BLASTX nr result

ID: Bupleurum21_contig00000980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000980
         (649 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV27481.1| fasciclin-like arabinogalactan protein 10 [Gossyp...   197   1e-48
gb|ABV27482.1| fasciclin-like arabinogalactan protein 11 [Gossyp...   195   5e-48
ref|XP_002522745.1| conserved hypothetical protein [Ricinus comm...   194   2e-47
ref|XP_002316776.1| fasciclin-like arabinogalactan protein [Popu...   192   6e-47
ref|XP_002298869.1| fasciclin-like arabinogalactan protein [Popu...   192   6e-47

>gb|ABV27481.1| fasciclin-like arabinogalactan protein 10 [Gossypium hirsutum]
          Length = 414

 Score =  197 bits (502), Expect = 1e-48
 Identities = 93/127 (73%), Positives = 111/127 (87%)
 Frame = -3

Query: 647 AQKTYEDNVDGGLTIFCPIDDAFKSFLPKFKNLTIAGKQALLESHAVPVYESMQMLKQNN 468
           A  TYEDN++GGLT+FCP+DDAFK+FLPK+KNLT +GK++ LE   VPVY+S+ MLK NN
Sbjct: 211 AMGTYEDNLNGGLTVFCPLDDAFKAFLPKYKNLTASGKESFLEFFGVPVYQSLSMLKSNN 270

Query: 467 GLMNTLATDGASKFDITVQNDGAQVTLKTKLVTAKITGTLFDEQPLAIYTLNNVLLPKEL 288
           GLMNTLATDGASKFD TVQNDG QVTLKTK+ T KITGTL DEQP+AIYT++ VL+P+EL
Sbjct: 271 GLMNTLATDGASKFDFTVQNDGEQVTLKTKINTVKITGTLLDEQPVAIYTIDKVLMPREL 330

Query: 287 FKAALSP 267
           FKAA +P
Sbjct: 331 FKAAPTP 337


>gb|ABV27482.1| fasciclin-like arabinogalactan protein 11 [Gossypium hirsutum]
          Length = 417

 Score =  195 bits (496), Expect = 5e-48
 Identities = 94/127 (74%), Positives = 110/127 (86%)
 Frame = -3

Query: 647 AQKTYEDNVDGGLTIFCPIDDAFKSFLPKFKNLTIAGKQALLESHAVPVYESMQMLKQNN 468
           A  TYEDNV+GGLT+FCP+DD FK+FLPK+KNLT + K + LE   VPVY+S+ MLK NN
Sbjct: 211 AMGTYEDNVNGGLTVFCPMDDPFKAFLPKYKNLTASKKASFLEFFGVPVYQSLSMLKSNN 270

Query: 467 GLMNTLATDGASKFDITVQNDGAQVTLKTKLVTAKITGTLFDEQPLAIYTLNNVLLPKEL 288
           GLMNTLATDGASKFD TVQN+G +VTLKT++ TAKITGTL DEQP+AIYT++ VLLPKEL
Sbjct: 271 GLMNTLATDGASKFDFTVQNEGEEVTLKTRVNTAKITGTLIDEQPVAIYTIDKVLLPKEL 330

Query: 287 FKAALSP 267
           FKAALSP
Sbjct: 331 FKAALSP 337


>ref|XP_002522745.1| conserved hypothetical protein [Ricinus communis]
           gi|223537983|gb|EEF39596.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  194 bits (492), Expect = 2e-47
 Identities = 91/123 (73%), Positives = 104/123 (84%)
 Frame = -3

Query: 647 AQKTYEDNVDGGLTIFCPIDDAFKSFLPKFKNLTIAGKQALLESHAVPVYESMQMLKQNN 468
           A  TY+DN+DGGLT+FCP+DD FK+FLPK+KNLT AGK + LE   VP+Y+S+ MLK NN
Sbjct: 213 ASSTYQDNIDGGLTVFCPLDDPFKAFLPKYKNLTAAGKVSFLEFFGVPIYQSLSMLKSNN 272

Query: 467 GLMNTLATDGASKFDITVQNDGAQVTLKTKLVTAKITGTLFDEQPLAIYTLNNVLLPKEL 288
           G+MNTLATDGA+KFD TVQNDG  VTLKTK  TAKI GTL DEQPLAIYT+N VLLPKEL
Sbjct: 273 GVMNTLATDGANKFDFTVQNDGEDVTLKTKTATAKIIGTLIDEQPLAIYTINKVLLPKEL 332

Query: 287 FKA 279
           FKA
Sbjct: 333 FKA 335


>ref|XP_002316776.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]
           gi|222859841|gb|EEE97388.1| fasciclin-like
           arabinogalactan protein [Populus trichocarpa]
          Length = 324

 Score =  192 bits (487), Expect = 6e-47
 Identities = 90/127 (70%), Positives = 106/127 (83%)
 Frame = -3

Query: 647 AQKTYEDNVDGGLTIFCPIDDAFKSFLPKFKNLTIAGKQALLESHAVPVYESMQMLKQNN 468
           A KTY+D+VDGGLT+FCP+DD FK+F PKFKNLT +GK + LE   VP+Y+S+ MLK NN
Sbjct: 189 ASKTYQDSVDGGLTVFCPLDDPFKAFFPKFKNLTASGKVSFLEFFGVPIYQSLAMLKSNN 248

Query: 467 GLMNTLATDGASKFDITVQNDGAQVTLKTKLVTAKITGTLFDEQPLAIYTLNNVLLPKEL 288
           G+MNTLATDG  KFD TVQNDG  VTLKT+ +TAKI GTL DEQPLAIYT++ VLLPKEL
Sbjct: 249 GIMNTLATDGEKKFDFTVQNDGEDVTLKTRSITAKIVGTLIDEQPLAIYTIDKVLLPKEL 308

Query: 287 FKAALSP 267
           FKAA +P
Sbjct: 309 FKAAPTP 315


>ref|XP_002298869.1| fasciclin-like arabinogalactan protein [Populus trichocarpa]
           gi|222846127|gb|EEE83674.1| fasciclin-like
           arabinogalactan protein [Populus trichocarpa]
          Length = 349

 Score =  192 bits (487), Expect = 6e-47
 Identities = 90/127 (70%), Positives = 108/127 (85%)
 Frame = -3

Query: 647 AQKTYEDNVDGGLTIFCPIDDAFKSFLPKFKNLTIAGKQALLESHAVPVYESMQMLKQNN 468
           A KTY+D +DGGLT+FCP+DD FK+FLPKFKNLT +GK++LL+   VPVY+S+ MLK NN
Sbjct: 187 ASKTYQDTIDGGLTVFCPLDDPFKAFLPKFKNLTASGKESLLQFFGVPVYQSLAMLKSNN 246

Query: 467 GLMNTLATDGASKFDITVQNDGAQVTLKTKLVTAKITGTLFDEQPLAIYTLNNVLLPKEL 288
           G+MNTLAT+G  KFD TVQNDG  VTLKT+  TAKI GTL DEQPLAIY+++ VLLPKEL
Sbjct: 247 GIMNTLATNGDKKFDFTVQNDGEDVTLKTRGTTAKIVGTLIDEQPLAIYSIDKVLLPKEL 306

Query: 287 FKAALSP 267
           FKAAL+P
Sbjct: 307 FKAALTP 313


Top