BLASTX nr result

ID: Bupleurum21_contig00000951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000951
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002520430.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...    58   7e-07
ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    57   2e-06

>ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|222850533|gb|EEE88080.1|
           predicted protein [Populus trichocarpa]
          Length = 552

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/78 (42%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
 Frame = -2

Query: 202 ACSRHPSQPITGFCPLCLHDRLSGLQXXXXXXXXXXXSRPKLRRSKSVS----------- 56
           +C RHPS+PITGFC  CL +RL+G+               +LRRSKS S           
Sbjct: 16  SCHRHPSKPITGFCASCLRERLAGIDPDTHQETPVTHLAAELRRSKSYSSTTTRNNPNNN 75

Query: 55  -ISHCEASSEPRRHSCDV 5
             S    +SEPRR SCDV
Sbjct: 76  NASTTATTSEPRRKSCDV 93


>ref|XP_002520430.1| conserved hypothetical protein [Ricinus communis]
           gi|223540272|gb|EEF41843.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/81 (40%), Positives = 40/81 (49%), Gaps = 15/81 (18%)
 Frame = -2

Query: 199 CSRHPSQPITGFCPLCLHDRLSGLQXXXXXXXXXXXSRPKLRRSKSVSISH--------- 47
           C RHP++PITGFC  CL +RL+G+               +LRRSKS S S          
Sbjct: 16  CHRHPTRPITGFCASCLRERLAGIDPDTHQETPITHLAAELRRSKSYSCSSNPNNNASST 75

Query: 46  ------CEASSEPRRHSCDVR 2
                   AS +PRR SCDVR
Sbjct: 76  TSTSTTNTASDQPRRKSCDVR 96


>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 544

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
 Frame = -2

Query: 199 CSRHPSQPITGFCPLCLHDRLSGLQXXXXXXXXXXXSRPKLRRSKSVSISHCEASS---- 32
           C RHPS P+TGFC  CL +RL+G+              P+LRR+KS S    +A S    
Sbjct: 11  CHRHPSTPVTGFCASCLRERLAGID-------SSSAESPELRRTKSFSGRTTDAPSSSAA 63

Query: 31  -EPRRHSCDVR 2
            EPRR SC+VR
Sbjct: 64  PEPRRRSCEVR 74


>ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|222847087|gb|EEE84634.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/83 (39%), Positives = 41/83 (49%), Gaps = 17/83 (20%)
 Frame = -2

Query: 202 ACSRHPSQPITGFCPLCLHDRLSGLQXXXXXXXXXXXSRPKLRRSKSVS----------- 56
           +C+RHPS+PITGFC  CL +RL+G+               +LRRSKS S           
Sbjct: 16  SCNRHPSKPITGFCASCLRERLAGIDPDTHQETPVTHLAAELRRSKSYSSTTKNNPNNHN 75

Query: 55  ------ISHCEASSEPRRHSCDV 5
                  S    +SEPRR SCDV
Sbjct: 76  ASSTSTSSTTATTSEPRRKSCDV 98


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
 Frame = -2

Query: 199 CSRHPSQPITGFCPLCLHDRLSGLQXXXXXXXXXXXSR--PKLRRSKSVSISHCEA---- 38
           C RHPS+P+TGFC  CL +RL+G+            +    +LRRSKS S + CEA    
Sbjct: 15  CHRHPSKPVTGFCASCLRERLAGIDPDTQHESPVQNNHSSAELRRSKSHSAAKCEAGGIG 74

Query: 37  -SSEPRRHSCDVR 2
            S    R SCDVR
Sbjct: 75  QSEVQHRKSCDVR 87


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