BLASTX nr result

ID: Bupleurum21_contig00002002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00002002
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517918.1| structural constituent of cell wall, putativ...   116   3e-41
ref|XP_003633256.1| PREDICTED: uncharacterized protein LOC100264...   115   8e-41
ref|XP_002272844.1| PREDICTED: uncharacterized protein LOC100264...   115   8e-41
ref|XP_002325597.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-38
ref|XP_003539923.1| PREDICTED: uncharacterized protein LOC100810...   108   2e-33

>ref|XP_002517918.1| structural constituent of cell wall, putative [Ricinus communis]
           gi|223542900|gb|EEF44436.1| structural constituent of
           cell wall, putative [Ricinus communis]
          Length = 536

 Score =  116 bits (291), Expect(2) = 3e-41
 Identities = 60/112 (53%), Positives = 69/112 (61%), Gaps = 13/112 (11%)
 Frame = +1

Query: 532 DGYVTSGPHPTLSPGNAYMMYNVESGTPSHMPQS-HIQQSGYS------QNQQPPTATNM 690
           DGY T GPH  L PG+AYMMY+ E G   H PQ  H  Q GY       QN Q    TNM
Sbjct: 408 DGYATGGPHSALPPGSAYMMYDSEGGRAHHPPQQPHFSQGGYPPTNLSLQNPQSAPGTNM 467

Query: 691 MVRPQ------RNHPYGELFEKLISMGFRGDQVASVIQRLEENGQPVDFNAV 828
           M R        RNHPY EL +KL+SMGFR + +  VIQR+EE+GQP+DFNAV
Sbjct: 468 MARNPSHANFVRNHPYSELIDKLVSMGFRAEHIVGVIQRMEESGQPLDFNAV 519



 Score = 78.6 bits (192), Expect(2) = 3e-41
 Identities = 52/155 (33%), Positives = 66/155 (42%), Gaps = 10/155 (6%)
 Frame = +3

Query: 3   PQGLTLSQGYYLQSVQLSNIXXXXXXXXXXXXXXXXXXRTP---------PQPTQSQVNQ 155
           PQ +T  Q YYL   QL N                    TP         PQP Q+Q+NQ
Sbjct: 236 PQNVTQQQSYYLPPAQLPNPPAQAQHPQGPYMSADPQYGTPQIQDMTRVAPQPAQTQINQ 295

Query: 156 TPHNHSVSXXXXXXXXXXXXXXXXXXXTSLHPQIRASSPAAYSHYMP-GQAANNPTPEIF 332
           TP     +                     + PQ+R SSPA Y  Y P GQ  N+  PE  
Sbjct: 296 TPPGPQFTQYQHQWPQQLPQQVQAPQQPPMQPQMRPSSPAVYPTYPPQGQPTNSSPPETM 355

Query: 333 PNSMPMKMSFSGNSQPTSSHAEAMSYGYVGVSRPV 437
            +SMPM++S++   QP SS  +A+ YGY G  R V
Sbjct: 356 SSSMPMQLSYAAVPQPLSSGTDAIPYGY-GAGRTV 389


>ref|XP_003633256.1| PREDICTED: uncharacterized protein LOC100264321 isoform 2 [Vitis
           vinifera]
          Length = 560

 Score =  115 bits (288), Expect(2) = 8e-41
 Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 11/110 (10%)
 Frame = +1

Query: 532 DGYVTSGPHPTLSPGNAYMMYNVESGT-----PSHMPQS-HIQQSGYSQNQQPPTATNMM 693
           D Y  SGPHP L PGNAYMMY+ E+       P H PQ  +   S  SQN QP   +N+M
Sbjct: 433 DAYAASGPHPALHPGNAYMMYDNEARAHHPPQPPHFPQGVYPPVSVSSQNPQPTVGSNLM 492

Query: 694 VR-----PQRNHPYGELFEKLISMGFRGDQVASVIQRLEENGQPVDFNAV 828
           VR     P RNHPY E  EKL++MG+RGD V +VIQR+EE+GQP+DFN++
Sbjct: 493 VRNSGQPPPRNHPYNEWIEKLMNMGYRGDHVVNVIQRMEESGQPIDFNSL 542



