BLASTX nr result

ID: Bupleurum21_contig00000962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000962
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264344.1| PREDICTED: uncharacterized protein LOC100266...   347   4e-93
ref|XP_004146124.1| PREDICTED: uncharacterized protein LOC101211...   320   5e-85
emb|CBI37457.3| unnamed protein product [Vitis vinifera]              316   9e-84
ref|XP_002326587.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
gb|ABK93480.1| unknown [Populus trichocarpa]                          315   2e-83

>ref|XP_002264344.1| PREDICTED: uncharacterized protein LOC100266685 [Vitis vinifera]
          Length = 291

 Score =  347 bits (890), Expect = 4e-93
 Identities = 170/285 (59%), Positives = 205/285 (71%), Gaps = 2/285 (0%)
 Frame = -3

Query: 1102 MDSPEKKSHRSGLLRFSFVLIFYIFLLFTTSFMLVLISLLIGNFSISDPISIPSQCKIVS 923
            MDSPE+ S R+   R   +L   IF    +S M+ L+++ +GN S+S P+S+PSQCKIVS
Sbjct: 1    MDSPEEPSERTRTKRGFHLLSISIFAFLLSSLMVALVAVFVGNLSVSSPVSVPSQCKIVS 60

Query: 922  SGVDLRSSKVCELGFLNYKAKNVFYPSERKKFRCHYDYYWASIFKVKYIDLSGQAHFASA 743
            S VDLRSSKVCELG LNYKAK+VFYP E++KFRCHYDYYWAS+FKV+Y D  GQ      
Sbjct: 61   SSVDLRSSKVCELGLLNYKAKHVFYPLEKRKFRCHYDYYWASVFKVEYKDSLGQTRLTLT 120

Query: 742  EAPDEALPHDCRPNFGVAWLTKDQFKVNETYDCWYTLGISKVYLYNDGLFNCHANDPSTP 563
            EAP+EALP DCRPNFG AWLTKD+FKVNETYDCWY  GISKV +Y D  F+C A +PST 
Sbjct: 121  EAPNEALPLDCRPNFGAAWLTKDKFKVNETYDCWYASGISKVSIYQDSFFSCQAKEPSTI 180

Query: 562  EMVRRYFFLSSKMLISWLASLARVRRWRWDVVFGVFTGFSTSLISISLARLLHVAFSPIR 383
            EM+RRY  LS+++L SWLAS  R + WR + V GV TGFSTSLISISL R+LH   S + 
Sbjct: 181  EMIRRYSILSTRILQSWLASQGRGKYWRLETVAGVITGFSTSLISISLVRILHQVKSWLP 240

Query: 382  RI--RAAWAVPMAVRLKQTCFFVAYFSFAGWLIIKYGKRLGLPGI 254
            RI  R       +VR ++  F V Y  F GWL I+YGKRLG+  I
Sbjct: 241  RILKRQLLLAVKSVRFRRAFFLVTYVIFMGWLAIEYGKRLGISNI 285


>ref|XP_004146124.1| PREDICTED: uncharacterized protein LOC101211843 [Cucumis sativus]
          Length = 303

 Score =  320 bits (820), Expect = 5e-85
 Identities = 157/286 (54%), Positives = 200/286 (69%), Gaps = 1/286 (0%)
 Frame = -3

Query: 1087 KKSHRSGLLRFSFVLIFYIFLLFTTSFMLVLISLLIGNFSISDPISIPSQCKIVSSGVDL 908
            K+   +  +R+   L+  +   F  +  L L+++ + N SI+ PIS+ SQCKIVSS VDL
Sbjct: 16   KRGFLAVTMRWCAALLLPVVSFFVVTLSLSLVAVFVANSSITSPISLRSQCKIVSSSVDL 75

Query: 907  RSSKVCELGFLNYKAKNVFYPSERKKFRCHYDYYWASIFKVKYID-LSGQAHFASAEAPD 731
            RSSKVCELG LNYKAKNVFYP ER KFRC YDYYWAS+FKV+  D  SG+A  A AEAP+
Sbjct: 76   RSSKVCELGLLNYKAKNVFYPYERNKFRCRYDYYWASVFKVEMKDHFSGKARVALAEAPN 135

