BLASTX nr result

ID: Bupleurum21_contig00002085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002085
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]      147   4e-33
emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]   147   4e-33
gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]             131   2e-28
gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]         117   2e-24
dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]        116   5e-24

>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score =  147 bits (370), Expect = 4e-33
 Identities = 90/279 (32%), Positives = 144/279 (51%), Gaps = 7/279 (2%)
 Frame = +1

Query: 1   VKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSIGTLTSHAISSEGNNLISGCSMQTSTNI 180
           VKG+P GQAIDIEI                T +   T  A + +G  L S  S      I
Sbjct: 78  VKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPTLQAGTKDGKLLASVSSSHPGKQI 137

Query: 181 LDLDKEATREKQSVNKELEFAKKVQNQNDCADTLSIFQEAPSAPLCPERRNNVSKSTSTG 360
           LDL+K+   E+ S +++     + Q++++C++  ++FQEAP   +    +N++       
Sbjct: 138 LDLEKDPLPERPSGDEKPGNENENQDEDNCSEVFTLFQEAPCTSMSSANKNSIPTPVPLR 197

Query: 361 NY-KFKKFATNLKEVLDQDTASESCLTFKAGGGQKNKEHNAKQLVGDLHSFNCAKLGNYH 537
           N   F++F   +KE  +QD  +ES +T +  G QK  + + +Q   D      + L N H
Sbjct: 198 NSCTFREFVPLMKEGSNQDETNESYITVEPKGNQKLDKPDFRQKAQDSGMSKASNLENSH 257

Query: 538 SSHDKLLCKDKENEPKPPATFGLS-SSDMNVDVSNPRHVPIHIVNGSPGMSTNTVALDFS 714
            SH+KL+  +K +EP     FG    ++M    + PRHVP+H+++GS G  T   + + +
Sbjct: 258 PSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVHVLDGSLGTCTQAPSSEMT 317

Query: 715 SAESLYHQTKVVG-----ENVAAASTTEHQSNALQSSIH 816
             ESL HQ  + G     +N AA++ TEHQ+N  +SSIH
Sbjct: 318 YGESLVHQIGIHGHPNLFQNPAASAATEHQNNGSRSSIH 356


>emb|CAN81352.1| hypothetical protein VITISV_012722 [Vitis vinifera]
          Length = 857

 Score =  147 bits (370), Expect = 4e-33
 Identities = 90/279 (32%), Positives = 144/279 (51%), Gaps = 7/279 (2%)
 Frame = +1

Query: 1    VKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSIGTLTSHAISSEGNNLISGCSMQTSTNI 180
            VKG+P GQAIDIEI                T +   T  A + +G  L S  S      I
Sbjct: 164  VKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGVAAPTLQAGTKDGKLLASVSSXHPGKQI 223

Query: 181  LDLDKEATREKQSVNKELEFAKKVQNQNDCADTLSIFQEAPSAPLCPERRNNVSKSTSTG 360
            LDL+K+   E+ S +++     + Q++++C++  ++FQEAP   +    +N++       
Sbjct: 224  LDLEKDPLPERPSGDEKPGNENENQDEDNCSEVFTLFQEAPCTSMSSANKNSIPTPVPLR 283

Query: 361  NY-KFKKFATNLKEVLDQDTASESCLTFKAGGGQKNKEHNAKQLVGDLHSFNCAKLGNYH 537
            N   F++F   +KE  +QD  +ES +T +  G QK  + + +Q   D      + L N H
Sbjct: 284  NSCTFREFVPLMKEGSNQDETNESYITVEPKGNQKLDKPDFRQKAQDSGMSKASNLENSH 343

Query: 538  SSHDKLLCKDKENEPKPPATFGLS-SSDMNVDVSNPRHVPIHIVNGSPGMSTNTVALDFS 714
             SH+KL+  +K +EP     FG    ++M    + PRHVP+H+++GS G  T   + + +
Sbjct: 344  PSHEKLVQAEKTDEPSQSENFGSQPKNEMQAAQNFPRHVPVHVLDGSLGTCTQAPSSEMT 403

Query: 715  SAESLYHQTKVVG-----ENVAAASTTEHQSNALQSSIH 816
              ESL HQ  + G     +N AA++ TEHQ+N  +SSIH
Sbjct: 404  YGESLVHQIGIHGHPNLFQNPAASAATEHQNNGSRSSIH 442


>gb|AAU20773.1| late elongated hypocotyl [Castanea sativa]
          Length = 768

 Score =  131 bits (330), Expect = 2e-28
 Identities = 88/276 (31%), Positives = 141/276 (51%), Gaps = 7/276 (2%)
 Frame = +1

Query: 1   VKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSIGTLTSHAISSEGNNLISGCSMQTSTNI 180
           VKG+P GQA+DI+I                TSIG  TS   + +G  L +  S       
Sbjct: 78  VKGVPIGQALDIDIPPPRPKRKPSNPYPRKTSIGVPTSQVGTKDGK-LFTSASSSDCKQA 136

Query: 181 LDLDKEATREKQSVNKELEFAKKVQNQNDCADTLSIFQEAPSAPLCPERRNNVSKSTSTG 360
           LDL+KE   EK + +++ E AK  Q+ N C++  ++ QE   + +    R++V    +  
Sbjct: 137 LDLEKEPLPEKPNGDEKPENAKDNQDDN-CSEVFTLHQEVHCSSVSSANRSSVPTPVALR 195

