BLASTX nr result

ID: Bupleurum21_contig00000898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000898
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511952.1| Thylakoid membrane phosphoprotein 14 kDa, ch...    82   6e-14
ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
gb|ABK95729.1| unknown [Populus trichocarpa]                           80   2e-13
gb|AFK45713.1| unknown [Medicago truncatula]                           74   9e-12
gb|ACJ83933.1| unknown [Medicago truncatula]                           74   9e-12

>ref|XP_002511952.1| Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor,
           putative [Ricinus communis] gi|223549132|gb|EEF50621.1|
           Thylakoid membrane phosphoprotein 14 kDa, chloroplast
           precursor, putative [Ricinus communis]
          Length = 167

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/91 (47%), Positives = 60/91 (65%)
 Frame = +3

Query: 12  THSSSLAYLPPRISTSPFPISLSKVSSVSRRYTQFQIKATSEDSSPADGGELLTDLKEKW 191
           T  S+L YLPPR+S++    S+ +VS+ SRR +  QI+A+SE+S+P D GEL TDLK +W
Sbjct: 29  TRCSALPYLPPRLSSNSLRPSIKQVSA-SRRVSLLQIRASSEESAPVDAGELFTDLKARW 87

Query: 192 DSVENKSTXXXXXXXXXXXXXXSATLVGAIN 284
           D++ENKST              S+ +VGAIN
Sbjct: 88  DALENKSTVVLYGGGAIVAVWLSSIVVGAIN 118


>ref|XP_002320843.1| predicted protein [Populus trichocarpa] gi|222861616|gb|EEE99158.1|
           predicted protein [Populus trichocarpa]
          Length = 151

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = +3

Query: 12  THSSSLAYLPPRISTSP--FPIS-LSKVSSVSRRYTQFQIKATSEDSSPADGGELLTDLK 182
           T   +L YLPPR S+S   FPI  +S  +S SRR+  FQ +A+S + SP D  E+ TDLK
Sbjct: 9   TRCYALPYLPPRSSSSSQSFPIKQVSLTASESRRFAPFQTRASSSEESPVDANEIFTDLK 68

Query: 183 EKWDSVENKSTXXXXXXXXXXXXXXSATLVGAIN 284
           EKWD+VENKST              S+ L+GA+N
Sbjct: 69  EKWDAVENKSTVIIYGGGAVVAVWLSSILIGAVN 102


>gb|ABK95729.1| unknown [Populus trichocarpa]
          Length = 164

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/94 (46%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
 Frame = +3

Query: 12  THSSSLAYLPPRISTSP--FPIS-LSKVSSVSRRYTQFQIKATSEDSSPADGGELLTDLK 182
           T   +L YLPPR S+S   FPI  +S  +S SRR+  FQ +A+S + SP D  E+ TDLK
Sbjct: 22  TRCYALPYLPPRSSSSSQSFPIKQVSLTASESRRFAPFQTRASSSEESPVDANEIFTDLK 81

Query: 183 EKWDSVENKSTXXXXXXXXXXXXXXSATLVGAIN 284
           EKWD+VENKST              S+ L+GA+N
Sbjct: 82  EKWDAVENKSTVIIYGGGAVVAVWLSSILIGAVN 115


>gb|AFK45713.1| unknown [Medicago truncatula]
          Length = 161

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +3

Query: 12  THSSSLAYLPPRISTSPFPISLSKVSSVSRRYTQFQIKATS--EDSSPADGGELLTDLKE 185
           T  S+L YLPPR+S+SPF   L +  S SR+++  Q +A+S  E S+  D  EL TDLKE
Sbjct: 23  TRCSALPYLPPRLSSSPF---LKQQLSESRKFSLHQTRASSSEETSTSLDTNELFTDLKE 79

Query: 186 KWDSVENKSTXXXXXXXXXXXXXXSATLVGAIN 284
           KWD++ENKST              S+ LVGAIN
Sbjct: 80  KWDALENKSTVLLYGGGGLVAVWLSSILVGAIN 112


>gb|ACJ83933.1| unknown [Medicago truncatula]
          Length = 161

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
 Frame = +3

Query: 12  THSSSLAYLPPRISTSPFPISLSKVSSVSRRYTQFQIKATS--EDSSPADGGELLTDLKE 185
           T  S+L YLPPR+S+SPF   L +  S SR+++  Q +A+S  E S+  D  EL TDLKE
Sbjct: 23  TRCSALPYLPPRLSSSPF---LKQQLSESRKFSLHQTRASSSEETSTSLDTNELFTDLKE 79

Query: 186 KWDSVENKSTXXXXXXXXXXXXXXSATLVGAIN 284
           KWD++ENKST              S+ LVGAIN
Sbjct: 80  KWDALENKSTVLLYGGGGLVAVWLSSILVGAIN 112


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