BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002241
         (980 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-l...   189   1e-45
ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-l...   189   1e-45
ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l...   187   3e-45
emb|CBI36838.3| unnamed protein product [Vitis vinifera]              186   6e-45
ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-l...   186   6e-45

>ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 149

 Score =  189 bits (479), Expect = 1e-45
 Identities = 94/121 (77%), Positives = 95/121 (78%)
 Frame = +1

Query: 205 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 384
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 385 IRGNTIKYLRVPDEVIDKVQEETKSXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGRGTD 564
           IRGNTIKYLRVPDEVIDKVQEETKS                         PAKGMGRG D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKS-RADRKPLGVGRGRGRGREDGPGGRPAKGMGRGFD 119

Query: 565 D 567
           D
Sbjct: 120 D 120


>ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 149

 Score =  189 bits (479), Expect = 1e-45
 Identities = 94/121 (77%), Positives = 95/121 (78%)
 Frame = +1

Query: 205 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 384
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 385 IRGNTIKYLRVPDEVIDKVQEETKSXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGRGTD 564
           IRGNTIKYLRVPDEVIDKVQEETKS                         PAKGMGRG D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKS-RADRKPLGVGRGRGRGREDGPGGRPAKGMGRGFD 119

Query: 565 D 567
           D
Sbjct: 120 D 120


>ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 148

 Score =  187 bits (476), Expect = 3e-45
 Identities = 93/121 (76%), Positives = 95/121 (78%)
 Frame = +1

Query: 205 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 384
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 385 IRGNTIKYLRVPDEVIDKVQEETKSXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGRGTD 564
           IRGNTIKYLRVPDEVIDKVQEETKS                         PAKG+GRG D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKS-RADRKPPGVGRGRGRGREDGPGGRPAKGIGRGLD 119

Query: 565 D 567
           D
Sbjct: 120 D 120


>emb|CBI36838.3| unnamed protein product [Vitis vinifera]
          Length = 196

 Score =  186 bits (473), Expect = 6e-45
 Identities = 92/121 (76%), Positives = 95/121 (78%)
 Frame = +1

Query: 205 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 384
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 47  MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 106

Query: 385 IRGNTIKYLRVPDEVIDKVQEETKSXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGRGTD 564
           IRGNTIKYLRVPDEVIDKVQEETK+                         PAKG+GRG D
Sbjct: 107 IRGNTIKYLRVPDEVIDKVQEETKN-RADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLD 165

Query: 565 D 567
           D
Sbjct: 166 D 166


>ref|XP_002264738.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Vitis vinifera]
          Length = 150

 Score =  186 bits (473), Expect = 6e-45
 Identities = 92/121 (76%), Positives = 95/121 (78%)
 Frame = +1

Query: 205 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDKFWRMPECY 384
           MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGD+FWRMPECY
Sbjct: 1   MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60

Query: 385 IRGNTIKYLRVPDEVIDKVQEETKSXXXXXXXXXXXXXXXXXXXXXXXXXPAKGMGRGTD 564
           IRGNTIKYLRVPDEVIDKVQEETK+                         PAKG+GRG D
Sbjct: 61  IRGNTIKYLRVPDEVIDKVQEETKN-RADRKPPGVGRGRGRGREDGSSGRPAKGIGRGLD 119

Query: 565 D 567
           D
Sbjct: 120 D 120