BLASTX nr result

ID: Bupleurum21_contig00002250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002250
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531273.1| PREDICTED: uncharacterized protein LOC100819...   222   3e-56
ref|XP_003531272.1| PREDICTED: uncharacterized protein LOC100819...   222   3e-56
ref|XP_003629923.1| YTH domain family protein [Medicago truncatu...   219   3e-55
ref|XP_003524996.1| PREDICTED: uncharacterized protein LOC100807...   213   1e-53
ref|XP_004144062.1| PREDICTED: uncharacterized protein LOC101215...   211   7e-53

>ref|XP_003531273.1| PREDICTED: uncharacterized protein LOC100819200 isoform 2 [Glycine
           max]
          Length = 659

 Score =  222 bits (565), Expect = 3e-56
 Identities = 111/177 (62%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   RTSGFGWLSVDSKYKPRGRINGLFGYGNENMDGLNELNRGPRAKSSKNQKGFTPVALAVK 181
           R +G  WL+VDSKYK RGR  G FGYGNEN+DGLNELNRGPRAK  KNQKGF P  LAVK
Sbjct: 360 RANGRAWLAVDSKYKTRGRSGGYFGYGNENVDGLNELNRGPRAKGGKNQKGFAPTILAVK 419

Query: 182 GQNIPLTETNDAEKDKPSMDNDREQYNRADFPETYADAKFFIIKSY-XXXXXXXXXXXXX 358
           GQN+P +   D EKDK S   DR+QYN+ADFPE Y DAKFF+IKSY              
Sbjct: 420 GQNLPASLGTDEEKDKTSTVPDRDQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVW 479

Query: 359 XXXXXXXXXXXXXXXXAQQKSGGCPIFLLFSVNTSGQFVGIAEMIGPVDFNKSLEYW 529
                           AQQK GGCP+FL FSVNTSGQFVG+AEMIGPVDFNKS+EYW
Sbjct: 480 ASTQNGNKKLDAAYHEAQQKPGGCPVFLFFSVNTSGQFVGLAEMIGPVDFNKSVEYW 536


>ref|XP_003531272.1| PREDICTED: uncharacterized protein LOC100819200 isoform 1 [Glycine
           max]
          Length = 707

 Score =  222 bits (565), Expect = 3e-56
 Identities = 111/177 (62%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   RTSGFGWLSVDSKYKPRGRINGLFGYGNENMDGLNELNRGPRAKSSKNQKGFTPVALAVK 181
           R +G  WL+VDSKYK RGR  G FGYGNEN+DGLNELNRGPRAK  KNQKGF P  LAVK
Sbjct: 360 RANGRAWLAVDSKYKTRGRSGGYFGYGNENVDGLNELNRGPRAKGGKNQKGFAPTILAVK 419

Query: 182 GQNIPLTETNDAEKDKPSMDNDREQYNRADFPETYADAKFFIIKSY-XXXXXXXXXXXXX 358
           GQN+P +   D EKDK S   DR+QYN+ADFPE Y DAKFF+IKSY              
Sbjct: 420 GQNLPASLGTDEEKDKTSTVPDRDQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVW 479

Query: 359 XXXXXXXXXXXXXXXXAQQKSGGCPIFLLFSVNTSGQFVGIAEMIGPVDFNKSLEYW 529
                           AQQK GGCP+FL FSVNTSGQFVG+AEMIGPVDFNKS+EYW
Sbjct: 480 ASTQNGNKKLDAAYHEAQQKPGGCPVFLFFSVNTSGQFVGLAEMIGPVDFNKSVEYW 536


>ref|XP_003629923.1| YTH domain family protein [Medicago truncatula]
           gi|355523945|gb|AET04399.1| YTH domain family protein
           [Medicago truncatula]
          Length = 677

 Score =  219 bits (557), Expect = 3e-55
 Identities = 113/177 (63%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   RTSGFGWLSVDSKYKPRGRINGLFGYGNENMDGLNELNRGPRAKSSKNQKGFTPVALAVK 181
           RT+G  WL+VD+KYK RGR  G FGYGNEN DGLNELNRGPRAK  KNQK F P  L VK
Sbjct: 325 RTNGRAWLAVDNKYKTRGRNGGYFGYGNENTDGLNELNRGPRAKGGKNQKVFVPTVLTVK 384

