BLASTX nr result

ID: Bupleurum21_contig00002084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002084
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD12767.2| LHY protein [Phaseolus vulgaris]                       99   5e-19
ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max...    96   2e-18
emb|CBI38726.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]       93   2e-17
ref|NP_001235187.1| late elongated hypocotyl and circadian clock...    93   2e-17

>emb|CAD12767.2| LHY protein [Phaseolus vulgaris]
          Length = 723

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 55/103 (53%), Positives = 69/103 (66%)
 Frame = +2

Query: 2   EHIGTKTAVQIRSHAQKFFTKLEKEALVKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSI 181
           EHIGTKTAVQIRSHAQKFFTKLEKEALVKG+P GQA+DI+I                T+I
Sbjct: 51  EHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTTI 110

Query: 182 GTLSSHAISSEGNHLISGCSMQASTNILDLDKEATPEKRSVNK 310
           GT + H+ + +GN + S  + QA    LDL+KE  PEK  +++
Sbjct: 111 GTATLHSGAKDGNLVESSHNNQA----LDLEKEPLPEKYDLDE 149


>ref|NP_001236400.1| MYB transcription factor MYB114 [Glycine max]
           gi|158999370|gb|ABW87009.1| late elongated hypocotyl and
           circadian clock associated-1-like protein 2 [Glycine
           max]
          Length = 748

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 53/102 (51%), Positives = 64/102 (62%)
 Frame = +2

Query: 2   EHIGTKTAVQIRSHAQKFFTKLEKEALVKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSI 181
           EHIGTKTAVQIRSHAQKFFTKLEKEA VKG+P GQA+DI+I                T++
Sbjct: 51  EHIGTKTAVQIRSHAQKFFTKLEKEAFVKGVPIGQALDIDIPPPRPKRKPSNPYPRKTNV 110

Query: 182 GTLSSHAISSEGNHLISGCSMQASTNILDLDKEATPEKRSVN 307
           G  + H+ +  G  LIS  S       LDL+KE  PEK +V+
Sbjct: 111 GAPTLHSEAKHGKSLISIASSHGK-QALDLEKEPLPEKHNVD 151


>emb|CBI38726.3| unnamed protein product [Vitis vinifera]
          Length = 218

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/100 (52%), Positives = 61/100 (61%)
 Frame = +2

Query: 2   EHIGTKTAVQIRSHAQKFFTKLEKEALVKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSI 181
           EHIGTKTAVQIRSHAQKFF+KLEKEALVKG+P GQAIDIEI                T +
Sbjct: 51  EHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGV 110

Query: 182 GTLSSHAISSEGNHLISGCSMQASTNILDLDKEATPEKRS 301
              +  A + +G  L S  S      ILDL+K+  PE+ S
Sbjct: 111 AAPTLQAGTKDGKLLASVSSSHPGKQILDLEKDPLPERPS 150


>ref|XP_002267720.1| PREDICTED: protein LHY-like [Vitis vinifera]
          Length = 771

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/100 (52%), Positives = 61/100 (61%)
 Frame = +2

Query: 2   EHIGTKTAVQIRSHAQKFFTKLEKEALVKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSI 181
           EHIGTKTAVQIRSHAQKFF+KLEKEALVKG+P GQAIDIEI                T +
Sbjct: 51  EHIGTKTAVQIRSHAQKFFSKLEKEALVKGVPIGQAIDIEIPPPRPKRKPSNPYPRKTGV 110

Query: 182 GTLSSHAISSEGNHLISGCSMQASTNILDLDKEATPEKRS 301
              +  A + +G  L S  S      ILDL+K+  PE+ S
Sbjct: 111 AAPTLQAGTKDGKLLASVSSSHPGKQILDLEKDPLPERPS 150


>ref|NP_001235187.1| late elongated hypocotyl and circadian clock associated-1-like
           protein 1 [Glycine max] gi|158999368|gb|ABW87008.1| late
           elongated hypocotyl and circadian clock
           associated-1-like protein 1 [Glycine max]
          Length = 749

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
 Frame = +2

Query: 2   EHIGTKTAVQIRSHAQKFFTKLEKEALVKGLPTGQAIDIEIXXXXXXXXXXXXXXXXTSI 181
           EHIGTKTAVQIRSHAQKFFTKLEKEALVKG+P GQA+DI+I                T I
Sbjct: 51  EHIGTKTAVQIRSHAQKFFTKLEKEALVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTRI 110

Query: 182 GTLSSHAISSEGN-HLISGCSMQASTNILDLDKEATPEKRSVNK 310
           GT S H+ + +G  +L+    +  +   LDL KE  PEK  +++
Sbjct: 111 GTTSLHSGAKDGKLNLVESSHVNQA---LDLKKEPLPEKHDLDE 151


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