BLASTX nr result

ID: Bupleurum21_contig00002175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002175
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631263.1| PREDICTED: LOW QUALITY PROTEIN: probable nuc...    79   5e-13
emb|CBI28541.3| unnamed protein product [Vitis vinifera]               79   5e-13
emb|CAN77321.1| hypothetical protein VITISV_008818 [Vitis vinifera]    79   5e-13
ref|XP_003532006.1| PREDICTED: probable nucleoredoxin 1-like [Gl...    76   2e-12
gb|AAU04765.1| protein disulfide isomerase (PDI)-like protein 1 ...    76   3e-12

>ref|XP_003631263.1| PREDICTED: LOW QUALITY PROTEIN: probable nucleoredoxin 1-like
           [Vitis vinifera]
          Length = 733

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  TPKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCM 190
           TP + ++YE+L AK ++FEIV+I   D         E SF+K F +MPWLA+PFRD  C 
Sbjct: 219 TPTLVDVYEKLRAKGESFEIVMISLDDE--------EESFKKYFGSMPWLALPFRDKSCE 270

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFT 340
           KL R  E       L   PTLV+IGP G        + +   G+ AYPFT
Sbjct: 271 KLARYFE-------LSALPTLVVIGPDGKTLHSNVAEAIQEHGIQAYPFT 313



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/113 (36%), Positives = 58/113 (51%)
 Frame = +2

Query: 14  TPKIQEIYEELAKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           TPK+ E Y EL+ N +FEI+ +   +         + SF   FS MPWLAIPF D     
Sbjct: 59  TPKLVEAYNELSSNDDFEIIFVSGDND--------DESFNGYFSKMPWLAIPFSDSDAR- 109

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
            D++ E    L  +   P LV++   G      G+DI+  +GV AYPFT + +
Sbjct: 110 -DQLNE----LFKVMGIPNLVMLDESGKVLSEDGVDIIQEYGVEAYPFTPEKI 157



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = +2

Query: 17  PKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           PK+ E Y+++  K++ FE++ I +           + SF + FS MPWLA+PF D R   
Sbjct: 380 PKLIEAYQKIKTKDEAFEVIFISSDKD--------QTSFDEFFSGMPWLALPFGDKRKAS 431

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
           L R  +       +   P+L+ IGP G        ++++  G  AYPFT + +
Sbjct: 432 LSRTFK-------VHGIPSLIAIGPTGRTVTTEARNLVMIHGADAYPFTEEHI 477



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = +2

Query: 17  PKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           PK+ E Y+++  K++ FE++ I +           + SF + FS MPWLA+PF D R   
Sbjct: 541 PKLIEAYQKIKTKDEAFEVIFISSDKD--------QTSFDEFFSGMPWLALPFGDKRKAS 592

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
           L R  +       +   P+L+ IGP G        ++++  G  AYPFT + +
Sbjct: 593 LSRTFK-------VHGIPSLIAIGPTGRTVTTEARNLVMIHGADAYPFTEEHI 638


>emb|CBI28541.3| unnamed protein product [Vitis vinifera]
          Length = 490

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  TPKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCM 190
           TP + ++YE+L AK ++FEIV+I   D         E SF+K F +MPWLA+PFRD  C 
Sbjct: 219 TPTLVDVYEKLRAKGESFEIVMISLDDE--------EESFKKYFGSMPWLALPFRDKSCE 270

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFT 340
           KL R  E       L   PTLV+IGP G        + +   G+ AYPFT
Sbjct: 271 KLARYFE-------LSALPTLVVIGPDGKTLHSNVAEAIQEHGIQAYPFT 313



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/113 (36%), Positives = 58/113 (51%)
 Frame = +2

Query: 14  TPKIQEIYEELAKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           TPK+ E Y EL+ N +FEI+ +   +         + SF   FS MPWLAIPF D     
Sbjct: 59  TPKLVEAYNELSSNDDFEIIFVSGDND--------DESFNGYFSKMPWLAIPFSDSDAR- 109

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
            D++ E    L  +   P LV++   G      G+DI+  +GV AYPFT + +
Sbjct: 110 -DQLNE----LFKVMGIPNLVMLDESGKVLSEDGVDIIQEYGVEAYPFTPEKI 157



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = +2

Query: 17  PKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           PK+ E Y+++  K++ FE++ I +           + SF + FS MPWLA+PF D R   
Sbjct: 380 PKLIEAYQKIKTKDEAFEVIFISSDKD--------QTSFDEFFSGMPWLALPFGDKRKAS 431

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
           L R  +       +   P+L+ IGP G        ++++  G  AYPFT + +
Sbjct: 432 LSRTFK-------VHGIPSLIAIGPTGRTVTTEARNLVMIHGADAYPFTEEHI 477