Query: 182 GQNIPLTETNDAEKDKPSMDNDREQYNRADFPETYADAKFFIIKSY-XXXXXXXXXXXXX 358
           GQN+P+  T D EK+K S   DREQYN+ADFPE Y DAKFF+IKSY              
Sbjct: 385 GQNVPV-NTVDEEKEKNSTTPDREQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVW 443

Query: 359 XXXXXXXXXXXXXXXXAQQKSGGCPIFLLFSVNTSGQFVGIAEMIGPVDFNKSLEYW 529
                           AQQKSGGCPIFLLFSVNTSGQFVG+AEM GPVDFNKSLEYW
Sbjct: 444 ASTQNGNKKLDAAYQEAQQKSGGCPIFLLFSVNTSGQFVGLAEMTGPVDFNKSLEYW 500


>ref|XP_003524996.1| PREDICTED: uncharacterized protein LOC100807919 [Glycine max]
          Length = 660

 Score =  213 bits (543), Expect = 1e-53
 Identities = 109/177 (61%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   RTSGFGWLSVDSKYKPRGRINGLFGYGNENMDGLNELNRGPRAKSSKNQKGFTPVALAVK 181
           RT+G  WL+VDSKYK RGR  G FGYGNEN DGLNELNRGPRAK  KNQKGF P  LAVK
Sbjct: 360 RTNGRAWLAVDSKYKTRGRSGGYFGYGNENADGLNELNRGPRAKGGKNQKGFAPTILAVK 419

Query: 182 GQNIPLTETNDAEKDKPSMDNDREQYNRADFPETYADAKFFIIKSY-XXXXXXXXXXXXX 358
           GQ +P T   D EKDK S   + +QYN+ADFPE Y DAKFF+IKSY              
Sbjct: 420 GQTLPATLGTDEEKDKTSTILECDQYNKADFPEEYTDAKFFVIKSYSEDDIHKSIKYNVW 479

Query: 359 XXXXXXXXXXXXXXXXAQQKSGGCPIFLLFSVNTSGQFVGIAEMIGPVDFNKSLEYW 529
                           AQQK GG P+FL FSVNTSGQFVG+AEMIGPVDFNKS+EYW
Sbjct: 480 ASTQNGNKKLDAAYQEAQQKPGGTPVFLFFSVNTSGQFVGLAEMIGPVDFNKSVEYW 536


>ref|XP_004144062.1| PREDICTED: uncharacterized protein LOC101215929 [Cucumis sativus]
           gi|449493566|ref|XP_004159352.1| PREDICTED:
           uncharacterized LOC101215929 [Cucumis sativus]
          Length = 704

 Score =  211 bits (536), Expect = 7e-53
 Identities = 108/178 (60%), Positives = 127/178 (71%), Gaps = 2/178 (1%)
 Frame = +2

Query: 2   RTSGFGWLSVDSKYKPRGRINGLFGYGNENMDGLNELNRGPRAKSSKNQKGFTPVALAVK 181
           R++G  WL+VD+K+KPRGR  G +GYGNENMDGLNELNRGPRAK SKNQKGF P  LAVK
Sbjct: 361 RSNGRVWLAVDNKFKPRGRNGGYYGYGNENMDGLNELNRGPRAKGSKNQKGFVPSVLAVK 420

Query: 182 GQNI-PLTETNDAEKDKPSMDNDREQYNRADFPETYADAKFFIIKSY-XXXXXXXXXXXX 355
           GQ + P+  T++ EKDK S   DR+QYN++DFPE YA+AKFF+IKSY             
Sbjct: 421 GQLLPPMNATDEEEKDKVSTP-DRDQYNKSDFPEEYAEAKFFVIKSYSEDDVHKSIKYNV 479

Query: 356 XXXXXXXXXXXXXXXXXAQQKSGGCPIFLLFSVNTSGQFVGIAEMIGPVDFNKSLEYW 529
                            AQ+K+GGCPIFL FSVNTSGQFVG+AEMIGPVDF K+LEYW
Sbjct: 480 WASTPNGNKKLDAAYQEAQEKAGGCPIFLFFSVNTSGQFVGLAEMIGPVDFQKNLEYW 537


Top