BLASTX nr result

ID: Bupleurum21_contig00002115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002115
         (1209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003611551.1| U-box domain-containing protein [Medicago tr...   257   4e-66
ref|XP_002267145.2| PREDICTED: U-box domain-containing protein 3...   253   9e-65
ref|XP_003517356.1| PREDICTED: U-box domain-containing protein 3...   253   9e-65
ref|NP_566927.1| U-box domain-containing protein 30 [Arabidopsis...   249   1e-63
emb|CAB66919.1| putative protein [Arabidopsis thaliana]               249   1e-63

>ref|XP_003611551.1| U-box domain-containing protein [Medicago truncatula]
           gi|355512886|gb|AES94509.1| U-box domain-containing
           protein [Medicago truncatula]
          Length = 471

 Score =  257 bits (657), Expect = 4e-66
 Identities = 126/166 (75%), Positives = 143/166 (86%), Gaps = 3/166 (1%)
 Frame = -1

Query: 489 MPMYKSTKRDGIFGCDGGAESQVLDLDTAVKDGVLGGVPTGGFCVGDG---KKLDLRKMV 319
           MPMY+ +KRD + G +GG + Q+LDLDTAVKDGVLGGV  GG  VG G   +KLDLRKM+
Sbjct: 1   MPMYQPSKRDMVVGYEGGGDGQILDLDTAVKDGVLGGVDCGGI-VGTGVVGEKLDLRKMI 59

Query: 318 EELNLPEVPPVFICPISLEPMQDPVTLSTGQTYERSNILKWFSLGHYTCPTTMQELWDDT 139
           +EL L EVP VFICPISLEPMQDPVTL TGQTYER+NILKWF++GH+TCPTTMQELWDD+
Sbjct: 60  QELELCEVPSVFICPISLEPMQDPVTLCTGQTYERNNILKWFNMGHFTCPTTMQELWDDS 119

Query: 138 ITPNTTLYHLIYTWFSQRYLQMKKKSEDVQERASEHLATLKKVKGQ 1
           ITPNTTLY LIYTWFSQ+YL MKK+SEDVQ RASE + TLKKVKGQ
Sbjct: 120 ITPNTTLYRLIYTWFSQKYLLMKKRSEDVQGRASELVETLKKVKGQ 165


>ref|XP_002267145.2| PREDICTED: U-box domain-containing protein 30 [Vitis vinifera]
          Length = 447

 Score =  253 bits (645), Expect = 9e-65
 Identities = 122/163 (74%), Positives = 139/163 (85%)
 Frame = -1

Query: 489 MPMYKSTKRDGIFGCDGGAESQVLDLDTAVKDGVLGGVPTGGFCVGDGKKLDLRKMVEEL 310
           MPM++  ++DG+ G DGG +  VLDLDTAVKDGVLGG   GG   G  +KLDL++M+EEL
Sbjct: 1   MPMFQHYQKDGLVGFDGGGDGHVLDLDTAVKDGVLGG-GGGGVVGGIAEKLDLKRMIEEL 59

Query: 309 NLPEVPPVFICPISLEPMQDPVTLSTGQTYERSNILKWFSLGHYTCPTTMQELWDDTITP 130
           +L E+P VFICPISLEPMQDPVTL TGQTYERSNILKWFSLGH TCPTTMQELWDD++TP
Sbjct: 60  DLSEIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFSLGHLTCPTTMQELWDDSVTP 119

Query: 129 NTTLYHLIYTWFSQRYLQMKKKSEDVQERASEHLATLKKVKGQ 1
           N TLYHLIY+WFSQ+YL MKK+SEDVQ RASE L TLKKVKGQ
Sbjct: 120 NKTLYHLIYSWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQ 162


>ref|XP_003517356.1| PREDICTED: U-box domain-containing protein 30-like [Glycine max]
          Length = 449

 Score =  253 bits (645), Expect = 9e-65
 Identities = 121/163 (74%), Positives = 140/163 (85%)
 Frame = -1

