BLASTX nr result

ID: Bupleurum21_contig00002204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002204
         (1839 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communi...   706   0.0  
ref|XP_003595171.1| Nucleosome/chromatin assembly factor group [...   699   0.0  
gb|AFK36675.1| unknown [Medicago truncatula]                          698   0.0  
gb|AGG38122.1| FVE-2 protein [Dimocarpus longan]                      696   0.0  
ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein M...   692   0.0  

>ref|XP_002514113.1| WD-repeat protein, putative [Ricinus communis]
            gi|223546569|gb|EEF48067.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 503

 Score =  706 bits (1823), Expect = 0.0
 Identities = 343/499 (68%), Positives = 393/499 (78%), Gaps = 30/499 (6%)
 Frame = -2

Query: 1709 PNSQPKKRGR-PKGSKAKEERETSAKSVVKMRXXXXXXXXXGKKVAIDEKYMQWKSLVPV 1533
            P   PKKRGR PK  + K++++   +     +          ++  +DEKY QWKSLVPV
Sbjct: 4    PQQVPKKRGRKPKPKEDKDQQQQQQQQSAGSKMKEGKKSQQQQQHTVDEKYTQWKSLVPV 63

Query: 1532 LYDWFANHNLLWPSLSCRWGPLLEEANQKNRQRIYLSEQTDGSVPNTLVIANCEVVKKRV 1353
            LYDW ANHNL+WPSLSCRWGP LE+A  KNRQR+YLSEQTDGSVPNTLVIANCEVVK RV
Sbjct: 64   LYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRV 123

Query: 1352 AAGDHIAHFNEESRSPFVKKYKTIIHPGEVNRIREFPQYNSIVATHTDCPEVLIWDIEAQ 1173
            AA +HIA FNEE+RSPFVKKYKTIIHPGEVNRIRE PQ + IVATHTD P+VLIWD+EAQ
Sbjct: 124  AAAEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATHTDGPDVLIWDVEAQ 183

Query: 1172 PNRHAVFGAAESRPDLVLTGHEDNAEYALAMSPTEPYVLSGGKDKNVILWSLQDHISAD- 996
            PNRHAV GA  SRPDL+LTGH+DNAE+ALAM PTEP+VLSGGKDK+V+LWS+QDHI+A  
Sbjct: 184  PNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTEPFVLSGGKDKSVVLWSIQDHITASA 243

Query: 995  ----------SSGSITK--------SAESPSIAPRGIFKGHEDTVEDVQFCPSSAQEFCS 870
                      S GSI K        +AESPS+ PRGI++GHEDTVEDV FCPSSAQEFCS
Sbjct: 244  TDPATAKSPGSGGSIIKRAGEGNDRAAESPSVGPRGIYQGHEDTVEDVTFCPSSAQEFCS 303

Query: 869  VGDDSCLILWDARTGSNPVIKVEKAHSADVHCVDWNPLDTNLILTGSADHSVCMFDRRN- 693
            VGDDSCLILWDAR GS+P +KVEKAH+AD+HCVDWNP D NLI+TGSAD+SV MFDRRN 
Sbjct: 304  VGDDSCLILWDARIGSSPAVKVEKAHNADLHCVDWNPHDNNLIITGSADNSVRMFDRRNL 363

Query: 692  ----IGSPVHKFEDHKAAVLCVQWCPDKSSVFGSSAEDGFLNIWDYERIGK-----TSVP 540
                +G+PV+KFE HKAAVLCVQW PDKSSVFGSSAEDG LNIWDY+++GK     T  P
Sbjct: 364  TSNGVGTPVYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKTERATRAP 423

Query: 539  NCPPGLFFKHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDMIYRPEE 360
            N P GLFF+HAGHRDKVVDFHWNASDPW                TLQIWRMSD+IYRPE+
Sbjct: 424  NSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCDTTGGGGTLQIWRMSDLIYRPED 483

Query: 359  EVITELEQYKAHVVECTSK 303
            EV+ ELE++K+HV+ECTSK
Sbjct: 484  EVLAELEKFKSHVIECTSK 502


>ref|XP_003595171.1| Nucleosome/chromatin assembly factor group [Medicago truncatula]
            gi|124360783|gb|ABN08755.1| WD40-like [Medicago
            truncatula] gi|217074306|gb|ACJ85513.1| unknown [Medicago
            truncatula] gi|355484219|gb|AES65422.1|
            Nucleosome/chromatin assembly factor group [Medicago
            truncatula]
          Length = 500

 Score =  699 bits (1803), Expect = 0.0
 Identities = 335/494 (67%), Positives = 385/494 (77%), Gaps = 19/494 (3%)
 Frame = -2

