BLASTX nr result
ID: Bupleurum21_contig00000952
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000952
(1514 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 734 0.0
ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putativ... 733 0.0
ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|2... 715 0.0
ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP... 713 0.0
ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 713 0.0
>ref|XP_002273443.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Vitis
vinifera]
Length = 732
Score = 734 bits (1896), Expect = 0.0
Identities = 374/487 (76%), Positives = 426/487 (87%)
Frame = -1
Query: 1463 QSPWDFSAFTESVTDEHARRSTTSIDYKINKAIQHSAISIPKDDDIPEESXXXXXXXXXX 1284
QSPWDF++++E+V +EHARRSTTS+D+KI+KA++ + IP DD E
Sbjct: 39 QSPWDFASYSETVAEEHARRSTTSVDFKISKALEQRRLPIPNQDDSSESESDHQEDYTPE 98
Query: 1283 XXXXXXXXXQKKKPFFSSSDGVSFRASSFMELNLSRPLLRACEALGYNKPTPIQAACIPL 1104
+K FF+ +DG SF A+SF+ELNLSRPLLRACEALGY KPTPIQAACIP+
Sbjct: 99 DADEAASVGGDRKSFFAPADGASFHANSFLELNLSRPLLRACEALGYTKPTPIQAACIPI 158
Query: 1103 AINGRDICASAITGSGKTAAFALPTLERLLCRSKGTPPAVRVLILTPTRELAVQVHSMVE 924
A+ GRDIC SAITGSGKTAAF+LPTLERLL R K A+RVL+LTPTRELAVQVHSM+E
Sbjct: 159 ALTGRDICGSAITGSGKTAAFSLPTLERLLFRPKRVQ-AIRVLVLTPTRELAVQVHSMME 217
Query: 923 KLAQFVKDIRCCLVVGGLSTKVQETALRSKPDIVVATPGRIIDHIRNSMSVHLEELAVLI 744
KLAQF DIRCCL+VGGLS+K+QETALRS PD+VVATPGR+IDH+RNSMSV LE+LAVLI
Sbjct: 218 KLAQFT-DIRCCLIVGGLSSKMQETALRSMPDVVVATPGRMIDHLRNSMSVDLEDLAVLI 276
Query: 743 LDEADRLLELGFSAEIRELIKECPKRRQTMLFSATMTEEVGELIKLSMNKPMRLSADPSS 564
LDEADRLLELGF+AEIREL++ CPKRRQTMLFSATMTEEV EL+KLSM KPMRL+ADPS+
Sbjct: 277 LDEADRLLELGFNAEIRELVRLCPKRRQTMLFSATMTEEVDELVKLSMTKPMRLAADPST 336
Query: 563 KRPAKLTEEVIRIRRAREGNQEAVVLAICSKTFTSKVIIFSGTKQAAHRLKILFGLSGFK 384
KRPA LTEEV+RIRR RE NQEAV+LA+CSKTFT+K IIFSGTKQAAHRLKILFGL+GFK
Sbjct: 337 KRPATLTEEVVRIRRMREVNQEAVLLALCSKTFTAKAIIFSGTKQAAHRLKILFGLAGFK 396
Query: 383 ASELHGNLTQAQRLDALELFRRQEVDFLIATDVAARGLDIIGVQTVINYACPRDLNSYVH 204
A+ELHGNLTQ QRLDALELFR+Q+VDFLIATDVAARGLDIIGVQTVINYACPRDL SYVH
Sbjct: 397 AAELHGNLTQVQRLDALELFRKQQVDFLIATDVAARGLDIIGVQTVINYACPRDLTSYVH 456
