BLASTX nr result

ID: Bupleurum21_contig00000945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000945
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]      88   8e-16
gb|AAC32120.1| probable fibrillarin [Picea mariana]                    71   1e-10
gb|ABK26802.1| unknown [Picea sitchensis]                              71   1e-10
ref|XP_001754804.1| predicted protein [Physcomitrella patens sub...    70   1e-10
ref|XP_001762373.1| predicted protein [Physcomitrella patens sub...    70   1e-10

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 3/72 (4%)
 Frame = -2

Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVIGS---VANTVE 86
           SKL AA+  G+TNIW+KPGS V+Y+G VCG+TV  LSD+VG DGLVYV+G+   V +   
Sbjct: 296 SKLGAAILGGVTNIWIKPGSRVMYVGKVCGVTVSDLSDIVGLDGLVYVVGNSDDVTHVEG 355

Query: 85  ERSNVVTLPENN 50
           +R NVVT+ EN+
Sbjct: 356 KRPNVVTIIEND 367


>gb|AAC32120.1| probable fibrillarin [Picea mariana]
          Length = 249

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
 Frame = -2

Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98
           SKLAAA+  G+ NIW+KPG+HVLYLG   G TV  +SD+VG  G+VY +         + 
Sbjct: 65  SKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEMSHRSGRDLV 124

Query: 97  NTVEERSNVVTLPENNNF 44
           N  ++R+NV+ + E+  +
Sbjct: 125 NMAKKRTNVIPIIEDARY 142


>gb|ABK26802.1| unknown [Picea sitchensis]
          Length = 312

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
 Frame = -2

Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98
           SKLAAA+  G+ NIW+KPG+HVLYLG   G TV  +SD+VG  G+VY +         + 
Sbjct: 128 SKLAAAILGGVDNIWIKPGTHVLYLGAASGTTVSHVSDIVGPTGIVYAVEMSHRSGRDLV 187

Query: 97  NTVEERSNVVTLPENNNF 44
           N  ++R+NV+ + E+  +
Sbjct: 188 NMAKKRTNVIPIIEDARY 205


>ref|XP_001754804.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162693908|gb|EDQ80258.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 261

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
 Frame = -2

Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98
           SKLAAA+  G+ NIW+KPG+HVLYLG   G TV  +SD+VG  G+VY +         + 
Sbjct: 78  SKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLV 137

Query: 97  NTVEERSNVVTLPEN 53
           N  ++R+NV+ + E+
Sbjct: 138 NMAKKRTNVIPIIED 152


>ref|XP_001762373.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162686451|gb|EDQ72840.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 271

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 7/75 (9%)
 Frame = -2

Query: 256 SKLAAAVQSGLTNIWVKPGSHVLYLGNVCGITVLQLSDLVGSDGLVYVI-------GSVA 98
           SKLAAA+  G+ NIW+KPG+HVLYLG   G TV  +SD+VG  G+VY +         + 
Sbjct: 88  SKLAAAILGGVDNIWIKPGAHVLYLGAASGTTVSHVSDVVGPSGIVYAVEFSHRSGRDLV 147

Query: 97  NTVEERSNVVTLPEN 53
           N  ++R+NV+ + E+
Sbjct: 148 NMAKKRTNVIPIIED 162


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