Query: 1727 PPMDSTPNSQPKKRGRPKGSKAKEERETSAKSV---VKMRXXXXXXXXXGKKVAIDEKYM 1557
            PP       +  +  +PK  + K E  +  KS     K +          ++ ++DEKY 
Sbjct: 4    PPSTGAVKKKETRGRKPKPKEDKREEPSQVKSPRESKKEKQQQQLHQQQQQQASVDEKYS 63

Query: 1556 QWKSLVPVLYDWFANHNLLWPSLSCRWGPLLEEANQKNRQRIYLSEQTDGSVPNTLVIAN 1377
            QWKSLVPVLYDW ANHNL+WPSLSCRWGP LE+A  KNRQR+YLSEQTDGSVPNTLVIAN
Sbjct: 64   QWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIAN 123

Query: 1376 CEVVKKRVAAGDHIAHFNEESRSPFVKKYKTIIHPGEVNRIREFPQYNSIVATHTDCPEV 1197
            CEVVK RVAA +HI+ FNEE+RSPFVKKYKTIIHPGEVNRIRE PQ + IVATHTD P+V
Sbjct: 124  CEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDV 183

Query: 1196 LIWDIEAQPNRHAVFGAAESRPDLVLTGHEDNAEYALAMSPTEPYVLSGGKDKNVILWSL 1017
            LIWD+E+QPNRHAV GA  SRPDL+LTGH+DNAE+ALAM PT+PYVLSGGKDK V+LWS+
Sbjct: 184  LIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTQPYVLSGGKDKTVVLWSI 243

Query: 1016 QDHI------SADSSGSITKSAESPSIAPRGIFKGHEDTVEDVQFCPSSAQEFCSVGDDS 855
            +DHI      S  S GSI K+A+SP++ PRGI+ GHEDTVEDV FCPSSAQEFCSVGDDS
Sbjct: 244  EDHITSAATDSNKSGGSIAKTADSPTVGPRGIYSGHEDTVEDVAFCPSSAQEFCSVGDDS 303

Query: 854  CLILWDARTGSNPVIKVEKAHSADVHCVDWNPLDTNLILTGSADHSVCMFDRRN-----I 690
            CLILWDAR GS+PV+KVEKAH AD+HCVDWNP D NLILTGSAD+S+ MFDRRN     +
Sbjct: 304  CLILWDARVGSSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSIRMFDRRNLTSNGV 363

Query: 689  GSPVHKFEDHKAAVLCVQWCPDKSSVFGSSAEDGFLNIWDYERIGKT-----SVPNCPPG 525
            GSP+HKFE HKAAVLCVQW PDKSSVFGSSAEDG LNIWDYE++GK         N PPG
Sbjct: 364  GSPIHKFEAHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERAGKTINSPPG 423

Query: 524  LFFKHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDMIYRPEEEVITE 345
            LFF+HAGHRDKVVDFHWNA DPW                TLQIWRMSD++YRPE+EV+ E
Sbjct: 424  LFFQHAGHRDKVVDFHWNAHDPWTLVSVSDDCESTGGGGTLQIWRMSDLLYRPEDEVLAE 483

Query: 344  LEQYKAHVVECTSK 303
            LE++K+HVV C +K
Sbjct: 484  LEKFKSHVVACAAK 497


>gb|AFK36675.1| unknown [Medicago truncatula]
          Length = 500

 Score =  698 bits (1802), Expect = 0.0
 Identities = 335/494 (67%), Positives = 385/494 (77%), Gaps = 19/494 (3%)
 Frame = -2

Query: 1727 PPMDSTPNSQPKKRGRPKGSKAKEERETSAKSV---VKMRXXXXXXXXXGKKVAIDEKYM 1557
            PP       +  +  +PK  + K E  +  KS     K +          ++ ++DEKY 
Sbjct: 4    PPSTGAVKKKETRGRKPKPKEDKREEPSQVKSPRESKKEKQQQQLHQQQQQQASVDEKYS 63

Query: 1556 QWKSLVPVLYDWFANHNLLWPSLSCRWGPLLEEANQKNRQRIYLSEQTDGSVPNTLVIAN 1377
            QWKSLVPVLYDW ANHNL+WPSLSCRWGP LE+A  KNRQR+YLSEQTDGSVPNTLVIAN
Sbjct: 64   QWKSLVPVLYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIAN 123

Query: 1376 CEVVKKRVAAGDHIAHFNEESRSPFVKKYKTIIHPGEVNRIREFPQYNSIVATHTDCPEV 1197
            CEVVK RVAA +HI+ FNEE+RSPFVKKYKTIIHPGEVNRIRE PQ + IVATHTD P+V
Sbjct: 124  CEVVKTRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDV 183

