BLASTX nr result

ID: Bupleurum21_contig00002075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002075
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004139227.1| PREDICTED: probable ribose-5-phosphate isome...   379   e-103
ref|XP_004156456.1| PREDICTED: LOW QUALITY PROTEIN: probable rib...   377   e-102
ref|XP_002278297.1| PREDICTED: probable ribose-5-phosphate isome...   374   e-101
ref|XP_002328347.1| predicted protein [Populus trichocarpa] gi|2...   366   4e-99
ref|XP_002512223.1| ribose-5-phosphate isomerase, putative [Rici...   365   9e-99

>ref|XP_004139227.1| PREDICTED: probable ribose-5-phosphate isomerase-like [Cucumis
           sativus]
          Length = 283

 Score =  379 bits (972), Expect = e-103
 Identities = 191/235 (81%), Positives = 209/235 (88%), Gaps = 1/235 (0%)
 Frame = +1

Query: 22  TLTQDDLKKLAADKAVDYVRSGMVLGLGTGSTAAFVVSKLGQLISDNKLTDIVGVPTSKR 201
           TLTQDDLKKLAADKAV+YV+SGMVLGLGTGSTAAFVV+K+G+L+  N+LTDIVG+PTSKR
Sbjct: 49  TLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKR 108

Query: 202 TYEQALSLNIPLSTLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDQFVV 381
           T EQA SL IPLS LDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASD+FVV
Sbjct: 109 TEEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVV 168

Query: 382 VVDDSKLVXXXXXXXXAMPVEVVQFCWKYNLIRLQEMFKNEGVEAKLRLNG-EKPYVTDN 558
           VVDD+KLV        AMPVEVVQFCWKYNL+RLQE+FK EG EAKLRL+G EKPYVTDN
Sbjct: 169 VVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDN 228

Query: 559 MNYIVDLYFNTPITDAVGAGKEISALEGVVEHGLFLDMTTAVIIAGSDGVSVKSK 723
            NYIVDLYF TPI D + AGKEIS+ EGVVEHGLFLDM TAVIIAG DG+ +K+K
Sbjct: 229 SNYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGIDIKNK 283


>ref|XP_004156456.1| PREDICTED: LOW QUALITY PROTEIN: probable ribose-5-phosphate
           isomerase-like [Cucumis sativus]
          Length = 283

 Score =  377 bits (967), Expect = e-102
 Identities = 190/235 (80%), Positives = 208/235 (88%), Gaps = 1/235 (0%)
 Frame = +1

Query: 22  TLTQDDLKKLAADKAVDYVRSGMVLGLGTGSTAAFVVSKLGQLISDNKLTDIVGVPTSKR 201
           TLTQDDLKKLAADKAV+YV+SGMVLGLGTGSTAAFVV+K+G+L+  N+LTDIVG+PTSKR
Sbjct: 49  TLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKIGELLKTNQLTDIVGIPTSKR 108

Query: 202 TYEQALSLNIPLSTLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDQFVV 381
           T EQA SL IPLS LDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASD+FVV
Sbjct: 109 TEEQARSLGIPLSVLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKFVV 168

Query: 382 VVDDSKLVXXXXXXXXAMPVEVVQFCWKYNLIRLQEMFKNEGVEAKLRLNG-EKPYVTDN 558
           VVDD+KLV        AMPVEVVQFCWKYNL+RLQE+FK EG EAKLRL+G EKPYVTDN
Sbjct: 169 VVDDTKLVDGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLDGDEKPYVTDN 228

Query: 559 MNYIVDLYFNTPITDAVGAGKEISALEGVVEHGLFLDMTTAVIIAGSDGVSVKSK 723
            NYIVDLYF TPI D + AGKEIS+ EGVVEHGLF DM TAVIIAG DG+ +K+K
Sbjct: 229 SNYIVDLYFKTPIKDGLAAGKEISSFEGVVEHGLFXDMATAVIIAGKDGIDIKNK 283


>ref|XP_002278297.1| PREDICTED: probable ribose-5-phosphate isomerase [Vitis vinifera]
          Length = 283

 Score =  374 bits (960), Expect = e-101
 Identities = 194/242 (80%), Positives = 212/242 (87%), Gaps = 1/242 (0%)
 Frame = +1

Query: 1   AFSSPSPTLTQDDLKKLAADKAVDYVRSGMVLGLGTGSTAAFVVSKLGQLISDNKLTDIV 180
           AFS+P+  LTQDDLKKLAADKAVDYV+SGMVLGLGTGSTAAFVV+KLG L+   +L+DIV
Sbjct: 44  AFSAPA--LTQDDLKKLAADKAVDYVKSGMVLGLGTGSTAAFVVAKLGHLLKTGQLSDIV 101

Query: 181 GVPTSKRTYEQALSLNIPLSTLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEA 360
           GVPTSKRT EQALSL IPLS LD HP +DLAIDGADEVDPDLNLVKGRGGALLREKMVEA
Sbjct: 102 GVPTSKRTEEQALSLGIPLSVLDHHPSIDLAIDGADEVDPDLNLVKGRGGALLREKMVEA 161