Query: 203 RVGRTARAGREGYAVTFVTDNDRSLLRAIMKRAGSKLKSRTVAEQSINKWADLIDQMEDQ 24
RVGRTARAGREGYAVTFVTDNDRSLL++I+KRAGSKL+SR VAEQSI KW+ +I+QMEDQ
Sbjct: 457 RVGRTARAGREGYAVTFVTDNDRSLLKSIVKRAGSKLRSRIVAEQSIIKWSHMIEQMEDQ 516
Query: 23 VASILQE 3
VA+ILQE
Sbjct: 517 VAAILQE 523
>ref|XP_002510554.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223551255|gb|EEF52741.1| dead box ATP-dependent RNA
helicase, putative [Ricinus communis]
Length = 783
Score = 733 bits (1892), Expect = 0.0
Identities = 380/495 (76%), Positives = 430/495 (86%), Gaps = 4/495 (0%)
Frame = -1
Query: 1475 NKNKQSPWDFSAFTESVTDEHARRSTTSIDYKINKAIQHSAI---SIPKDDDIPEESXXX 1305
N+ QSPWDF++++ESV +EHARRSTTS+DYKI+KA+Q ++ ++ +DDD +S
Sbjct: 53 NRKSQSPWDFASYSESVAEEHARRSTTSVDYKISKALQQRSVPLTTLDEDDDTASDSEPD 112
Query: 1304 XXXXXXXXXXXXXXXXQKK-KPFFSSSDGVSFRASSFMELNLSRPLLRACEALGYNKPTP 1128
+ K FF+S++G SF A+SFME+NLSRPLLRACE LGY KPTP
Sbjct: 113 KQEDYRAEEDEDVAHNADETKSFFASAEGASFHANSFMEINLSRPLLRACEVLGYTKPTP 172
Query: 1127 IQAACIPLAINGRDICASAITGSGKTAAFALPTLERLLCRSKGTPPAVRVLILTPTRELA 948
IQAACIPLA+ GRDIC SAITGSGKTAAFALPTLERLL R K A+RVLILTPTRELA
Sbjct: 173 IQAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRVQ-AIRVLILTPTRELA 231
Query: 947 VQVHSMVEKLAQFVKDIRCCLVVGGLSTKVQETALRSKPDIVVATPGRIIDHIRNSMSVH 768
VQVHSMVEKLAQF DIRCCL+VGGLSTKVQE+ALRS PDIVVATPGR+IDH+RN+MSV
Sbjct: 232 VQVHSMVEKLAQFT-DIRCCLIVGGLSTKVQESALRSMPDIVVATPGRMIDHLRNTMSVD 290
Query: 767 LEELAVLILDEADRLLELGFSAEIRELIKECPKRRQTMLFSATMTEEVGELIKLSMNKPM 588
L++LAVLILDEADRLLELGFSAEI EL++ CPKRRQTMLFSATMTEE+ ELIKLS+ KP+
Sbjct: 291 LDDLAVLILDEADRLLELGFSAEIHELVRLCPKRRQTMLFSATMTEEINELIKLSLTKPL 350
Query: 587 RLSADPSSKRPAKLTEEVIRIRRAREGNQEAVVLAICSKTFTSKVIIFSGTKQAAHRLKI 408
RLSADPS+KRPA LTEEV+RIRR RE NQEAV+LA+CSKTFTS+VIIFSGTKQAAHRLKI
Sbjct: 351 RLSADPSTKRPATLTEEVVRIRRMREVNQEAVLLALCSKTFTSRVIIFSGTKQAAHRLKI 410
Query: 407 LFGLSGFKASELHGNLTQAQRLDALELFRRQEVDFLIATDVAARGLDIIGVQTVINYACP 228
LFGL+GFKA+ELHGNLTQ QRLDALELFR+Q+VDFLIATDVAARGLDIIGVQTVINYACP
Sbjct: 411 LFGLAGFKAAELHGNLTQVQRLDALELFRKQQVDFLIATDVAARGLDIIGVQTVINYACP 470