Query: 730  EALPHDCRPNFGVAWLTKDQFKVNETYDCWYTLGISKVYLYNDGLFNCHANDPSTPEMVR 551
            EALPH CRPNFG AWL K +FKVNETYDCWY+ GISKV L  DG   C A +P+T EM++
Sbjct: 136  EALPHKCRPNFGAAWLAKYKFKVNETYDCWYSSGISKVSLDYDGFSGCQAQEPTTIEMIK 195

Query: 550  RYFFLSSKMLISWLASLARVRRWRWDVVFGVFTGFSTSLISISLARLLHVAFSPIRRIRA 371
            RY+FL +K+L+SW +S  +   WRWD++ G+ TGFSTSLI+I++ R+L      + R   
Sbjct: 196  RYYFLCTKILLSWYSSKEKAIFWRWDMLGGLVTGFSTSLITITVLRILQPLIPWMLRY-- 253

Query: 370  AWAVPMAVRLKQTCFFVAYFSFAGWLIIKYGKRLGLPGIKELISGR 233
             +     + L + CF VAYFSF GWLII+YGKRL LP I  ++  R
Sbjct: 254  -FTTRFFIHLNRACFLVAYFSFVGWLIIQYGKRLSLPEIFNILKSR 298


>emb|CBI37457.3| unnamed protein product [Vitis vinifera]
          Length = 310

 Score =  316 bits (809), Expect = 9e-84
 Identities = 149/233 (63%), Positives = 178/233 (76%)
 Frame = -3

Query: 1102 MDSPEKKSHRSGLLRFSFVLIFYIFLLFTTSFMLVLISLLIGNFSISDPISIPSQCKIVS 923
            MDSPE+ S R+   R   +L   IF    +S M+ L+++ +GN S+S P+S+PSQCKIVS
Sbjct: 1    MDSPEEPSERTRTKRGFHLLSISIFAFLLSSLMVALVAVFVGNLSVSSPVSVPSQCKIVS 60

Query: 922  SGVDLRSSKVCELGFLNYKAKNVFYPSERKKFRCHYDYYWASIFKVKYIDLSGQAHFASA 743
            S VDLRSSKVCELG LNYKAK+VFYP E++KFRCHYDYYWAS+FKV+Y D  GQ      
Sbjct: 61   SSVDLRSSKVCELGLLNYKAKHVFYPLEKRKFRCHYDYYWASVFKVEYKDSLGQTRLTLT 120

Query: 742  EAPDEALPHDCRPNFGVAWLTKDQFKVNETYDCWYTLGISKVYLYNDGLFNCHANDPSTP 563
            EAP+EALP DCRPNFG AWLTKD+FKVNETYDCWY  GISKV +Y D  F+C A +PST 
Sbjct: 121  EAPNEALPLDCRPNFGAAWLTKDKFKVNETYDCWYASGISKVSIYQDSFFSCQAKEPSTI 180

Query: 562  EMVRRYFFLSSKMLISWLASLARVRRWRWDVVFGVFTGFSTSLISISLARLLH 404
            EM+RRY  LS+++L SWLAS  R + WR + V GV TGFSTSLISISL R+LH
Sbjct: 181  EMIRRYSILSTRILQSWLASQGRGKYWRLETVAGVITGFSTSLISISLVRILH 233


>ref|XP_002326587.1| predicted protein [Populus trichocarpa] gi|222833909|gb|EEE72386.1|
            predicted protein [Populus trichocarpa]
          Length = 299

 Score =  315 bits (807), Expect = 2e-83
 Identities = 160/295 (54%), Positives = 203/295 (68%), Gaps = 13/295 (4%)
 Frame = -3

Query: 1099 DSPE--KKSHRSGLLRFSFVLIFYIFLLFTTSFMLVLISLLIGNFSISDPISIPSQCKIV 926
            ++PE  KK       R +  L+F IF   + S +L  +++ +G+ SI+ P+S+PSQCKI+
Sbjct: 6    ETPENGKKGFIYLAFRLTLALLFPIFAFLSLSILLGFLAIFMGHLSITTPLSLPSQCKIL 65