>emb|CAN77321.1| hypothetical protein VITISV_008818 [Vitis vinifera]
          Length = 572

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 47/110 (42%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  TPKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCM 190
           TP + ++YE+L AK ++FEIV+I   D         E SF+K F +MPWLA+PFRD  C 
Sbjct: 219 TPTLVDVYEKLRAKGESFEIVMISLDDE--------EESFKKYFGSMPWLALPFRDKSCE 270

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFT 340
           KL R  E       L   PTLV+IGP G        + +   G+ AYPFT
Sbjct: 271 KLARYFE-------LSALPTLVVIGPDGKTLHSNVAEAIQEHGIQAYPFT 313



 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 41/113 (36%), Positives = 58/113 (51%)
 Frame = +2

Query: 14  TPKIQEIYEELAKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           TPK+ E Y EL+ N +FEI+ +   +         + SF   FS MPWLAIPF D     
Sbjct: 59  TPKLVEAYNELSSNDDFEIIFVSGDND--------DESFNGYFSKMPWLAIPFSDSDAR- 109

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
            D++ E    L  +   P LV++   G      G+DI+  +GV AYPFT + +
Sbjct: 110 -DQLNE----LFKVMGIPNLVMLDESGKVLSEDGVDIIQEYGVEAYPFTPEKI 157



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
 Frame = +2

Query: 17  PKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCMK 193
           PK+ E Y+++  K++ FE++ I +           + SF + FS MPWLA+PF D R   
Sbjct: 380 PKLIEAYQKIKTKDEAFEVIFISSDKD--------QTSFDEFFSGMPWLALPFGDKRKAS 431

Query: 194 LDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
           L R  +       +   P+L+ IGP G        ++++  G  AYPFT + +
Sbjct: 432 LSRTFK-------VHGIPSLIAIGPTGRTVTTEARNLVMIHGADAYPFTEEHI 477


>ref|XP_003532006.1| PREDICTED: probable nucleoredoxin 1-like [Glycine max]
          Length = 570

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  TPKIQEIYEEL-AKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCM 190
           TPK+ E+YE+L A+ +NFE+VLI   D         E SF++   ++PWL++PF+D  C 
Sbjct: 217 TPKLVEVYEKLKAQGENFEVVLIPLDDD--------EESFKELLESVPWLSLPFKDKICG 268

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFT 340
           KL R  E       L   PTLVIIGP G        + + + GVAAYPFT
Sbjct: 269 KLARYFE-------LSTLPTLVIIGPDGKTLHSNVAEAIEDHGVAAYPFT 311



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  TPKIQEIYEELAKNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRC-M 190
           TP + ++Y E+AK  +F+IV I A +         + SF   FS MPWLAIPF D     
Sbjct: 57  TPTLVDVYNEVAKKGDFQIVFITADED--------DESFNGYFSKMPWLAIPFSDSDTRS 108

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFT 340
           +LD        L  +   P L ++   GN     G+D++  +GV  YPFT
Sbjct: 109 RLDE-------LFHVRGIPHLALLDEAGNVVTEDGVDVIREYGVEGYPFT 151


>gb|AAU04765.1| protein disulfide isomerase (PDI)-like protein 1 [Cucumis melo]
          Length = 341

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
 Frame = +2

Query: 14  TPKIQEIYEELAKNK-NFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCM 190
           TPK+ E Y +L K + NFEIV I   +         E  F++ F TMPWLA+PF+D RC 
Sbjct: 218 TPKLIEAYNKLKKKEENFEIVFISLDEEE------DENLFKEAFKTMPWLALPFKDERCQ 271

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFTRKSV 352
           +L    E  H+       P LVIIG  G  S    ++++   G+ AYPFT K++
Sbjct: 272 ELKLYFEVTHI-------PALVIIGQDGKTSNPNAVELIKGHGIDAYPFTPKNL 318



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 42/110 (38%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
 Frame = +2

Query: 14  TPKIQEIYEELA-KNKNFEIVLIYAHDTPLAFHYTTEVSFQKRFSTMPWLAIPFRDPRCM 190
           TPK+ ++Y+ELA +N +FE+V I +           E SF+  F  MPWL+IPF D    
Sbjct: 55  TPKLAKVYKELASENNDFEVVFISSDGD--------EYSFEAYFLRMPWLSIPFEDSETK 106

Query: 191 KLDRILEDPHMLIDLGPDPTLVIIGPHGNFSERFGMDILLNFGVAAYPFT 340
              +       L  L   P LV+I  +G  S   G+D++ +FGV AYPFT
Sbjct: 107 TKLK------SLFQLSGIPHLVVIDGNGKVSSDDGVDLVRDFGVDAYPFT 150


Top