 Score = 78.6 bits (192), Expect(2) = 8e-41
 Identities = 56/163 (34%), Positives = 65/163 (39%), Gaps = 18/163 (11%)
 Frame = +3

Query: 3   PQGLTLSQGYYLQSVQLSNIXXXXXXXXXXXXXXXXXXRTP---------PQPTQSQVNQ 155
           PQ +T S  YYL S QL N                   RT          PQP QSQVNQ
Sbjct: 252 PQNITQSPSYYLPSTQLPNATAQTQHPQSQYLPSDPQYRTQQLQDIPRVAPQPAQSQVNQ 311

Query: 156 TPHNHSV--------SXXXXXXXXXXXXXXXXXXXTSLHPQIRASSPAAYSHY-MPGQAA 308
            P   S                              S+ PQ R  +   Y  Y  P Q  
Sbjct: 312 APQVPSFPQYQQQWPQQMTQQMPQQMPQQVQMPQQPSMQPQNRPPTTTVYPPYSAPAQPT 371

Query: 309 NNPTPEIFPNSMPMKMSFSGNSQPTSSHAEAMSYGYVGVSRPV 437
           N   PE+ P+SMPM+MSFSG SQP +S A+ + YGY    RPV
Sbjct: 372 NASPPEMLPSSMPMQMSFSGISQPGASRADTLPYGYGAAGRPV 414


>ref|XP_002272844.1| PREDICTED: uncharacterized protein LOC100264321 isoform 1 [Vitis
           vinifera]
          Length = 550

 Score =  115 bits (288), Expect(2) = 8e-41
 Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 11/110 (10%)
 Frame = +1

Query: 532 DGYVTSGPHPTLSPGNAYMMYNVESGT-----PSHMPQS-HIQQSGYSQNQQPPTATNMM 693
           D Y  SGPHP L PGNAYMMY+ E+       P H PQ  +   S  SQN QP   +N+M
Sbjct: 423 DAYAASGPHPALHPGNAYMMYDNEARAHHPPQPPHFPQGVYPPVSVSSQNPQPTVGSNLM 482

Query: 694 VR-----PQRNHPYGELFEKLISMGFRGDQVASVIQRLEENGQPVDFNAV 828
           VR     P RNHPY E  EKL++MG+RGD V +VIQR+EE+GQP+DFN++
Sbjct: 483 VRNSGQPPPRNHPYNEWIEKLMNMGYRGDHVVNVIQRMEESGQPIDFNSL 532



 Score = 78.6 bits (192), Expect(2) = 8e-41
 Identities = 56/163 (34%), Positives = 65/163 (39%), Gaps = 18/163 (11%)
 Frame = +3

Query: 3   PQGLTLSQGYYLQSVQLSNIXXXXXXXXXXXXXXXXXXRTP---------PQPTQSQVNQ 155
           PQ +T S  YYL S QL N                   RT          PQP QSQVNQ
Sbjct: 242 PQNITQSPSYYLPSTQLPNATAQTQHPQSQYLPSDPQYRTQQLQDIPRVAPQPAQSQVNQ 301

Query: 156 TPHNHSV--------SXXXXXXXXXXXXXXXXXXXTSLHPQIRASSPAAYSHY-MPGQAA 308
            P   S                              S+ PQ R  +   Y  Y  P Q  
Sbjct: 302 APQVPSFPQYQQQWPQQMTQQMPQQMPQQVQMPQQPSMQPQNRPPTTTVYPPYSAPAQPT 361

Query: 309 NNPTPEIFPNSMPMKMSFSGNSQPTSSHAEAMSYGYVGVSRPV 437
           N   PE+ P+SMPM+MSFSG SQP +S A+ + YGY    RPV
Sbjct: 362 NASPPEMLPSSMPMQMSFSGISQPGASRADTLPYGYGAAGRPV 404


>ref|XP_002325597.1| predicted protein [Populus trichocarpa] gi|222862472|gb|EEE99978.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  115 bits (289), Expect(2) = 2e-38
 Identities = 60/108 (55%), Positives = 70/108 (64%), Gaps = 7/108 (6%)
 Frame = +1