Query: 361 NYK-FKKFATNLKEVLDQDTASESCLTFKAGGGQKNKEHNAKQLVGDLHSFNCAKLGNYH 537
           N    ++F  ++K  + QD  +ES +T +  G QK ++ +AKQ + D  + N +KLGN++
Sbjct: 196 NLNTLREFVPSMKRSITQDETNESYVTIELKGNQKLEKADAKQTIQDTGTSNGSKLGNHN 255

Query: 538 SSHDKLLCKDKENEPKPPATFGLSSSDMNVDVSNPRHVPIHIVNGSPGMSTNTVALDFSS 717
             H+K +  DK  +        L   +M    + PRHVP+ +V+GS G  T T + D S 
Sbjct: 256 VLHEKPIQGDKTQD----LNCALPMDEMQATQNYPRHVPVQVVDGSLGTCTQTPSSDMSF 311

Query: 718 AESLYHQTKVVGE------NVAAASTTEHQSNALQS 807
            +S++H    V        N AA++TTEHQ+N  +S
Sbjct: 312 QDSIFHPMGEVHRHHNPFTNPAASATTEHQNNVPRS 347


>gb|AFA35964.1| late elongated hypocotyl [Nicotiana attenuata]
          Length = 767

 Score =  117 bits (294), Expect = 2e-24
 Identities = 83/278 (29%), Positives = 133/278 (47%), Gaps = 7/278 (2%)
 Frame = +1

Query: 1   VKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSIGTLTSHAISSEGNNLISGCSMQTSTNI 180
           +KG+P  QA+DIEI                TS+   +S     +G       S+    N+
Sbjct: 78  IKGVPISQALDIEIPPPRPKRKPSNPYPRKTSVAVPSSQVGIKDGKLSTPFSSICEDRNL 137

Query: 181 LDLDKEATREKQSVNKELEFAKKVQNQNDCADTLSIFQEAPSAPLCPERRNNVSKSTSTG 360
            DL+KE   EK   N++L   ++ QN+ +C    ++F+E  SAP     ++  + +   G
Sbjct: 138 FDLEKEPIAEKPGRNEKLGSVQENQNKKNCCQGFTLFKEGASAPSLSLGKSLQTLAEPAG 197

Query: 361 NYKFKKFATNLKEVLDQDTASESCLTFKAGGGQKNKEHNAKQLVGDLHSFNCAKLGNYHS 540
           +    +     K V++ +  ++S LT ++   QK    NAKQ      S N    G    
Sbjct: 198 SCTLNESVPATKGVINHNVTAKSFLTVESKEHQKLDILNAKQSFQSNSSCNTFDGGKSCQ 257

Query: 541 SHDKLLCKDKENEPKPPATFG-LSSSDMNVDVSNPRHVPIHIVNGSPGMSTNTVALDFSS 717
           S++KL   +K+++P  P  FG  S +DM V  + PRHVP+HI++G+ G++      D   
Sbjct: 258 SNEKLAQDEKKDQPSQPDHFGEFSRNDMQVPHNYPRHVPVHILDGALGVNGAQTTPDMFY 317

Query: 718 AESLYHQTKVVG------ENVAAASTTEHQSNALQSSI 813
            ES+ HQ   V        N  +++T+EH SNA  SSI
Sbjct: 318 PESVSHQIGGVQGLSNLYTNPTSSATSEHHSNAAMSSI 355


>dbj|BAK19069.1| late elongated hypocotyl homolog [Ipomoea nil]
          Length = 776

 Score =  116 bits (291), Expect = 5e-24
 Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 6/278 (2%)
 Frame = +1

Query: 1   VKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSIGTLTSHAISSEGNNLISGCSMQTSTNI 180
           +KG+P GQA+DIEI                T  GT T      +G        +  S + 
Sbjct: 78  IKGVPIGQALDIEIPPPRPKRKPINPYPRKTVAGTPTPVVGGKDGK-------LYASDSS 130

Query: 181 LDLDKEATREKQSVNKELEFAKKVQNQNDCADTLSIFQEAPSAPLCPERRNNVSKSTSTG 360
           L   KE   EK   +K+L+ AK+   +   +D L++F E P++P    R    ++     
Sbjct: 131 LCQQKEPLLEKPGGDKKLDIAKE-NREEVISDVLTLFHEGPTSPSVRNRDCLPTQVAPQN 189

Query: 361 NYKFKKFATNLKEVLDQDTASESCLTFKAGGGQKNKEHNAKQLVGDLHSFNCAKLGNYHS 540
           +  F++F   +K   ++D AS+S +T ++ G Q+  + + KQ   D  S N   + N   
Sbjct: 190 SCTFREFVPIVKGT-NRDDASKSYVTVESKGNQEPDKLDTKQSFQDASSCNSLDMENSFP 248

Query: 541 SHDKLLCKDKENEPKPPATFGLSSSDMNVDVSNPRHVPIHIVNGSPGMSTNTVALDFSSA 720
           S +KL   +K +EP  P     + +DM    S PRHVP+HI++GS GM+TN    D +  
Sbjct: 249 SKEKLTHGEKLDEPNQPDEV-FTENDMQAVQSCPRHVPVHILDGSLGMNTNNTQ-DMTYH 306

Query: 721 ESLYHQTKVVGENV------AAASTTEHQSNALQSSIH 816
           ES+ HQ   V  ++      A+++T+EHQSN  +SSIH
Sbjct: 307 ESIVHQIGGVQGHLNQFTHHASSNTSEHQSNPSRSSIH 344


Top