Query: 489 MPMYKSTKRDGIFGCDGGAESQVLDLDTAVKDGVLGGVPTGGFCVGDGKKLDLRKMVEEL 310
           MPM++  ++D + G +GGA+ Q+LDLDTAVKDGVLGGV  G    G G+K+DL KM+EEL
Sbjct: 1   MPMFQPCRKDMVTGYEGGADGQILDLDTAVKDGVLGGVEGGVVGGGVGEKVDLGKMIEEL 60

Query: 309 NLPEVPPVFICPISLEPMQDPVTLSTGQTYERSNILKWFSLGHYTCPTTMQELWDDTITP 130
            L EVP VFICPISLEPMQDP+TL TGQTYERSNILKWF+LGH+TCPTTMQELWDD++TP
Sbjct: 61  ELCEVPSVFICPISLEPMQDPITLCTGQTYERSNILKWFNLGHFTCPTTMQELWDDSVTP 120

Query: 129 NTTLYHLIYTWFSQRYLQMKKKSEDVQERASEHLATLKKVKGQ 1
           NTTLY LI+TWFSQ+YL MKK+SEDVQ RASE L TLKKVKGQ
Sbjct: 121 NTTLYRLIHTWFSQKYLLMKKRSEDVQGRASELLETLKKVKGQ 163


>ref|NP_566927.1| U-box domain-containing protein 30 [Arabidopsis thaliana]
           gi|122163922|sp|Q058P4.1|PUB30_ARATH RecName: Full=U-box
           domain-containing protein 30; AltName: Full=Plant U-box
           protein 30 gi|115646761|gb|ABJ17109.1| At3g49810
           [Arabidopsis thaliana] gi|332645072|gb|AEE78593.1| U-box
           domain-containing protein 30 [Arabidopsis thaliana]
          Length = 448

 Score =  249 bits (635), Expect = 1e-63
 Identities = 120/163 (73%), Positives = 138/163 (84%)
 Frame = -1

Query: 489 MPMYKSTKRDGIFGCDGGAESQVLDLDTAVKDGVLGGVPTGGFCVGDGKKLDLRKMVEEL 310
           MPM++  KRDG+ G +GG + QVLDLDTAVKDGVLGGV  GG  V D +KLDL+KM++EL
Sbjct: 1   MPMFQPLKRDGLIGFEGGGDGQVLDLDTAVKDGVLGGVNGGGVGVVD-EKLDLKKMIKEL 59

Query: 309 NLPEVPPVFICPISLEPMQDPVTLSTGQTYERSNILKWFSLGHYTCPTTMQELWDDTITP 130
           +L ++P VFICPISLEPMQDPVTL TGQTYER NI KWF+LGH TCPTTMQELWDDT+TP
Sbjct: 60  DLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP 119

Query: 129 NTTLYHLIYTWFSQRYLQMKKKSEDVQERASEHLATLKKVKGQ 1
           N TL+HLIYTWFSQ+Y+ MKK+SEDVQ RA E L TLKK KGQ
Sbjct: 120 NKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQ 162


>emb|CAB66919.1| putative protein [Arabidopsis thaliana]
          Length = 480

 Score =  249 bits (635), Expect = 1e-63
 Identities = 120/163 (73%), Positives = 138/163 (84%)
 Frame = -1

Query: 489 MPMYKSTKRDGIFGCDGGAESQVLDLDTAVKDGVLGGVPTGGFCVGDGKKLDLRKMVEEL 310
           MPM++  KRDG+ G +GG + QVLDLDTAVKDGVLGGV  GG  V D +KLDL+KM++EL
Sbjct: 1   MPMFQPLKRDGLIGFEGGGDGQVLDLDTAVKDGVLGGVNGGGVGVVD-EKLDLKKMIKEL 59

Query: 309 NLPEVPPVFICPISLEPMQDPVTLSTGQTYERSNILKWFSLGHYTCPTTMQELWDDTITP 130
           +L ++P VFICPISLEPMQDPVTL TGQTYER NI KWF+LGH TCPTTMQELWDDT+TP
Sbjct: 60  DLQDIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTP 119

Query: 129 NTTLYHLIYTWFSQRYLQMKKKSEDVQERASEHLATLKKVKGQ 1
           N TL+HLIYTWFSQ+Y+ MKK+SEDVQ RA E L TLKK KGQ
Sbjct: 120 NKTLHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQ 162


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