Query: 361 ASDQFVVVVDDSKLVXXXXXXXXAMPVEVVQFCWKYNLIRLQEMFKNEGVEAKLRLNGE- 537
           ASD+FVVVVDD+KLV        AMPVEVVQFCWKYNL+RLQE+FK EG EAKLRLN + 
Sbjct: 162 ASDKFVVVVDDTKLVNGLGGSGLAMPVEVVQFCWKYNLVRLQELFKEEGCEAKLRLNPDG 221

Query: 538 KPYVTDNMNYIVDLYFNTPITDAVGAGKEISALEGVVEHGLFLDMTTAVIIAGSDGVSVK 717
           KPYVTDN NYIVDLYF TPI D++ AGKEIS+ EGVVEHGLFLDM TAVIIAG DGV+VK
Sbjct: 222 KPYVTDNSNYIVDLYFKTPIKDSIAAGKEISSFEGVVEHGLFLDMATAVIIAGKDGVTVK 281

Query: 718 SK 723
           +K
Sbjct: 282 TK 283


>ref|XP_002328347.1| predicted protein [Populus trichocarpa] gi|222838062|gb|EEE76427.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  366 bits (939), Expect = 4e-99
 Identities = 188/237 (79%), Positives = 203/237 (85%), Gaps = 1/237 (0%)
 Frame = +1

Query: 16  SPTLTQDDLKKLAADKAVDYVRSGMVLGLGTGSTAAFVVSKLGQLISDNKLTDIVGVPTS 195
           +P LTQDDLKKLAADKAV+YV+SGMVLGLGTGSTAAFVV+KLG+L+   +L DI+GVPTS
Sbjct: 54  APVLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVAKLGELLKTGELKDIIGVPTS 113

Query: 196 KRTYEQALSLNIPLSTLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDQF 375
           KRT EQA SLNIPLS LDDHPH+DLAIDGADEVDP LNLVKGRGGALLREKMVEAASD+F
Sbjct: 114 KRTEEQARSLNIPLSVLDDHPHIDLAIDGADEVDPLLNLVKGRGGALLREKMVEAASDEF 173

Query: 376 VVVVDDSKLVXXXXXXXXAMPVEVVQFCWKYNLIRLQEMFKNEGVEAKLRLNGE-KPYVT 552
           VVV DD+K+V        AMPVEVVQFCWKYNL+RLQEMFK+EGVEAKLR   + KPYVT
Sbjct: 174 VVVADDTKVVDGLGGSKLAMPVEVVQFCWKYNLLRLQEMFKDEGVEAKLRAGEDGKPYVT 233

Query: 553 DNMNYIVDLYFNTPITDAVGAGKEISALEGVVEHGLFLDMTTAVIIAGSDGVSVKSK 723
           DN NYIVDLYF  PI D   AGKEIS LEGVVEHGLFLDM TAVIIAG  GV VKSK
Sbjct: 234 DNFNYIVDLYFENPIKDGYAAGKEISGLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 290


>ref|XP_002512223.1| ribose-5-phosphate isomerase, putative [Ricinus communis]
           gi|223548184|gb|EEF49675.1| ribose-5-phosphate
           isomerase, putative [Ricinus communis]
          Length = 284

 Score =  365 bits (936), Expect = 9e-99
 Identities = 184/237 (77%), Positives = 206/237 (86%), Gaps = 1/237 (0%)
 Frame = +1

Query: 16  SPTLTQDDLKKLAADKAVDYVRSGMVLGLGTGSTAAFVVSKLGQLISDNKLTDIVGVPTS 195
           +P LTQDDLKKLAADKAVDYV+SGM+LGLGTGSTAAFVV+K+G+L+   +L DI+G+PTS
Sbjct: 48  APVLTQDDLKKLAADKAVDYVKSGMILGLGTGSTAAFVVAKIGELLKSGELKDIIGIPTS 107

Query: 196 KRTYEQALSLNIPLSTLDDHPHLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDQF 375
           KRT EQALSL IPLS LD+HP LDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASD+F
Sbjct: 108 KRTEEQALSLGIPLSVLDEHPKLDLAIDGADEVDPDLNLVKGRGGALLREKMVEAASDKF 167

Query: 376 VVVVDDSKLVXXXXXXXXAMPVEVVQFCWKYNLIRLQEMFKNEGVEAKLRLNGE-KPYVT 552
           VVV D++KLV        AMPVEVVQFCWKYNLIRL+E+FK+EGV+AKLRLN + KPYVT
Sbjct: 168 VVVADETKLVDGLGGSKLAMPVEVVQFCWKYNLIRLKELFKDEGVDAKLRLNEDGKPYVT 227

Query: 553 DNMNYIVDLYFNTPITDAVGAGKEISALEGVVEHGLFLDMTTAVIIAGSDGVSVKSK 723
           DN NYIVDLYF  PI D   AGKEIS+LEGVVEHGLFLDM TAVIIAG  G+ VK+K
Sbjct: 228 DNSNYIVDLYFENPIKDGYAAGKEISSLEGVVEHGLFLDMATAVIIAGKTGIDVKTK 284


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