BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002220
         (999 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase...   285   1e-74
gb|AFK34410.1| unknown [Lotus japonicus]                              263   4e-68
ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai...   261   2e-67
gb|AFK37376.1| unknown [Lotus japonicus]                              261   2e-67
ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycin...   256   5e-66

>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
           chloroplastic [Vitis vinifera]
           gi|297735404|emb|CBI17844.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  285 bits (729), Expect = 1e-74
 Identities = 129/167 (77%), Positives = 144/167 (86%)
 Frame = +3

Query: 291 MSAASFSAPVAGSTYVGLKPNPSKLFQMKDSVAWNKKTVSNGSKTQCMKVWNPIDNKKFE 470
           M+A   S PV    YVGLKP+  KLF  KDSVAW++KTVSNGSKT CMK WNPI+NKKFE
Sbjct: 1   MAAGILSGPVTSFGYVGLKPHQPKLFPAKDSVAWSRKTVSNGSKTHCMKTWNPINNKKFE 60

Query: 471 TLSYLPPLTDDSIAREIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTMWKLPM 650
           TLSYLPPL+DDSIA+EIDYM+KKGWIPCLEFD +GYV+R+NS+IP YYDGRYWT+WKLPM
Sbjct: 61  TLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVFRKNSQIPGYYDGRYWTLWKLPM 120

Query: 651 FGCTDASQVLHEIAECKKAYPTAYIRCLAFDNIRQAQCMSFVIQKPT 791
           FGC DASQVL+EI ECKK YP AYIRCLAFDN  Q QCM+FVIQKPT
Sbjct: 121 FGCNDASQVLNEIHECKKTYPNAYIRCLAFDNEHQGQCMAFVIQKPT 167


>gb|AFK34410.1| unknown [Lotus japonicus]
          Length = 173

 Score =  263 bits (673), Expect = 4e-68
 Identities = 118/170 (69%), Positives = 140/170 (82%)
 Frame = +3

Query: 291 MSAASFSAPVAGSTYVGLKPNPSKLFQMKDSVAWNKKTVSNGSKTQCMKVWNPIDNKKFE 470
           MSA +F+A VAG+ +VGLK N S L+ +     W  KT SNGSKT CMK WNPI+N+KFE
Sbjct: 1   MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWRSKTTSNGSKTLCMKTWNPINNRKFE 60

Query: 471 TLSYLPPLTDDSIAREIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTMWKLPM 650
           TLSYLPPLTD+SIA+E+DYM+KKGWIPCLEFD LG++ RENSR+P YYDGRYWT+WKLPM
Sbjct: 61  TLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPM 120

Query: 651 FGCTDASQVLHEIAECKKAYPTAYIRCLAFDNIRQAQCMSFVIQKPTDTT 800
           FGC D+SQVL+EI ECK+AYP AYIRC+AFDN R  Q M+F+IQKP   T
Sbjct: 121 FGCNDSSQVLNEIQECKRAYPNAYIRCIAFDNHRHMQSMAFIIQKPAANT 170


>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
           gi|355511150|gb|AES92292.1| Ribulose bisphosphate
           carboxylase small chain [Medicago truncatula]
           gi|388491552|gb|AFK33842.1| unknown [Medicago
           truncatula]
          Length = 173

 Score =  261 bits (667), Expect = 2e-67
 Identities = 121/171 (70%), Positives = 138/171 (80%), Gaps = 1/171 (0%)
 Frame = +3

Query: 291 MSAASFSAPVAGSTYVGLKPNPSKLFQMKD-SVAWNKKTVSNGSKTQCMKVWNPIDNKKF 467
           MSA +F+APVAG  +VGLK N S L+     S+ W KKTVSNGSK  CMK WNPI+NKKF
Sbjct: 1   MSAGTFAAPVAGPGFVGLKSNSSSLWPSATYSIEWKKKTVSNGSKIHCMKTWNPINNKKF 60

Query: 468 ETLSYLPPLTDDSIAREIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTMWKLP 647
           ETLSYLPPL+DDSIA+EIDYM+KK W PCLEFD  G ++R NS++P YYDGRYWT+WKLP
Sbjct: 61  ETLSYLPPLSDDSIAKEIDYMLKKRWTPCLEFDEFGCIHRANSQMPGYYDGRYWTLWKLP 120

Query: 648 MFGCTDASQVLHEIAECKKAYPTAYIRCLAFDNIRQAQCMSFVIQKPTDTT 800
           MFGC D+SQVL+EI ECKK YP AYIRCLAFDN R  Q M+FVI KPT TT
Sbjct: 121 MFGCNDSSQVLNEINECKKTYPNAYIRCLAFDNKRHMQAMAFVIHKPTTTT 171


>gb|AFK37376.1| unknown [Lotus japonicus]
          Length = 173

 Score =  261 bits (666), Expect = 2e-67
 Identities = 117/170 (68%), Positives = 139/170 (81%)
 Frame = +3

Query: 291 MSAASFSAPVAGSTYVGLKPNPSKLFQMKDSVAWNKKTVSNGSKTQCMKVWNPIDNKKFE 470
           MSA +F+A VAG+ +VGLK N S L+ +     W  KT SNGSKT CMK WNPI+N+KFE
Sbjct: 1   MSAGTFTALVAGAGFVGLKSNSSNLYPVTGFNEWKSKTTSNGSKTLCMKTWNPINNRKFE 60

Query: 471 TLSYLPPLTDDSIAREIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTMWKLPM 650
           TLSYLPPLTD+SIA+E+DYM+KKGWIPCLEFD LG++ RENSR+P YYDGRYWT+WKLPM
Sbjct: 61  TLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGHIRRENSRMPGYYDGRYWTLWKLPM 120

Query: 651 FGCTDASQVLHEIAECKKAYPTAYIRCLAFDNIRQAQCMSFVIQKPTDTT 800
           F C D+SQVL+EI ECK+AYP AYIRC+AFDN R  Q M+F+IQKP   T
Sbjct: 121 FDCNDSSQVLNEIQECKRAYPNAYIRCIAFDNHRHMQSMAFIIQKPAANT 170


>ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycine max]
           gi|255632934|gb|ACU16821.1| unknown [Glycine max]
          Length = 172

 Score =  256 bits (655), Expect = 5e-66
 Identities = 116/170 (68%), Positives = 137/170 (80%)
 Frame = +3

Query: 291 MSAASFSAPVAGSTYVGLKPNPSKLFQMKDSVAWNKKTVSNGSKTQCMKVWNPIDNKKFE 470
           MSAA+F+A +AG+ +VGLK N S L      + W +K VSNGSKT CMK WNPI+NKKFE
Sbjct: 1   MSAATFAAHIAGAGFVGLKSNSSNLCPSTGPIGWKRKIVSNGSKTYCMKTWNPINNKKFE 60

Query: 471 TLSYLPPLTDDSIAREIDYMMKKGWIPCLEFDALGYVYRENSRIPNYYDGRYWTMWKLPM 650
           TLSYLPPL+D+SIA+EIDYM+KKGWIPCLEFD LG V RENS +P YYDGRYWT+WKLPM
Sbjct: 61  TLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPEYYDGRYWTLWKLPM 120

Query: 651 FGCTDASQVLHEIAECKKAYPTAYIRCLAFDNIRQAQCMSFVIQKPTDTT 800
           F C+D+SQVL EI EC++ YP AYIRCLAFDN R  Q M+F++ KP  TT
Sbjct: 121 FACSDSSQVLKEIHECRRVYPNAYIRCLAFDNQRHMQSMAFIVHKPDITT 170