Query: 227 RDLNSYVHRVGRTARAGREGYAVTFVTDNDRSLLRAIMKRAGSKLKSRTVAEQSINKWAD 48
R+L SYVHRVGRTARAGREGYAVTFVTD DRSLL+AI KRAGSKLKSR VAEQSI KW+
Sbjct: 471 RELTSYVHRVGRTARAGREGYAVTFVTDTDRSLLKAIAKRAGSKLKSRIVAEQSIAKWSQ 530
Query: 47 LIDQMEDQVASILQE 3
+I+QMEDQVA+ILQE
Sbjct: 531 IIEQMEDQVAAILQE 545
>ref|XP_002306942.1| predicted protein [Populus trichocarpa] gi|222856391|gb|EEE93938.1|
predicted protein [Populus trichocarpa]
Length = 744
Score = 715 bits (1846), Expect = 0.0
Identities = 377/494 (76%), Positives = 422/494 (85%), Gaps = 4/494 (0%)
Frame = -1
Query: 1472 KNKQSPWDFSAFTESVTDEHARRSTTSIDYKINKAIQ-HSAISIPKDDDIPE---ESXXX 1305
+ KQSPWDF++++ESV +EHARRSTTSID KI++A Q HS DD E
Sbjct: 43 RQKQSPWDFASYSESVAEEHARRSTTSIDDKISRARQQHSTPLTEHADDASSSDSEPDKQ 102
Query: 1304 XXXXXXXXXXXXXXXXQKKKPFFSSSDGVSFRASSFMELNLSRPLLRACEALGYNKPTPI 1125
+++K FF+ S+G SF A+SFMELNLSRPLLRACEALGY KPTPI
Sbjct: 103 EVYKGEDDEGDEDTNVEERKSFFAPSEGTSFHANSFMELNLSRPLLRACEALGYTKPTPI 162
Query: 1124 QAACIPLAINGRDICASAITGSGKTAAFALPTLERLLCRSKGTPPAVRVLILTPTRELAV 945
QAACIPLA+ GRDIC SAITGSGKTAAFALPTLERLL R K A+RVLILTPTRELAV
Sbjct: 163 QAACIPLALTGRDICGSAITGSGKTAAFALPTLERLLFRPKRIL-AIRVLILTPTRELAV 221
Query: 944 QVHSMVEKLAQFVKDIRCCLVVGGLSTKVQETALRSKPDIVVATPGRIIDHIRNSMSVHL 765
QVHSM+EK+AQF DIRCCLVVGGLSTKVQE +LRS PDIVVATPGR+IDH+RNSMSV L
Sbjct: 222 QVHSMIEKIAQFT-DIRCCLVVGGLSTKVQEASLRSMPDIVVATPGRMIDHLRNSMSVDL 280
Query: 764 EELAVLILDEADRLLELGFSAEIRELIKECPKRRQTMLFSATMTEEVGELIKLSMNKPMR 585
++LAVLILDEADRLLELGF+AEI EL++ CPKRRQTMLFSATMTEEV LIKLS+ KP+R
Sbjct: 281 DDLAVLILDEADRLLELGFNAEIHELVRLCPKRRQTMLFSATMTEEVDMLIKLSLTKPLR 340
Query: 584 LSADPSSKRPAKLTEEVIRIRRAREGNQEAVVLAICSKTFTSKVIIFSGTKQAAHRLKIL 405
LSADPS+KRPA LTEEV+R+RR RE NQEAV+LA+CSKTFTSK IIFSGTKQAAHRLKIL
Sbjct: 341 LSADPSAKRPAALTEEVLRLRRMREVNQEAVLLALCSKTFTSKAIIFSGTKQAAHRLKIL 400
Query: 404 FGLSGFKASELHGNLTQAQRLDALELFRRQEVDFLIATDVAARGLDIIGVQTVINYACPR 225
FGL+GFKA+ELHGNLTQAQRLDALELFR+QEVDFLIATDVAARGLDIIGVQTVINYACPR
Sbjct: 401 FGLAGFKAAELHGNLTQAQRLDALELFRKQEVDFLIATDVAARGLDIIGVQTVINYACPR 460
Query: 224 DLNSYVHRVGRTARAGREGYAVTFVTDNDRSLLRAIMKRAGSKLKSRTVAEQSINKWADL 45
