BLASTX nr result
ID: Bupleurum21_contig00000948
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000948
(2060 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] 238 3e-70
dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica G... 130 2e-43
ref|XP_003563352.1| PREDICTED: rRNA 2'-O-methyltransferase fibri... 130 3e-43
dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Grou... 129 4e-43
ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibri... 130 4e-43
>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
Length = 475
Score = 238 bits (606), Expect(2) = 3e-70
Identities = 146/299 (48%), Positives = 188/299 (62%), Gaps = 3/299 (1%)
Frame = +2
Query: 302 FLFEFSLGYALFDARELNKYPGYFTTFKIADKYLNSN--PFTLRAFYPFSSPGDALVQMK 475
F E + GYALF AR +N ++ A++Y+N + PF L+A+ PFSS G+AL+QM
Sbjct: 70 FFVECATGYALFLARGINDID--MNKYQPAEEYINRSDTPFELKAYLPFSSLGEALLQMN 127
Query: 476 AICNSIVTKELKSFLVDNIPEPGSGYEVAVSNVRLARNIGLTARRSAIGGQIIDHVMRGL 655
AI NS VT+ L F+ N P + + ++ L I R S + VMRGL
Sbjct: 128 AISNSSVTEMLIKFIQKNFEPPFHRHVLTTADPVLGEKIVNNVRLSDHSSLLTLSVMRGL 187
Query: 656 RVKIDKLIVGLQPGDLKMAQINLARSYRRQ-ICACKKSSMVQRTFHTVTADKVVVEPHKF 832
R KIDKLI GLQPG+L AQ LA Y+ Q S V + + ++V+V PH+F
Sbjct: 188 REKIDKLI-GLQPGELDKAQRQLAHLYKDQKRTILDTKSPVPVSSSSFLQEQVMVVPHRF 246
Query: 833 EGLFIAKGLGKKNFICTKNLVPGKVLYGDQLISVQNEDDRTEVEYRVWNPHVSKLAAAAL 1012
EG F AK GKKN +CT+NLVPG+ LYG++LI VQNED TEVEYRV +P SKL AA L
Sbjct: 247 EGFFNAK--GKKNILCTRNLVPGEALYGEKLIHVQNEDG-TEVEYRVCDPRRSKLGAAIL 303
Query: 1013 GGLTNIWVKPGSHVLYLGDLYLGDVCGITVLQLSDLVGLDGLVYVIGLSDAVANTVEER 1189
GG+TNIW+KPGS V +Y+G VCG+TV LSD+VGLDGLVYV+G SD V + +R
Sbjct: 304 GGVTNIWIKPGSRV-----MYVGKVCGVTVSDLSDIVGLDGLVYVVGNSDDVTHVEGKR 357
Score = 56.2 bits (134), Expect(2) = 3e-70
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 13/110 (11%)
Frame = +1
Query: 1270 YRMVIGMVDVILGDV-------------VYPDPSWQVSYIARYALLHLKTGGHYLISTRA 1410
YRMV+GMVD + G++ VY D + V+ + Y LKTGGHY+I T+A
Sbjct: 373 YRMVLGMVDAVFGEIDHPLGEIYRLPTKVYRDGRFIVNNVHFY----LKTGGHYMICTKA 428
Query: 1411 KNINVTSQAKDPFADHEKLPFDVRMEFETNELVMLEPIGGRHAMAVGGYR 1560
N+N S+ F+ D+ EF+ + V L+ + G + + +GGYR
Sbjct: 429 DNMN--SKGHIIFSSG-----DINREFKLLQTVPLDLVEGAYFIDIGGYR 471
>dbj|BAH01533.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630379|gb|EEE62511.1| hypothetical protein
OsJ_17309 [Oryza sativa Japonica Group]
Length = 309
Score = 130 bits (328), Expect(2) = 2e-43
Identities = 69/118 (58%), Positives = 86/118 (72%)
Frame = +2
Query: 806 KVVVEPHKFEGLFIAKGLGKKNFICTKNLVPGKVLYGDQLISVQNEDDRTEVEYRVWNPH 985
KVVV PHK +G+FIAK K++ +CTKN+VPG+ +YG++ ISVQNED T+VEYRVWNP
Sbjct: 70 KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRISVQNEDG-TKVEYRVWNPF 126
Query: 986 VSKLAAAALGGLTNIWVKPGSHVLYLGDLYLGDVCGITVLQLSDLVGLDGLVYVIGLS 1159
SKLAAA LGG+ NIW+ PG+ V LYLG G TV +SD+VG GLVY + S
Sbjct: 127 RSKLAAAVLGGVDNIWIAPGTRV-----LYLGGASGTTVSHVSDIVGPTGLVYAVEFS 179
Score = 73.9 bits (180), Expect(2) = 2e-43
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 1270 YRMVIGMVDVILGDVVYPDPSWQVSYIARYALLHLKTGGHYLISTRAKNINVTSQAKDPF 1449
YRM++GMVDVI DV PD Q +A A LK GGH++IS +A I+ T A+ F
Sbjct: 209 YRMLVGMVDVIFSDVAQPD---QARILALNASYFLKNGGHFVISIKANCIDSTMPAEAVF 265
Query: 1450 ADH-EKLPFDVRMEFETNELVMLEPIGGRHAMAVGGYRSVK 1569
A EKL D +F+ +E V LEP HA VGGYR K
Sbjct: 266 ASEVEKLKAD---QFKPSEQVTLEPFERDHACVVGGYRMPK 303
>ref|XP_003563352.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
