BLASTX nr result

ID: Bupleurum21_contig00002227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002227
         (581 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloro...   160   2e-37
ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus...   157   2e-36
ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
gb|ABK94900.1| unknown [Populus trichocarpa]                          150   2e-34
ref|XP_002327335.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34

>ref|XP_002272295.1| PREDICTED: 50S ribosomal protein L21, chloroplastic [Vitis
           vinifera] gi|297745266|emb|CBI40346.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score =  160 bits (404), Expect = 2e-37
 Identities = 78/120 (65%), Positives = 92/120 (76%)
 Frame = +2

Query: 8   EEPKKEDVFAVVMIGGRQYIVFPGRFLYTQRLSGANVNDKVILNKVLLVGTKTSTYLGQX 187
           E PK+E++FAVVMIG RQYIVFPGR++YTQRL GA+VNDK+ILN+VLLVGTKTSTY+G+ 
Sbjct: 88  ELPKREEIFAVVMIGSRQYIVFPGRYIYTQRLKGADVNDKIILNRVLLVGTKTSTYIGKP 147

Query: 188 XXXXXXXXXXXEEQGLDDXXXXXXXXXXXNYRRNIGHRQPNTRIRIMGITGYENSPAITL 367
                      EEQGL+            NYRRNIGHRQPNTRIRI GITGY++SPA+TL
Sbjct: 148 VVPNAAVHAVVEEQGLNPKVMVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDSPAVTL 207


>ref|XP_002526817.1| 50S ribosomal protein L21, putative [Ricinus communis]
           gi|223533821|gb|EEF35552.1| 50S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 214

 Score =  157 bits (396), Expect = 2e-36
 Identities = 77/122 (63%), Positives = 90/122 (73%)
 Frame = +2

Query: 2   ATEEPKKEDVFAVVMIGGRQYIVFPGRFLYTQRLSGANVNDKVILNKVLLVGTKTSTYLG 181
           A EE K+E++FAVVM+GGRQYIV PGRF+Y QRL GANVNDKV LNKVLLVGT+T+TY+G
Sbjct: 91  AKEETKREEIFAVVMVGGRQYIVIPGRFIYVQRLKGANVNDKVALNKVLLVGTRTTTYIG 150

Query: 182 QXXXXXXXXXXXXEEQGLDDXXXXXXXXXXXNYRRNIGHRQPNTRIRIMGITGYENSPAI 361
           +            EEQGL+            NYRRNIGHRQPNTRIRI GITGY++ PA+
Sbjct: 151 KPVVTNAVVHAVVEEQGLNPKVVVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPAV 210

Query: 362 TL 367
           TL
Sbjct: 211 TL 212


>ref|XP_002325555.1| predicted protein [Populus trichocarpa] gi|222862430|gb|EEE99936.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score =  150 bits (379), Expect = 2e-34
 Identities = 76/123 (61%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   ATEEP-KKEDVFAVVMIGGRQYIVFPGRFLYTQRLSGANVNDKVILNKVLLVGTKTSTYL 178
           A EEP K+E++FAVVM+G RQYIV PGR+LY QRL GANVNDK++LNKVLLVGT+TS Y+
Sbjct: 82  AKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVLLVGTRTSAYI 141

Query: 179 GQXXXXXXXXXXXXEEQGLDDXXXXXXXXXXXNYRRNIGHRQPNTRIRIMGITGYENSPA 358
           G+            EEQGLD            NYRRNIGHRQPNTRIRI GITGY++ P 
Sbjct: 142 GKPVVTNASVHAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRITGITGYQDFPV 201

Query: 359 ITL 367
            TL
Sbjct: 202 STL 204


>gb|ABK94900.1| unknown [Populus trichocarpa]
          Length = 225

 Score =  150 bits (379), Expect = 2e-34
 Identities = 76/123 (61%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   ATEEP-KKEDVFAVVMIGGRQYIVFPGRFLYTQRLSGANVNDKVILNKVLLVGTKTSTYL 178
           A EEP K+E++FAVVM+G RQYIV PGR+LY QRL GANVNDK++LNKVLLVGT+TS Y+
Sbjct: 101 AKEEPTKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKIVLNKVLLVGTRTSAYI 160

Query: 179 GQXXXXXXXXXXXXEEQGLDDXXXXXXXXXXXNYRRNIGHRQPNTRIRIMGITGYENSPA 358
           G+            EEQGLD            NYRRNIGHRQPNTRIRI GITGY++ P 
Sbjct: 161 GKPVVTNASVHAVVEEQGLDAKKIVFKYKRKKNYRRNIGHRQPNTRIRITGITGYQDFPV 220

Query: 359 ITL 367
            TL
Sbjct: 221 STL 223


>ref|XP_002327335.1| predicted protein [Populus trichocarpa] gi|222835705|gb|EEE74140.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  149 bits (377), Expect = 3e-34
 Identities = 75/120 (62%), Positives = 85/120 (70%)
 Frame = +2

Query: 8   EEPKKEDVFAVVMIGGRQYIVFPGRFLYTQRLSGANVNDKVILNKVLLVGTKTSTYLGQX 187
           E PK+E++FAVVM+G RQYIV PGR+LY QRL GANVNDKV LNKVLLVGT+TS Y+G+ 
Sbjct: 106 EPPKREEIFAVVMVGSRQYIVIPGRWLYVQRLKGANVNDKVNLNKVLLVGTRTSAYIGKP 165

Query: 188 XXXXXXXXXXXEEQGLDDXXXXXXXXXXXNYRRNIGHRQPNTRIRIMGITGYENSPAITL 367
                      EEQGLD            NYRRNIGHRQPNTRIRI GITGY++ P  TL
Sbjct: 166 VVTNATVHAVVEEQGLDAKKIVFKYKKKKNYRRNIGHRQPNTRIRITGITGYQDYPVSTL 225


Top