BLASTX nr result

ID: Bupleurum21_contig00000974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000974
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_003632721.1| PREDICTED: thioredoxin-like 3-1, chloroplast...    96   3e-18
ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplast...    96   3e-18
ref|XP_002534371.1| electron transporter, putative [Ricinus comm...    94   2e-17
gb|AFK34102.1| unknown [Lotus japonicus]                               80   2e-13

>ref|XP_002322732.1| predicted protein [Populus trichocarpa] gi|222867362|gb|EEF04493.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  103 bits (258), Expect = 1e-20
 Identities = 65/115 (56%), Positives = 79/115 (68%), Gaps = 8/115 (6%)
 Frame = +1

Query: 235 MSILSPNSHILYREI--HCKDQNQQLLC---VGSFLNPSKSFAFG---FDQTRNNSDCKK 390
           MS+L+ N H+LYRE+  H KDQ QQL     VGS L  S+  +FG   FD  RN   CKK
Sbjct: 1   MSVLAANPHVLYREVQYHNKDQQQQLWSGGGVGSSLLLSQRTSFGCSWFDG-RNKDLCKK 59

Query: 391 IVKRDCKVAAASFFPDLSRPASVQMEPITDNDHLDQILAKATEHSQPIIIDWMAS 555
             KRD KVAA+  +P ++RP SV+MEPI D+ HLD+IL +A E SQPIIIDWMAS
Sbjct: 60  NSKRDLKVAAS--WPGMTRPTSVEMEPIDDSHHLDKILLQAHELSQPIIIDWMAS 112


>ref|XP_003632721.1| PREDICTED: thioredoxin-like 3-1, chloroplastic isoform 2 [Vitis
           vinifera]
          Length = 179

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 55/107 (51%), Positives = 72/107 (67%)
 Frame = +1

Query: 235 MSILSPNSHILYREIHCKDQNQQLLCVGSFLNPSKSFAFGFDQTRNNSDCKKIVKRDCKV 414
           MSIL+ N+HI+YRE+  +D   QL   GS L  S+S  FG D  R   + +K  KRD +V
Sbjct: 1   MSILAANTHIVYREVLLRDPQNQLSGGGSCLFWSRSPGFGVDGRRG--EWRKTKKRDFRV 58

Query: 415 AAASFFPDLSRPASVQMEPITDNDHLDQILAKATEHSQPIIIDWMAS 555
            A  F+PD++RP  ++M+PI D D LDQILA+A E  QPIIIDWMA+
Sbjct: 59  EA--FWPDMTRPNVIEMQPIKDCDQLDQILARAQELPQPIIIDWMAA 103


>ref|XP_002275794.1| PREDICTED: thioredoxin-like 3-1, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 185

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 55/107 (51%), Positives = 72/107 (67%)
 Frame = +1

Query: 235 MSILSPNSHILYREIHCKDQNQQLLCVGSFLNPSKSFAFGFDQTRNNSDCKKIVKRDCKV 414
           MSIL+ N+HI+YRE+  +D   QL   GS L  S+S  FG D  R   + +K  KRD +V
Sbjct: 1   MSILAANTHIVYREVLLRDPQNQLSGGGSCLFWSRSPGFGVDGRRG--EWRKTKKRDFRV 58

Query: 415 AAASFFPDLSRPASVQMEPITDNDHLDQILAKATEHSQPIIIDWMAS 555
            A  F+PD++RP  ++M+PI D D LDQILA+A E  QPIIIDWMA+
Sbjct: 59  EA--FWPDMTRPNVIEMQPIKDCDQLDQILARAQELPQPIIIDWMAA 103


>ref|XP_002534371.1| electron transporter, putative [Ricinus communis]
           gi|223525411|gb|EEF28009.1| electron transporter,
           putative [Ricinus communis]
          Length = 190

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 54/114 (47%), Positives = 70/114 (61%), Gaps = 7/114 (6%)
 Frame = +1

Query: 235 MSILSPNSHILYREIHC-KDQNQQLLCVGS------FLNPSKSFAFGFDQTRNNSDCKKI 393
           MS L+ NSHILYRE++  +DQ QQ     S       L    S  +     +     KKI
Sbjct: 1   MSSLAANSHILYREVYNQRDQQQQHQLWSSSGSCCLLLQQRNSGCYNLFDCKKTRSFKKI 60

Query: 394 VKRDCKVAAASFFPDLSRPASVQMEPITDNDHLDQILAKATEHSQPIIIDWMAS 555
            KRD +V A  F+PD++RP S++MEPI D+D LDQIL KA E SQP++IDWMA+
Sbjct: 61  SKRDLRVEA--FWPDMTRPTSIEMEPINDSDQLDQILLKAQELSQPVLIDWMAA 112


>gb|AFK34102.1| unknown [Lotus japonicus]
          Length = 187

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 49/109 (44%), Positives = 68/109 (62%), Gaps = 2/109 (1%)
 Frame = +1

Query: 235 MSILSPNSHILYREIHCKDQNQQLLCVGS--FLNPSKSFAFGFDQTRNNSDCKKIVKRDC 408
           MS++   SH LY + H +D+   L  VGS   L PSKS   G    +  S   KI KR+ 
Sbjct: 1   MSVIGACSHFLYGDFHQRDEQSPLYLVGSRGCLFPSKS-GCGNSLIQRKSREGKIRKRNL 59

Query: 409 KVAAASFFPDLSRPASVQMEPITDNDHLDQILAKATEHSQPIIIDWMAS 555
           +V A     D+SRP++V++ PI D++ LDQIL +A ++S+PIIIDWMAS
Sbjct: 60  RVEAMW---DISRPSTVELIPINDSEQLDQILVRAQQNSEPIIIDWMAS 105


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