DL SY+HRVGRTARAGREGYAVTFVTDNDRSLL+AI KRAGSKL+SR VAEQSI KW+ +
Sbjct: 461 DLTSYIHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLRSRIVAEQSIIKWSQM 520
Query: 44 IDQMEDQVASILQE 3
I+ ME+QVA +LQ+
Sbjct: 521 IENMENQVADVLQQ 534
>ref|XP_004165239.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
28-like [Cucumis sativus]
Length = 733
Score = 713 bits (1840), Expect = 0.0
Identities = 370/491 (75%), Positives = 420/491 (85%), Gaps = 4/491 (0%)
Frame = -1
Query: 1463 QSPWDFSAFTESVTDEHARRSTTSIDYKINKAIQH-SAISIPKDDD---IPEESXXXXXX 1296
+SPWDF++++ESV DEHARRSTTS+D+KI+K +++ SA P DD EE
Sbjct: 45 ESPWDFASYSESVADEHARRSTTSVDFKISKLLENRSANFTPTADDDGQSSEEESDRQED 104
Query: 1295 XXXXXXXXXXXXXQKKKPFFSSSDGVSFRASSFMELNLSRPLLRACEALGYNKPTPIQAA 1116
FF+ SDG SF A+SFMELNLSRPL+RACEALGY KPTPIQAA
Sbjct: 105 YRPEDDDDGTSNAGDSTSFFAPSDGASFHANSFMELNLSRPLIRACEALGYAKPTPIQAA 164
Query: 1115 CIPLAINGRDICASAITGSGKTAAFALPTLERLLCRSKGTPPAVRVLILTPTRELAVQVH 936
CIPLA+ GRDIC SAITGSGKTAAF+LPTLERLL R K A+RVLILTP RELA+QVH
Sbjct: 165 CIPLALTGRDICGSAITGSGKTAAFSLPTLERLLYRPK-RDRAIRVLILTPARELAIQVH 223
Query: 935 SMVEKLAQFVKDIRCCLVVGGLSTKVQETALRSKPDIVVATPGRIIDHIRNSMSVHLEEL 756
SM+EKLAQF DIRCCL+VGGLS K QE ALRS PD+VVATPGR+IDH+RNSMSV L++L
Sbjct: 224 SMIEKLAQFT-DIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDL 282
Query: 755 AVLILDEADRLLELGFSAEIRELIKECPKRRQTMLFSATMTEEVGELIKLSMNKPMRLSA 576
AVLILDEADRLLELGFSAEIREL++ CPKRRQTMLFSATMTEEV ELIKLS+ KP+RLSA
Sbjct: 283 AVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSA 342
Query: 575 DPSSKRPAKLTEEVIRIRRAREGNQEAVVLAICSKTFTSKVIIFSGTKQAAHRLKILFGL 396
DP++KRP LTEEV+R+RR RE NQEAV+L++CSKTFTSKVI+FSGTKQAAHRLKILFGL
Sbjct: 343 DPATKRPKTLTEEVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGL 402
Query: 395 SGFKASELHGNLTQAQRLDALELFRRQEVDFLIATDVAARGLDIIGVQTVINYACPRDLN 216
+GFKA+ELHGNLTQ QRLDALELFR+Q+VDFLIATDVAARGLDIIGV+TVIN+ACPRDL
Sbjct: 403 AGFKAAELHGNLTQVQRLDALELFRKQQVDFLIATDVAARGLDIIGVETVINFACPRDLT 462
Query: 215 SYVHRVGRTARAGREGYAVTFVTDNDRSLLRAIMKRAGSKLKSRTVAEQSINKWADLIDQ 36
SYVHRVGRTARAGREGYAVTFVTDNDRSLL+AI KRAGSKLKSR VAEQSI KW+++I+Q