Query: 1196 LIWDIEAQPNRHAVFGAAESRPDLVLTGHEDNAEYALAMSPTEPYVLSGGKDKNVILWSL 1017
            LIWD+E+QPNRHAV GA  SRPDL+LTGH+DNAE+ALAM PT+PYVLSGGKDK V+LWS+
Sbjct: 184  LIWDVESQPNRHAVLGATNSRPDLILTGHQDNAEFALAMCPTQPYVLSGGKDKTVVLWSI 243

Query: 1016 QDHI------SADSSGSITKSAESPSIAPRGIFKGHEDTVEDVQFCPSSAQEFCSVGDDS 855
            +DHI      S  S GSI K+A+SP++ PRGI+ GHEDTVEDV FCPSSAQEFCSVGDDS
Sbjct: 244  EDHITSAATDSNKSGGSIAKTADSPTVGPRGIYSGHEDTVEDVAFCPSSAQEFCSVGDDS 303

Query: 854  CLILWDARTGSNPVIKVEKAHSADVHCVDWNPLDTNLILTGSADHSVCMFDRRN-----I 690
            CLILWDAR GS+PV+KVEKAH AD+HCVDWNP D NLILTGSAD+S+ MFDRRN     +
Sbjct: 304  CLILWDARVGSSPVVKVEKAHDADLHCVDWNPHDDNLILTGSADNSIRMFDRRNLTSNGV 363

Query: 689  GSPVHKFEDHKAAVLCVQWCPDKSSVFGSSAEDGFLNIWDYERIGKT-----SVPNCPPG 525
            GSP+HKFE HKAAVLCVQW PDKSSVFGSSAEDG LNIWDYE++GK         N PPG
Sbjct: 364  GSPIHKFEAHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKIERAGKTINFPPG 423

Query: 524  LFFKHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDMIYRPEEEVITE 345
            LFF+HAGHRDKVVDFHWNA DPW                TLQIWRMSD++YRPE+EV+ E
Sbjct: 424  LFFQHAGHRDKVVDFHWNAHDPWTLVSVSDDCESTGGGGTLQIWRMSDLLYRPEDEVLAE 483

Query: 344  LEQYKAHVVECTSK 303
            LE++K+HVV C +K
Sbjct: 484  LEKFKSHVVACAAK 497


>gb|AGG38122.1| FVE-2 protein [Dimocarpus longan]
          Length = 483

 Score =  696 bits (1796), Expect = 0.0
 Identities = 337/486 (69%), Positives = 385/486 (79%), Gaps = 21/486 (4%)
 Frame = -2

Query: 1697 PKKRGR---PKGSKAKEERETSAKSVVKMRXXXXXXXXXGKKVAIDEKYMQWKSLVPVLY 1527
            PKKRGR   PK  K  E + +  K     R             ++D+KY QWKSLVPVLY
Sbjct: 6    PKKRGRKPKPKEDKKDEPQPSQPKMKDSKRSHHH---------SVDDKYTQWKSLVPVLY 56

Query: 1526 DWFANHNLLWPSLSCRWGPLLEEANQKNRQRIYLSEQTDGSVPNTLVIANCEVVKKRVAA 1347
            DW ANHNL+WPSLSCRWGP LE+A  KNRQR+YLSEQTDGSVPNTLVIANCEVVK RVAA
Sbjct: 57   DWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAA 116

Query: 1346 GDHIAHFNEESRSPFVKKYKTIIHPGEVNRIREFPQYNSIVATHTDCPEVLIWDIEAQPN 1167
             +HI+ FNEE+RSPFVKKYKTIIHPGEVNRIRE PQ + IVATHTD P+VLIWD+EAQPN
Sbjct: 117  AEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSKIVATHTDSPDVLIWDVEAQPN 176

Query: 1166 RHAVFGAAESRPDLVLTGHEDNAEYALAMSPTEPYVLSGGKDKNVILWSLQDHISADSSG 987
            RHAV GA  SRPDL+LTGH+DNAE+ALAM PTEPYVLSGGKDK+V+LWS+QDHI++ S G
Sbjct: 177  RHAVLGANHSRPDLILTGHQDNAEFALAMCPTEPYVLSGGKDKSVVLWSIQDHIASSSGG 236

Query: 986  SI--------TKSAESPSIAPRGIFKGHEDTVEDVQFCPSSAQEFCSVGDDSCLILWDAR 831
            SI         K+A+ P+++PRGI+ GHEDTVEDV FCPSSAQEFCSVGDDSCLILWDAR
Sbjct: 237  SIIKQNSEGNDKNADGPTVSPRGIYYGHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDAR 296

