BLASTX nr result

ID: Bupleurum21_contig00002179 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002179
         (621 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36879.3| unnamed protein product [Vitis vinifera]              347   1e-93
emb|CBI22977.3| unnamed protein product [Vitis vinifera]              345   4e-93
ref|XP_002271179.1| PREDICTED: 60S ribosomal protein L18-2-like ...   345   4e-93
ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259...   343   2e-92
emb|CBI39539.3| unnamed protein product [Vitis vinifera]              343   2e-92

>emb|CBI36879.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score =  347 bits (889), Expect = 1e-93
 Identities = 168/188 (89%), Positives = 184/188 (97%)
 Frame = +1

Query: 4   AMGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNK 183
           AMGIDL+AGGKSKRTKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NK
Sbjct: 110 AMGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNK 169

Query: 184 PPISLSRLIRFMTGKEDKIAVIVGTVTDDLRVHDIPCMKVTALRFTETARARIEKAGGEC 363
           PP+SLSRL+R+M GKE KIAV+VGTVTDDLRV+++PC+KVTALRFTE ARARIEKAGGEC
Sbjct: 170 PPLSLSRLVRYMDGKEGKIAVVVGTVTDDLRVYEVPCLKVTALRFTERARARIEKAGGEC 229

Query: 364 LTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGK 543
           LTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARG+
Sbjct: 230 LTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGR 289

Query: 544 RNSKGFRV 567
           RNS+GFRV
Sbjct: 290 RNSRGFRV 297


>emb|CBI22977.3| unnamed protein product [Vitis vinifera]
          Length = 254

 Score =  345 bits (885), Expect = 4e-93
 Identities = 169/189 (89%), Positives = 185/189 (97%)
 Frame = +1

Query: 1   AAMGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTN 180
           AAMGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK N
Sbjct: 66  AAMGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKIN 125

Query: 181 KPPISLSRLIRFMTGKEDKIAVIVGTVTDDLRVHDIPCMKVTALRFTETARARIEKAGGE 360
           KPP+SLSRLIR+M GKEDKIAV+VGTVTDDLRV+++P +KVTALRFTE ARARIEKAGGE
Sbjct: 126 KPPMSLSRLIRYMQGKEDKIAVLVGTVTDDLRVYEVPTLKVTALRFTERARARIEKAGGE 185

Query: 361 CLTFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARG 540
           CLTFDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARG
Sbjct: 186 CLTFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARG 245

Query: 541 KRNSKGFRV 567
           +RNS+GFRV
Sbjct: 246 RRNSRGFRV 254


>ref|XP_002271179.1| PREDICTED: 60S ribosomal protein L18-2-like [Vitis vinifera]
          Length = 187

 Score =  345 bits (885), Expect = 4e-93
 Identities = 167/187 (89%), Positives = 183/187 (97%)
 Frame = +1

Query: 7   MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 186
           MGIDL+AGGKSKRTKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 1   MGIDLVAGGKSKRTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 60

Query: 187 PISLSRLIRFMTGKEDKIAVIVGTVTDDLRVHDIPCMKVTALRFTETARARIEKAGGECL 366
           P+SLSRL+R+M GKE KIAV+VGTVTDDLRV+++PC+KVTALRFTE ARARIEKAGGECL
Sbjct: 61  PLSLSRLVRYMDGKEGKIAVVVGTVTDDLRVYEVPCLKVTALRFTERARARIEKAGGECL 120

Query: 367 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGKR 546
           TFDQLALRAPLGQNTVLLRGPKN+REAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARG+R
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNAREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 180

Query: 547 NSKGFRV 567
           NS+GFRV
Sbjct: 181 NSRGFRV 187


>ref|XP_002283392.2| PREDICTED: uncharacterized protein LOC100259659 [Vitis vinifera]
          Length = 429

 Score =  343 bits (879), Expect = 2e-92
 Identities = 166/187 (88%), Positives = 183/187 (97%)
 Frame = +1

Query: 7   MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 186
           MGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 243 MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 302

Query: 187 PISLSRLIRFMTGKEDKIAVIVGTVTDDLRVHDIPCMKVTALRFTETARARIEKAGGECL 366
           P+SLSRL+R+M GKE KIAV+VGTVTDD+RV+++P +KVTALRFTETARARIEKAGGECL
Sbjct: 303 PLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 362

Query: 367 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGKR 546
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARG+R
Sbjct: 363 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 422

Query: 547 NSKGFRV 567
           NS+GFRV
Sbjct: 423 NSRGFRV 429


>emb|CBI39539.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  343 bits (879), Expect = 2e-92
 Identities = 166/187 (88%), Positives = 183/187 (97%)
 Frame = +1

Query: 7   MGIDLIAGGKSKRTKRTAPRSDDIYLKLIVKLYRFLVRRTGSKFNAVILKRLFMSKTNKP 186
           MGIDL+AGGKSK+TKRTAP+SDDIYLKL+VKLYRFLVRRTGSKFNAVILKRLFMSK NKP
Sbjct: 63  MGIDLVAGGKSKKTKRTAPKSDDIYLKLLVKLYRFLVRRTGSKFNAVILKRLFMSKVNKP 122

Query: 187 PISLSRLIRFMTGKEDKIAVIVGTVTDDLRVHDIPCMKVTALRFTETARARIEKAGGECL 366
           P+SLSRL+R+M GKE KIAV+VGTVTDD+RV+++P +KVTALRFTETARARIEKAGGECL
Sbjct: 123 PLSLSRLVRYMGGKEGKIAVVVGTVTDDIRVYEVPALKVTALRFTETARARIEKAGGECL 182

Query: 367 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHSKPYVRSKGRKFEKARGKR 546
           TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSH+KPYVRSKGRKFE+ARG+R
Sbjct: 183 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGKAPGVPHSHTKPYVRSKGRKFERARGRR 242

Query: 547 NSKGFRV 567
           NS+GFRV
Sbjct: 243 NSRGFRV 249


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