Sbjct: 463 SYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIKKWSEIIEQ 522
Query: 35 MEDQVASILQE 3
MEDQV +IL+E
Sbjct: 523 MEDQVTAILRE 533
>ref|XP_004147787.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 28-like [Cucumis
sativus]
Length = 733
Score = 713 bits (1840), Expect = 0.0
Identities = 370/491 (75%), Positives = 420/491 (85%), Gaps = 4/491 (0%)
Frame = -1
Query: 1463 QSPWDFSAFTESVTDEHARRSTTSIDYKINKAIQH-SAISIPKDDD---IPEESXXXXXX 1296
+SPWDF++++ESV DEHARRSTTS+D+KI+K +++ SA P DD EE
Sbjct: 45 ESPWDFASYSESVADEHARRSTTSVDFKISKLLENRSANFTPTADDDGQSSEEESDRQED 104
Query: 1295 XXXXXXXXXXXXXQKKKPFFSSSDGVSFRASSFMELNLSRPLLRACEALGYNKPTPIQAA 1116
FF+ SDG SF A+SFMELNLSRPL+RACEALGY KPTPIQAA
Sbjct: 105 YRPEDDDDGTSNAGDSTSFFAPSDGASFHANSFMELNLSRPLIRACEALGYAKPTPIQAA 164
Query: 1115 CIPLAINGRDICASAITGSGKTAAFALPTLERLLCRSKGTPPAVRVLILTPTRELAVQVH 936
CIPLA+ GRDIC SAITGSGKTAAF+LPTLERLL R K A+RVLILTP RELA+QVH
Sbjct: 165 CIPLALTGRDICGSAITGSGKTAAFSLPTLERLLYRPK-RDRAIRVLILTPARELAIQVH 223
Query: 935 SMVEKLAQFVKDIRCCLVVGGLSTKVQETALRSKPDIVVATPGRIIDHIRNSMSVHLEEL 756
SM+EKLAQF DIRCCL+VGGLS K QE ALRS PD+VVATPGR+IDH+RNSMSV L++L
Sbjct: 224 SMIEKLAQFT-DIRCCLIVGGLSRKEQEAALRSMPDVVVATPGRMIDHLRNSMSVDLDDL 282
Query: 755 AVLILDEADRLLELGFSAEIRELIKECPKRRQTMLFSATMTEEVGELIKLSMNKPMRLSA 576
AVLILDEADRLLELGFSAEIREL++ CPKRRQTMLFSATMTEEV ELIKLS+ KP+RLSA
Sbjct: 283 AVLILDEADRLLELGFSAEIRELVRLCPKRRQTMLFSATMTEEVNELIKLSLTKPLRLSA 342
Query: 575 DPSSKRPAKLTEEVIRIRRAREGNQEAVVLAICSKTFTSKVIIFSGTKQAAHRLKILFGL 396
DP++KRP LTEEV+R+RR RE NQEAV+L++CSKTFTSKVI+FSGTKQAAHRLKILFGL
Sbjct: 343 DPATKRPKTLTEEVVRLRRMREVNQEAVLLSLCSKTFTSKVIVFSGTKQAAHRLKILFGL 402
Query: 395 SGFKASELHGNLTQAQRLDALELFRRQEVDFLIATDVAARGLDIIGVQTVINYACPRDLN 216
+GFKA+ELHGNLTQ QRLDALELFR+Q+VDFLIATDVAARGLDIIGV+TVIN+ACPRDL
Sbjct: 403 AGFKAAELHGNLTQVQRLDALELFRKQQVDFLIATDVAARGLDIIGVETVINFACPRDLT 462
Query: 215 SYVHRVGRTARAGREGYAVTFVTDNDRSLLRAIMKRAGSKLKSRTVAEQSINKWADLIDQ 36
SYVHRVGRTARAGREGYAVTFVTDNDRSLL+AI KRAGSKLKSR VAEQSI KW+++I+Q
Sbjct: 463 SYVHRVGRTARAGREGYAVTFVTDNDRSLLKAIAKRAGSKLKSRIVAEQSIKKWSEIIEQ 522
Query: 35 MEDQVASILQE 3
MEDQV +IL+E
Sbjct: 523 MEDQVTAILRE 533