BLASTX nr result
ID: Bupleurum21_contig00000945
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00000945 (257 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] 88 8e-16 gb|AAC32120.1| probable fibrillarin [Picea mariana] 71 1e-10 gb|ABK26802.1| unknown [Picea sitchensis] 71 1e-10 ref|XP_001754804.1| predicted protein [Physcomitrella patens sub... 70 1e-10 ref|XP_001762373.1| predicted protein [Physcomitrella patens sub... 70 1e-10 >dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense] Length = 475 Score = 87.8 bits (216), Expect = 8e-16 Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 3/72 (4%) Frame = -2 Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVIGS---VANTVE 86 SKL AA+ G+TNIW+KPGS V+Y+G VCG+TV LSD+VG DGLVYV+G+ V + Sbjct: 296 SKLGAAILGGVTNIWIKPGSRVMYVGKVCGVTVSDLSDIVGLDGLVYVVGNSDDVTHVEG 355 Query: 85 ERSNVVTLPENN 50 +R NVVT+ EN+ Sbjct: 356 KRPNVVTIIEND 367 >gb|AAC32120.1| probable fibrillarin [Picea mariana] Length = 249 Score = 70.9 bits (172), Expect = 1e-10 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 7/78 (8%) Frame = -2 Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98 SKLAAA+ G+ NIW+KPG+HVLYLG G TV +SD+VG G+VY + + Sbjct: 65 SKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEMSHRSGRDLV 124 Query: 97 NTVEERSNVVTLPENNNF 44 N ++R+NV+ + E+ + Sbjct: 125 NMAKKRTNVIPIIEDARY 142 >gb|ABK26802.1| unknown [Picea sitchensis] Length = 312 Score = 70.9 bits (172), Expect = 1e-10 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 7/78 (8%) Frame = -2 Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98 SKLAAA+ G+ NIW+KPG+HVLYLG G TV +SD+VG G+VY + + Sbjct: 128 SKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEMSHRSGRDLV 187 Query: 97 NTVEERSNVVTLPENNNF 44 N ++R+NV+ + E+ + Sbjct: 188 NMAKKRTNVIPIIEDARY 205 >ref|XP_001754804.1| predicted protein [Physcomitrella patens subsp. patens] gi|162693908|gb|EDQ80258.1| predicted protein [Physcomitrella patens subsp. patens] Length = 261 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 7/75 (9%) Frame = -2 Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98 SKLAAA+ G+ NIW+KPG+HVLYLG G TV +SD+VG G+VY + + Sbjct: 78 SKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLV 137 Query: 97 NTVEERSNVVTLPEN 53 N ++R+NV+ + E+ Sbjct: 138 NMAKKRTNVIPIIED 152 >ref|XP_001762373.1| predicted protein [Physcomitrella patens subsp. patens] gi|162686451|gb|EDQ72840.1| predicted protein [Physcomitrella patens subsp. patens] Length = 271 Score = 70.5 bits (171), Expect = 1e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 7/75 (9%) Frame = -2 Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98 SKLAAA+ G+ NIW+KPG+HVLYLG G TV +SD+VG G+VY + + Sbjct: 88 SKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLV 147 Query: 97 NTVEERSNVVTLPEN 53 N ++R+NV+ + E+ Sbjct: 148 NMAKKRTNVIPIIED 162