Query: 526 HPDGYVTSGPHPTLSPGNAYMMYNVESGTPSHMPQ-SHIQQSGYSQNQQPPTATNMMVRP 702
           H D Y T+GPHP   P +AYM+Y+ E G   H PQ SH  Q GY    QP   T M+ R 
Sbjct: 413 HSDAYATAGPHPGQPPVSAYMVYDGEGGRTHHPPQQSHFPQGGYPP--QPAAGTGMLPRH 470

Query: 703 Q------RNHPYGELFEKLISMGFRGDQVASVIQRLEENGQPVDFNAV 828
                  RNHPY +L EKL+SMGFRGD  ASVIQR+EE+G+PVDFNAV
Sbjct: 471 SSPSHFFRNHPYSDLIEKLVSMGFRGDHAASVIQRMEESGEPVDFNAV 518



 Score = 70.1 bits (170), Expect(2) = 2e-38
 Identities = 49/148 (33%), Positives = 59/148 (39%), Gaps = 10/148 (6%)
 Frame = +3

Query: 3   PQGLTLSQGYYLQSVQLSNIXXXXXXXXXXXXXXXXXXRTP---------PQPTQSQVNQ 155
           PQ +T  Q YYL   QL                     RTP         PQP Q QVNQ
Sbjct: 241 PQNVTQQQSYYLPPAQLPTPAAPIQHPQNQYLPSDPQYRTPQMQDVSRVAPQPAQPQVNQ 300

Query: 156 TPHNHSVSXXXXXXXXXXXXXXXXXXXTSLHPQIRASSPAAYSHYMPGQAANNPTP-EIF 332
           T                          T   PQI+  S  AY+ Y P     NP+P E  
Sbjct: 301 TLQGQQFPQYQQQWPQQLPLQVQPPQQTQ--PQIKPPSTTAYTPYQPPCQPTNPSPQETL 358

Query: 333 PNSMPMKMSFSGNSQPTSSHAEAMSYGY 416
           PNS+PM++S+SG  Q  +S A+ M YGY
Sbjct: 359 PNSLPMQVSYSGVPQSLASRADTMPYGY 386


>ref|XP_003539923.1| PREDICTED: uncharacterized protein LOC100810231 isoform 2 [Glycine
           max]
          Length = 541

 Score =  108 bits (269), Expect(2) = 2e-33
 Identities = 60/110 (54%), Positives = 67/110 (60%), Gaps = 11/110 (10%)
 Frame = +1

Query: 532 DGYVTSGPHPTLSP-GNAYMMYNVESGTPSHMPQSHIQQSGYSQN----QQPPTATNMMV 696
           D Y  SG  P L P   AYMMY+ E G   H PQ H  Q GY       Q PP   N+MV
Sbjct: 413 DMYGPSGNLPALPPPSGAYMMYDGEGGRTHHPPQPHFAQPGYPPTSASLQNPPPGLNLMV 472

Query: 697 RPQ------RNHPYGELFEKLISMGFRGDQVASVIQRLEENGQPVDFNAV 828
           R        RNHPY EL EKL+SMGFRGD VASVIQR+EE+GQ +DFN+V
Sbjct: 473 RNPNQSQFIRNHPYNELIEKLVSMGFRGDHVASVIQRMEESGQAIDFNSV 522



 Score = 60.8 bits (146), Expect(2) = 2e-33
 Identities = 43/120 (35%), Positives = 49/120 (40%), Gaps = 13/120 (10%)
 Frame = +3

Query: 117 RTP----PQPTQSQVNQTP-----HNHSVSXXXXXXXXXXXXXXXXXXXTSLHP----QI 257
           RTP    PQPT SQV  +P     H                         S  P    Q+
Sbjct: 275 RTPQHVAPQPTPSQVTPSPVQQFSHYQQQQQQPQQQQPQQQQQWSQQVLPSQPPPMQSQV 334

Query: 258 RASSPAAYSHYMPGQAANNPTPEIFPNSMPMKMSFSGNSQPTSSHAEAMSYGYVGVSRPV 437
           R  SP  Y  Y P QA N    E  PNSM M+M +SG   P SS  +A+ YGY G  R V
Sbjct: 335 RPPSPNVYPPYQPNQATNPSPAETLPNSMAMQMPYSGVPPPGSSRTDAIPYGYGGAGRTV 394


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