BLASTX nr result

ID: Bupleurum21_contig00002043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002043
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, c...   196   1e-48
ref|XP_002518855.1| structural constituent of ribosome, putative...   194   6e-48
gb|AFK44002.1| unknown [Lotus japonicus]                              191   4e-47
ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycin...   190   1e-46
ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycin...   190   1e-46

>ref|XP_002264340.1| PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Vitis
           vinifera]
          Length = 199

 Score =  196 bits (499), Expect = 1e-48
 Identities = 95/100 (95%), Positives = 98/100 (98%)
 Frame = -2

Query: 300 VEDKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPL 121
           VEDK+EPQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMY+EVFNRGVIPL
Sbjct: 81  VEDKDEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPL 140

Query: 120 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESMEVLEETL 1
           AYSIKKKNKAGE+NTYLDGIYLLFTYFTKPESMEVLE TL
Sbjct: 141 AYSIKKKNKAGESNTYLDGIYLLFTYFTKPESMEVLEATL 180


>ref|XP_002518855.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223541842|gb|EEF43388.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 205

 Score =  194 bits (493), Expect = 6e-48
 Identities = 94/100 (94%), Positives = 97/100 (97%)
 Frame = -2

Query: 300 VEDKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPL 121
           VEDKE PQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMY+EVFNRGVIPL
Sbjct: 87  VEDKEPPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPL 146

Query: 120 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESMEVLEETL 1
           AYSIKKKNKAGETNTYLDGIYLLFTYFTKPES+E+LE TL
Sbjct: 147 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESIEMLEATL 186


>gb|AFK44002.1| unknown [Lotus japonicus]
          Length = 209

 Score =  191 bits (486), Expect = 4e-47
 Identities = 92/99 (92%), Positives = 96/99 (96%)
 Frame = -2

Query: 297 EDKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPLA 118
           E+KEEPQCPPGLRQYETMAVLRPDMSEDERL LTQKYEELLVAGGGMY+EVFNRGVIPLA
Sbjct: 92  EEKEEPQCPPGLRQYETMAVLRPDMSEDERLALTQKYEELLVAGGGMYVEVFNRGVIPLA 151

Query: 117 YSIKKKNKAGETNTYLDGIYLLFTYFTKPESMEVLEETL 1
           YSIKKKNKAGETNTYLDGIYLL+TYFTKPES+  LEETL
Sbjct: 152 YSIKKKNKAGETNTYLDGIYLLYTYFTKPESIVALEETL 190


>ref|NP_001236420.1| uncharacterized protein LOC100500072 [Glycine max]
           gi|255628961|gb|ACU14825.1| unknown [Glycine max]
          Length = 214

 Score =  190 bits (482), Expect = 1e-46
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -2

Query: 300 VEDKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPL 121
           VE+KEEPQCPPGLRQYETM VLRPDMSEDERL LTQKYEE+LVAGGGMY+EVFNRGVIPL
Sbjct: 96  VEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPL 155

Query: 120 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESMEVLEETL 1
           AYSIKKKNKAGETNTYLDGIYLLFTYFTKPES+  LEET+
Sbjct: 156 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETM 195


>ref|NP_001236145.1| uncharacterized protein LOC100305490 [Glycine max]
           gi|255625673|gb|ACU13181.1| unknown [Glycine max]
          Length = 214

 Score =  190 bits (482), Expect = 1e-46
 Identities = 91/100 (91%), Positives = 96/100 (96%)
 Frame = -2

Query: 300 VEDKEEPQCPPGLRQYETMAVLRPDMSEDERLTLTQKYEELLVAGGGMYIEVFNRGVIPL 121
           VE+KEEPQCPPGLRQYETM VLRPDMSEDERL LTQKYEE+LVAGGGMY+EVFNRGVIPL
Sbjct: 96  VEEKEEPQCPPGLRQYETMMVLRPDMSEDERLALTQKYEEVLVAGGGMYVEVFNRGVIPL 155

Query: 120 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESMEVLEETL 1
           AYSIKKKNKAGETNTYLDGIYLLFTYFTKPES+  LEET+
Sbjct: 156 AYSIKKKNKAGETNTYLDGIYLLFTYFTKPESITPLEETM 195


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