BLASTX nr result

ID: Bupleurum21_contig00002167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002167
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|2...   178   5e-43
ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplast...   176   2e-42
ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplast...   175   3e-42
gb|ABH07510.1| chloroplast translation elongation factor [Nicoti...   174   5e-42

>ref|XP_002298064.1| predicted protein [Populus trichocarpa] gi|222845322|gb|EEE82869.1|
           predicted protein [Populus trichocarpa]
          Length = 483

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/111 (78%), Positives = 93/111 (83%)
 Frame = +3

Query: 3   DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDXXXXXXXXXXXXXXXSKYEFPGDDIP 182
           DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDD               S YEFPGDDIP
Sbjct: 184 DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIP 243

Query: 183 IVAGSALLALEALMENPAIKRGENEWVDKIYGLMDKVDDYIPIPKRQTELP 335
           I++GSALLALEALMENPAIKRGEN+WVDKIY LMD VD+YIPIP+RQT+LP
Sbjct: 244 IISGSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDLP 294


>ref|XP_002304468.1| predicted protein [Populus trichocarpa] gi|222841900|gb|EEE79447.1|
           predicted protein [Populus trichocarpa]
          Length = 425

 Score =  178 bits (451), Expect = 5e-43
 Identities = 87/111 (78%), Positives = 93/111 (83%)
 Frame = +3

Query: 3   DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDXXXXXXXXXXXXXXXSKYEFPGDDIP 182
           DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDD               S YEFPGDDIP
Sbjct: 126 DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIP 185

Query: 183 IVAGSALLALEALMENPAIKRGENEWVDKIYGLMDKVDDYIPIPKRQTELP 335
           I++GSALLALEALMENPAIKRGEN+WVDKIY LMD VD+YIPIP+RQT+LP
Sbjct: 186 IISGSALLALEALMENPAIKRGENQWVDKIYELMDNVDNYIPIPQRQTDLP 236


>ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
          Length = 479

 Score =  176 bits (445), Expect = 2e-42
 Identities = 85/111 (76%), Positives = 93/111 (83%)
 Frame = +3

Query: 3   DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDXXXXXXXXXXXXXXXSKYEFPGDDIP 182
           DGPMPQTKEHILLAKQVGVPN+VVFLNKQDQVDD               SKYEFPGDD+P
Sbjct: 180 DGPMPQTKEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGDDVP 239

Query: 183 IVAGSALLALEALMENPAIKRGENEWVDKIYGLMDKVDDYIPIPKRQTELP 335
           I++GSALL+LEALM NPAIKRGEN+WVDKIY LM+ VDDYIPIP+RQTELP
Sbjct: 240 IISGSALLSLEALMANPAIKRGENQWVDKIYELMEAVDDYIPIPQRQTELP 290


>ref|XP_003523105.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
          Length = 480

 Score =  175 bits (444), Expect = 3e-42
 Identities = 86/111 (77%), Positives = 92/111 (82%)
 Frame = +3

Query: 3   DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDXXXXXXXXXXXXXXXSKYEFPGDDIP 182
           DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDD               + YEFPGDD P
Sbjct: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRDLLTSYEFPGDDTP 240

Query: 183 IVAGSALLALEALMENPAIKRGENEWVDKIYGLMDKVDDYIPIPKRQTELP 335
           IV+GSALLALEALM NPAIKRG+NEWVDKIY LMD+VDDYIPIP+RQT+LP
Sbjct: 241 IVSGSALLALEALMANPAIKRGDNEWVDKIYKLMDEVDDYIPIPQRQTDLP 291


>gb|ABH07510.1| chloroplast translation elongation factor [Nicotiana attenuata]
          Length = 311

 Score =  174 bits (442), Expect = 5e-42
 Identities = 85/111 (76%), Positives = 92/111 (82%)
 Frame = +3

Query: 3   DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDXXXXXXXXXXXXXXXSKYEFPGDDIP 182
           DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDD               S YEFPGD+IP
Sbjct: 186 DGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDEIP 245

Query: 183 IVAGSALLALEALMENPAIKRGENEWVDKIYGLMDKVDDYIPIPKRQTELP 335
           I++GSALLALEALM NP+IKRGEN+WVDKIY LMD VD+YIPIP+RQTELP
Sbjct: 246 IISGSALLALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELP 296


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