Query: 925  SSGVDLRSSKVCELGFLNYKAKNVFYPSERKKFRCHYDYYWASIFKVKYIDLS-GQAHFA 749
            SS VDLRSSK+CE GFLNYKAK+VFYP  R KFRC YDYYWAS+F+V+Y D S GQ  FA
Sbjct: 66   SSSVDLRSSKICEPGFLNYKAKHVFYPYNRSKFRCRYDYYWASVFEVEYKDYSLGQTQFA 125

Query: 748  SAEAPDEALPHDCRPNFGVAWLTKDQFKVNETYDCWYTLGISKVYLYNDGLFNCHANDPS 569
             AEAP+EALP +CRPNFG AWLTKD+FKVN+TYDCWYT GI KV LY D LF+C A DPS
Sbjct: 126  LAEAPNEALPLNCRPNFGAAWLTKDKFKVNKTYDCWYTSGILKVSLYRDDLFSCQAKDPS 185

Query: 568  TPEMVRRYFFLSSKMLISWLA-SLARVRRWRWDVVFGVFTGFSTSLISISLARLLHVAFS 392
              EM++R+F LS +ML S L     +   WRW+ + GV  GFSTS+I+IS  R+L     
Sbjct: 186  QVEMIKRFFILSKEMLHSSLVQKKGKAGYWRWETIAGVIAGFSTSIITISFIRIL----- 240

Query: 391  PIRRIRAAWAVPMAVRL---------KQTCFFVAYFSFAGWLIIKYGKRLGLPGI 254
              + I++ + +P   R+         K+ CF VAY SF GWL I+YGKRLGLP I
Sbjct: 241  --QHIKSWFRLPSVARMFSHTNIVFFKRACFLVAYISFMGWLTIQYGKRLGLPEI 293


>gb|ABK93480.1| unknown [Populus trichocarpa]
          Length = 306

 Score =  315 bits (807), Expect = 2e-83
 Identities = 160/295 (54%), Positives = 203/295 (68%), Gaps = 13/295 (4%)
 Frame = -3

Query: 1099 DSPE--KKSHRSGLLRFSFVLIFYIFLLFTTSFMLVLISLLIGNFSISDPISIPSQCKIV 926
            ++PE  KK       R +  L+F IF   + S +L  +++ +G+ SI+ P+S+PSQCKI+
Sbjct: 13   ETPENGKKGFIYLAFRLTLALLFPIFAFLSLSILLGFLAIFMGHLSITTPLSLPSQCKIL 72

Query: 925  SSGVDLRSSKVCELGFLNYKAKNVFYPSERKKFRCHYDYYWASIFKVKYIDLS-GQAHFA 749
            SS VDLRSSK+CE GFLNYKAK+VFYP  R KFRC YDYYWAS+F+V+Y D S GQ  FA
Sbjct: 73   SSSVDLRSSKICEPGFLNYKAKHVFYPYNRSKFRCRYDYYWASVFEVEYKDYSLGQTQFA 132

Query: 748  SAEAPDEALPHDCRPNFGVAWLTKDQFKVNETYDCWYTLGISKVYLYNDGLFNCHANDPS 569
             AEAP+EALP +CRPNFG AWLTKD+FKVN+TYDCWYT GI KV LY D LF+C A DPS
Sbjct: 133  LAEAPNEALPLNCRPNFGAAWLTKDKFKVNKTYDCWYTSGILKVSLYRDDLFSCQAKDPS 192

Query: 568  TPEMVRRYFFLSSKMLISWLA-SLARVRRWRWDVVFGVFTGFSTSLISISLARLLHVAFS 392
              EM++R+F LS +ML S L     +   WRW+ + GV  GFSTS+I+IS  R+L     
Sbjct: 193  QVEMIKRFFILSKEMLHSSLVQKKGKAGYWRWETIAGVIAGFSTSIITISFIRIL----- 247

Query: 391  PIRRIRAAWAVPMAVRL---------KQTCFFVAYFSFAGWLIIKYGKRLGLPGI 254
              + I++ + +P   R+         K+ CF VAY SF GWL I+YGKRLGLP I
Sbjct: 248  --QHIKSWFRLPSVARMFSHTNIVFFKRACFLVAYISFMGWLTIQYGKRLGLPEI 300


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