Query: 830  TGSNPVIKVEKAHSADVHCVDWNPLDTNLILTGSADHSVCMFDRRN-----IGSPVHKFE 666
             GS+PV+KVEKAH+AD+HCVDWNP D N ILTGSAD+SV MFDRRN     +GSP+HKFE
Sbjct: 297  VGSSPVVKVEKAHNADLHCVDWNPHDDNYILTGSADNSVRMFDRRNLTSNGVGSPIHKFE 356

Query: 665  DHKAAVLCVQWCPDKSSVFGSSAEDGFLNIWDYERIGK-----TSVPNCPPGLFFKHAGH 501
             HKAAVLCVQW PDKSSVFGSSAEDG LNIWDY+++GK        P+ P GLFF+HAGH
Sbjct: 357  GHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYDKVGKKVEQGARSPSAPAGLFFQHAGH 416

Query: 500  RDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTLQIWRMSDMIYRPEEEVITELEQYKAHV 321
            RDKVVDFHWN+SDPW                TLQIWRMSD+IYRPE+EV+ EL+++K+HV
Sbjct: 417  RDKVVDFHWNSSDPWTVVSVSDDCDTTGGGGTLQIWRMSDLIYRPEDEVLAELDKFKSHV 476

Query: 320  VECTSK 303
            V C SK
Sbjct: 477  VSCASK 482


>ref|XP_004158447.1| PREDICTED: WD-40 repeat-containing protein MSI4-like [Cucumis
            sativus]
          Length = 518

 Score =  692 bits (1785), Expect = 0.0
 Identities = 337/513 (65%), Positives = 395/513 (76%), Gaps = 31/513 (6%)
 Frame = -2

Query: 1748 EAEENKKPPMDSTPNSQPKK-RGR-PKGSKAKEERETSAKSVVKMRXXXXXXXXXGKKVA 1575
            + ++   PP   TP  + K+ RGR PK    K++ + + K   + +             +
Sbjct: 17   QQQQPPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQLTKKMKAQQQP------------S 64

Query: 1574 IDEKYMQWKSLVPVLYDWFANHNLLWPSLSCRWGPLLEEANQKNRQRIYLSEQTDGSVPN 1395
            +DE+Y QWKSLVPVLYDWFANHNL+WPSLSCRWGP LE+A  KNRQR+YLSEQTDGSVPN
Sbjct: 65   VDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGSVPN 124

Query: 1394 TLVIANCEVVKKRVAAGDHIAHFNEESRSPFVKKYKTIIHPGEVNRIREFPQYNSIVATH 1215
            TLVIANCEVVK RVAA +HI+ FNEE+RSPFVKKYKTIIHPGEVNRIRE PQ + IVATH
Sbjct: 125  TLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRIVATH 184

Query: 1214 TDCPEVLIWDIEAQPNRHAVFGAAESRPDLVLTGHEDNAEYALAMSPTEPYVLSGGKDKN 1035
            TD P+VLIWD+EAQPNRHAV GA  SRPDL+LTGH++NAE+ALAM PTEPYVLSGGKDK 
Sbjct: 185  TDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGGKDKL 244

Query: 1034 VILWSLQDHI-----------SADSSGSI--------TKSAESPSIAPRGIFKGHEDTVE 912
            V+LWS+QDHI           S  S GSI         K+++ PSI PRG++ GHEDTVE
Sbjct: 245  VVLWSIQDHITTSATDAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHEDTVE 304

Query: 911  DVQFCPSSAQEFCSVGDDSCLILWDARTGSNPVIKVEKAHSADVHCVDWNPLDTNLILTG 732
            DV FCPS+AQEFCSVGDDSCLILWDARTGS+P +KVEKAH+AD+HCVDWNP D NLI+TG
Sbjct: 305  DVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNLIITG 364

Query: 731  SADHSVCMFDRRN-----IGSPVHKFEDHKAAVLCVQWCPDKSSVFGSSAEDGFLNIWDY 567
            SAD+S+ +FDRRN     +GSP++KFE HKAAVLCVQW PDKSSVFGSSAEDG LNIWDY
Sbjct: 365  SADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDY 424

Query: 566  ERIGK-----TSVPNCPPGLFFKHAGHRDKVVDFHWNASDPWXXXXXXXXXXXXXXXXTL 402
            +++GK     T  P  PPGLFF+HAGHRDKVVDFHWNA+DPW                TL
Sbjct: 425  DKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGGGGTL 484

Query: 401  QIWRMSDMIYRPEEEVITELEQYKAHVVECTSK 303
            QIWRMSD+IYRPEEEV+ ELE++K+HV+EC +K
Sbjct: 485  QIWRMSDLIYRPEEEVLAELEKFKSHVIECAAK 517


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