BLASTX nr result
ID: Bupleurum21_contig00002139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00002139
(1022 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [V... 252 2e-79
emb|CBI39676.3| unnamed protein product [Vitis vinifera] 252 5e-79
ref|XP_002512587.1| conserved hypothetical protein [Ricinus comm... 248 9e-75
emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera] 235 1e-73
ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|2... 235 1e-70
>ref|XP_002276198.2| PREDICTED: transcription factor PIF3-like [Vitis vinifera]
Length = 752
Score = 252 bits (643), Expect(2) = 2e-79
Identities = 137/238 (57%), Positives = 158/238 (66%), Gaps = 2/238 (0%)
Frame = -1
Query: 710 DVEEESMGVKKAPPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 531
DVEEES+GV+K+ PA+GG+GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
Sbjct: 438 DVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 497
Query: 530 ASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPTGMQHMHAAHLPHFSPXXXXXXXXX 351
ASMLDEAIEYLKTLQLQVQIMSMG G+ MPPMMLPTGMQH+HAAH+ HF P
Sbjct: 498 ASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP--MGVGMGM 555
Query: 350 XXXXXXXXXMLDMNVGPRGCSMIPMSSMQGAHFPSPPMSASANFQGVAGGNPPVFGHPSK 171
MLDMN G C I MQG HFP P+S N G+ G N VFG P +
Sbjct: 556 GMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQ 615
Query: 170 GFPMSVAGGHLTPVSGQHPANSATGTISLKMGVNVEASNAVPAPTIDS--KNTNLQDM 3
G P+S+ L P+SG S+ ++E ++ PA + +N N Q M
Sbjct: 616 GIPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQNVNSQVM 673
Score = 71.6 bits (174), Expect(2) = 2e-79
Identities = 41/78 (52%), Positives = 49/78 (62%)
Frame = -2
Query: 1018 RSDAVLKEDASNKDKAFIVDRTGNSAKGVPVNEKAGEPVGASSSVCSGNSVERTSNDRRI 839
+S + +E A +K+ +AKG+P EK EP A SSVCSGNSVER SND +
Sbjct: 361 QSPVICQEGACKNEKSSNQVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKH 420
Query: 838 NLKRKPCRDNEESEGQSE 785
NLKRK CRD EESE SE
Sbjct: 421 NLKRK-CRDTEESECPSE 437
>emb|CBI39676.3| unnamed protein product [Vitis vinifera]
Length = 573
Score = 252 bits (643), Expect(2) = 5e-79
Identities = 137/238 (57%), Positives = 158/238 (66%), Gaps = 2/238 (0%)
Frame = -1
Query: 710 DVEEESMGVKKAPPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 531
DVEEES+GV+K+ PA+GG+GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
Sbjct: 302 DVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 361
Query: 530 ASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPTGMQHMHAAHLPHFSPXXXXXXXXX 351
ASMLDEAIEYLKTLQLQVQIMSMG G+ MPPMMLPTGMQH+HAAH+ HF P
Sbjct: 362 ASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP--MGVGMGM 419
Query: 350 XXXXXXXXXMLDMNVGPRGCSMIPMSSMQGAHFPSPPMSASANFQGVAGGNPPVFGHPSK 171
MLDMN G C I MQG HFP P+S N G+ G N VFG P +
Sbjct: 420 GMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLPGQ 479
Query: 170 GFPMSVAGGHLTPVSGQHPANSATGTISLKMGVNVEASNAVPAPTIDS--KNTNLQDM 3
G P+S+ L P+SG S+ ++E ++ PA + +N N Q M
Sbjct: 480 GIPLSMPHAPLIPMSGSPLMKSSMALNDSGAAGSMEVPDSAPASSSKDLIQNVNSQVM 537
Score = 70.1 bits (170), Expect(2) = 5e-79
Identities = 40/74 (54%), Positives = 47/74 (63%)
Frame = -2
Query: 1006 VLKEDASNKDKAFIVDRTGNSAKGVPVNEKAGEPVGASSSVCSGNSVERTSNDRRINLKR 827
+ +E A +K+ +AKG+P EK EP A SSVCSGNSVER SND + NLKR
Sbjct: 229 ICQEGACKNEKSSNQVLGARTAKGIPDGEKTIEPAVACSSVCSGNSVERASNDPKHNLKR 288
Query: 826 KPCRDNEESEGQSE 785
K CRD EESE SE
Sbjct: 289 K-CRDTEESECPSE 301
>ref|XP_002512587.1| conserved hypothetical protein [Ricinus communis]
gi|223548548|gb|EEF50039.1| conserved hypothetical
protein [Ricinus communis]
Length = 758
Score = 248 bits (632), Expect(2) = 9e-75
Identities = 138/231 (59%), Positives = 154/231 (66%)
Frame = -1
Query: 710 DVEEESMGVKKAPPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 531
DVEEES+G KKA PARGG+GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
Sbjct: 441 DVEEESVGGKKAAPARGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 500
Query: 530 ASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPTGMQHMHAAHLPHFSPXXXXXXXXX 351
ASMLDEAIEYLKTLQLQVQIMSMGAG+YMP MMLP G+ HMH AH+ FSP
Sbjct: 501 ASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGVPHMHVAHMSQFSPMGVGMGFGM 560
Query: 350 XXXXXXXXXMLDMNVGPRGCSMIPMSSMQGAHFPSPPMSASANFQGVAGGNPPVFGHPSK 171
DM G GCSMI + M GAHFPSPPMS + G+ G N P+FG S+
Sbjct: 561 GMP--------DMIGGSSGCSMIQVPPMHGAHFPSPPMSGPSALHGMGGSNLPMFGLSSQ 612
Query: 170 GFPMSVAGGHLTPVSGQHPANSATGTISLKMGVNVEASNAVPAPTIDSKNT 18
G PM + P+SG + G + GV N AP SK++
Sbjct: 613 GHPMPYLCPPVMPMSGGPLLRTTLGLNA--GGVAGPTDNLDSAPGSSSKDS 661
Score = 60.1 bits (144), Expect(2) = 9e-75
Identities = 32/55 (58%), Positives = 40/55 (72%)
Frame = -2
Query: 949 NSAKGVPVNEKAGEPVGASSSVCSGNSVERTSNDRRINLKRKPCRDNEESEGQSE 785
++ KG+ EK EP+ ASSSVCSGNS+ER S++ NLKRK R+ EESEG SE
Sbjct: 387 SATKGLADGEKTAEPIVASSSVCSGNSMERVSDEPMQNLKRKH-RETEESEGPSE 440
>emb|CAN76246.1| hypothetical protein VITISV_023382 [Vitis vinifera]
Length = 627
Score = 235 bits (599), Expect(2) = 1e-73
Identities = 122/178 (68%), Positives = 132/178 (74%)
Frame = -1
Query: 710 DVEEESMGVKKAPPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 531
DVEEES+GV+K+ PA+GG+GSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
Sbjct: 423 DVEEESVGVRKSAPAKGGTGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 482
Query: 530 ASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPTGMQHMHAAHLPHFSPXXXXXXXXX 351
ASMLDEAIEYLKTLQLQVQIMSMG G+ MPPMMLPTGMQH+HAAH+ HF P
Sbjct: 483 ASMLDEAIEYLKTLQLQVQIMSMGTGLCMPPMMLPTGMQHIHAAHMGHFPP--MGVGMGM 540
Query: 350 XXXXXXXXXMLDMNVGPRGCSMIPMSSMQGAHFPSPPMSASANFQGVAGGNPPVFGHP 177
MLDMN G C I MQG HFP P+S N G+ G N VFG P
Sbjct: 541 GMGMGYGMGMLDMNGGSPSCPFIQAPPMQGTHFPGRPISVPPNLHGMVGSNLQVFGLP 598
Score = 68.9 bits (167), Expect(2) = 1e-73
Identities = 37/54 (68%), Positives = 41/54 (75%)
Frame = -2
Query: 946 SAKGVPVNEKAGEPVGASSSVCSGNSVERTSNDRRINLKRKPCRDNEESEGQSE 785
+AKG+P EK+ EP A SSVCSGNSVER SND + NLKRK CRD EESE SE
Sbjct: 370 TAKGIPDGEKSIEPAVACSSVCSGNSVERASNDPKHNLKRK-CRDTEESECPSE 422
>ref|XP_002330047.1| predicted protein [Populus trichocarpa] gi|222871472|gb|EEF08603.1|
predicted protein [Populus trichocarpa]
Length = 733
Score = 235 bits (599), Expect(2) = 1e-70
Identities = 124/199 (62%), Positives = 136/199 (68%)
Frame = -1
Query: 710 DVEEESMGVKKAPPARGGSGSKRSRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 531
DVEEES+G KK PAR G+GSKR+RAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK
Sbjct: 433 DVEEESVGAKKQAPARAGNGSKRNRAAEVHNLSERRRRDRINEKMRALQELIPNCNKVDK 492
Query: 530 ASMLDEAIEYLKTLQLQVQIMSMGAGMYMPPMMLPTGMQHMHAAHLPHFSPXXXXXXXXX 351
ASMLDEAIEYLKTLQLQVQIMSMGAG+YMP MMLP GM HMHAAH+ F P
Sbjct: 493 ASMLDEAIEYLKTLQLQVQIMSMGAGLYMPSMMLPPGMPHMHAAHMGQFLPMGVGMGMRM 552
Query: 350 XXXXXXXXXMLDMNVGPRGCSMIPMSSMQGAHFPSPPMSASANFQGVAGGNPPVFGHPSK 171
M D+N G GC M + M G HF PMS + + G N +FG +
Sbjct: 553 GMGMGFGMSMPDVNGGSSGCPMYQVPPMHGPHFSGQPMSGLSALHRMGGSNLQMFGLSGQ 612
Query: 170 GFPMSVAGGHLTPVSGQHP 114
GFPMS L P+SG P
Sbjct: 613 GFPMSFPCAPLVPMSGGPP 631
Score = 58.9 bits (141), Expect(2) = 1e-70
Identities = 39/76 (51%), Positives = 46/76 (60%)
Frame = -2
Query: 1012 DAVLKEDASNKDKAFIVDRTGNSAKGVPVNEKAGEPVGASSSVCSGNSVERTSNDRRINL 833
+A + E S D+ + ++ KGV EK EPV ASSSV S NSVER S+D NL
Sbjct: 358 EATIPEGDSKSDRNCRQNFCESAIKGVADVEKTKEPVVASSSVGSDNSVERASDDPTENL 417
Query: 832 KRKPCRDNEESEGQSE 785
KRK RD EESEG SE
Sbjct: 418 KRKH-RDTEESEGPSE 432