BLASTX nr result

ID: Bupleurum21_contig00002198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002198
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519002.1| phosphoribulose kinase, putative [Ricinus co...    75   5e-12
ref|XP_002303455.1| predicted protein [Populus trichocarpa] gi|2...    72   6e-11
ref|XP_002326572.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
ref|XP_003612664.1| Phosphoribulokinase [Medicago truncatula] gi...    65   7e-09
gb|ACJ84919.1| unknown [Medicago truncatula]                           65   7e-09

>ref|XP_002519002.1| phosphoribulose kinase, putative [Ricinus communis]
           gi|223541989|gb|EEF43535.1| phosphoribulose kinase,
           putative [Ricinus communis]
          Length = 403

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 37/57 (64%), Positives = 44/57 (77%)
 Frame = -2

Query: 173 MAVCTVYNVQSLNSSYSISTPSKNHLGFHQKQVFFYSTGSKKTNNRRTDSTEITCAA 3
           MA+CTVY  QSLNS+ SISTP K HLGF+QKQV FY   SK+TN R T ++ ITC+A
Sbjct: 1   MAICTVYTTQSLNSTCSISTPGKTHLGFNQKQVVFY---SKRTNKRATSTSVITCSA 54


>ref|XP_002303455.1| predicted protein [Populus trichocarpa] gi|222840887|gb|EEE78434.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 72.0 bits (175), Expect = 6e-11
 Identities = 36/57 (63%), Positives = 42/57 (73%)
 Frame = -2

Query: 173 MAVCTVYNVQSLNSSYSISTPSKNHLGFHQKQVFFYSTGSKKTNNRRTDSTEITCAA 3
           MAVCTVY  QSLNS+ SISTP+K HLGF+Q+ V FYST  K T  +R  S  ITC+A
Sbjct: 1   MAVCTVYTTQSLNSTCSISTPTKTHLGFNQRHVVFYSTNKKTT--KRASSAVITCSA 55


>ref|XP_002326572.1| predicted protein [Populus trichocarpa] gi|222833894|gb|EEE72371.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/57 (59%), Positives = 41/57 (71%)
 Frame = -2

Query: 173 MAVCTVYNVQSLNSSYSISTPSKNHLGFHQKQVFFYSTGSKKTNNRRTDSTEITCAA 3
           MAVCTVY  QSLNS+ SISTP+K  LGF+QK + FYS  S K  ++R  S  ITC+A
Sbjct: 1   MAVCTVYTTQSLNSTCSISTPTKTRLGFNQKHLVFYS--SNKKTSKRASSAVITCSA 55


>ref|XP_003612664.1| Phosphoribulokinase [Medicago truncatula]
           gi|355513999|gb|AES95622.1| Phosphoribulokinase
           [Medicago truncatula]
          Length = 411

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
 Frame = -2

Query: 173 MAVCTVYNVQSLNSSYSISTPSKNHLGFHQKQVFFYSTGSKKTNNRRTDSTE----ITCA 6
           MA CTVY+ Q L ++ SI T SK H+GF+QKQV FY+T +KK++NRRT+S      ITC 
Sbjct: 1   MAACTVYSTQPLRTNISIPTSSKTHVGFNQKQVVFYTT-TKKSSNRRTNSNNRRYLITCG 59

Query: 5   A 3
           A
Sbjct: 60  A 60


>gb|ACJ84919.1| unknown [Medicago truncatula]
          Length = 411

 Score = 65.1 bits (157), Expect = 7e-09
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 4/61 (6%)
 Frame = -2

Query: 173 MAVCTVYNVQSLNSSYSISTPSKNHLGFHQKQVFFYSTGSKKTNNRRTDSTE----ITCA 6
           MA CTVY+ Q L ++ SI T SK H+GF+QKQV FY+T +KK++NRRT+S      ITC 
Sbjct: 1   MAACTVYSTQPLRTNISIPTSSKTHVGFNQKQVVFYTT-TKKSSNRRTNSNNRRYLITCG 59

Query: 5   A 3
           A
Sbjct: 60  A 60


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