELPRYGLEAGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 736  GNVEATGEDYSVEPAESRRPFRALLDVGLLRTTTGNRVFXXXXXXXXXXXDIPHSEKRFA 557
            GNVEATGED+SVEPA+SRRPFRALLDVGLLRTTTGNRVF           DIPHS+KRFA
Sbjct: 121  GNVEATGEDFSVEPADSRRPFRALLDVGLLRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 556  GFSKDSKQLDAEVHHKYIYGGHVAAYMKTLMEDEPEKYQTHFSLYAKKGIEADNIEELYK 377
            GF+KD+KQLDAEVH KYIYGGHVAAYM+TLMEDEPEKYQ+HFS Y K+GI+AD +E LYK
Sbjct: 181  GFAKDNKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFSEYLKRGIDADGMEALYK 240

Query: 376  KVHAAIRADPTVKKSEKQPPKEHKRFNLKKLTYDERKNKLIERLNALNNAA 224
            KVHAAIRADPT KKSEKQPPKEHKR+NLKKLTY+ERK KL+ERLNALN+AA
Sbjct: 241  KVHAAIRADPTAKKSEKQPPKEHKRYNLKKLTYEERKAKLVERLNALNSAA 291


Top