[Brachypodium distachyon]
Length = 302
Score = 130 bits (326), Expect(2) = 3e-43
Identities = 68/118 (57%), Positives = 86/118 (72%)
Frame = +2
Query: 806 KVVVEPHKFEGLFIAKGLGKKNFICTKNLVPGKVLYGDQLISVQNEDDRTEVEYRVWNPH 985
KVVV PHK +G+FIAK K++ +CTKN+VPG+ +YG++ +SVQNED T+VEYRVWNP
Sbjct: 64 KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRVSVQNEDG-TKVEYRVWNPF 120
Query: 986 VSKLAAAALGGLTNIWVKPGSHVLYLGDLYLGDVCGITVLQLSDLVGLDGLVYVIGLS 1159
SKLAAA LGG+ NIW+ PG+ V LYLG G TV +SD+VG GLVY + S
Sbjct: 121 RSKLAAAVLGGVDNIWIAPGTRV-----LYLGAASGTTVSHVSDIVGPTGLVYAVEFS 173
Score = 73.9 bits (180), Expect(2) = 3e-43
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 1270 YRMVIGMVDVILGDVVYPDPSWQVSYIARYALLHLKTGGHYLISTRAKNINVTSQAKDPF 1449
YRM++GMVDVI DV PD Q +A A LK GGH++IS +A I+ T A+ F
Sbjct: 203 YRMLVGMVDVIFSDVAQPD---QARILALNASYFLKNGGHFVISIKANCIDSTMPAEAVF 259
Query: 1450 ADH-EKLPFDVRMEFETNELVMLEPIGGRHAMAVGGYRSVK 1569
A EKL D +F+ +E V LEP HA VGGYR K
Sbjct: 260 ASEVEKLKAD---QFKPSEQVTLEPFERDHACVVGGYRMPK 297
>dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Group]
gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza
sativa Japonica Group] gi|125541665|gb|EAY88060.1|
hypothetical protein OsI_09490 [Oryza sativa Indica
Group] gi|125584186|gb|EAZ25117.1| hypothetical protein
OsJ_08915 [Oryza sativa Japonica Group]
Length = 306
Score = 129 bits (325), Expect(2) = 4e-43
Identities = 69/118 (58%), Positives = 85/118 (72%)
Frame = +2
Query: 806 KVVVEPHKFEGLFIAKGLGKKNFICTKNLVPGKVLYGDQLISVQNEDDRTEVEYRVWNPH 985
KVVV PHK G+FIAK K++ +CTKN+VPG+ +YG++ ISVQNED T+VEYRVWNP
Sbjct: 67 KVVVVPHKHNGVFIAKA--KEDALCTKNMVPGESVYGEKRISVQNEDG-TKVEYRVWNPF 123
Query: 986 VSKLAAAALGGLTNIWVKPGSHVLYLGDLYLGDVCGITVLQLSDLVGLDGLVYVIGLS 1159
SKLAAA LGG+ NIW+ PG+ V LYLG G TV +SD+VG GLVY + S
Sbjct: 124 RSKLAAAVLGGVDNIWIAPGTRV-----LYLGAASGTTVSHVSDIVGPTGLVYAVEFS 176
Score = 73.9 bits (180), Expect(2) = 4e-43
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 1270 YRMVIGMVDVILGDVVYPDPSWQVSYIARYALLHLKTGGHYLISTRAKNINVTSQAKDPF 1449
YRM++GMVDVI DV PD Q +A A LK GGH++IS +A I+ T A+ F
Sbjct: 206 YRMLVGMVDVIFSDVAQPD---QARILALNASYFLKNGGHFVISIKANCIDSTMPAEAVF 262
Query: 1450 ADH-EKLPFDVRMEFETNELVMLEPIGGRHAMAVGGYRSVK 1569
A EKL D +F+ +E V LEP HA VGGYR K
Sbjct: 263 ASEVEKLKAD---QFKPSEQVTLEPFERDHACVVGGYRMPK 300
>ref|XP_003570421.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 1-like
[Brachypodium distachyon]
Length = 302
Score = 130 bits (326), Expect(2) = 4e-43
Identities = 68/118 (57%), Positives = 86/118 (72%)
Frame = +2
Query: 806 KVVVEPHKFEGLFIAKGLGKKNFICTKNLVPGKVLYGDQLISVQNEDDRTEVEYRVWNPH 985
KVVV PHK +G+FIAK K++ +CTKN+VPG+ +YG++ +SVQNED T+VEYRVWNP
Sbjct: 64 KVVVVPHKHDGVFIAKA--KEDALCTKNMVPGESVYGEKRVSVQNEDG-TKVEYRVWNPF 120
Query: 986 VSKLAAAALGGLTNIWVKPGSHVLYLGDLYLGDVCGITVLQLSDLVGLDGLVYVIGLS 1159
SKLAAA LGG+ NIW+ PG+ V LYLG G TV +SD+VG GLVY + S
Sbjct: 121 RSKLAAAVLGGVDNIWIAPGTRV-----LYLGAASGTTVSHVSDIVGPTGLVYAVEFS 173
Score = 73.6 bits (179), Expect(2) = 4e-43
Identities = 47/101 (46%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +1
Query: 1270 YRMVIGMVDVILGDVVYPDPSWQVSYIARYALLHLKTGGHYLISTRAKNINVTSQAKDPF 1449
YRM++GMVDVI DV PD Q +A A LK GGH++IS +A I+ T A+ F
Sbjct: 203 YRMLVGMVDVIFSDVAQPD---QARILALNASYFLKNGGHFVISIKANCIDSTMPAEAVF 259
Query: 1450 ADH-EKLPFDVRMEFETNELVMLEPIGGRHAMAVGGYRSVK 1569
A EKL D +F+ +E V LEP HA VGGYR K
Sbjct: 260 ASEVEKLKAD---QFKPSEQVTLEPFERDHACVVGGYRVPK 297