BLASTX nr result

ID: Bupleurum21_contig00000828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000828
         (483 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002869896.1| PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrat...   187   6e-46
ref|NP_193860.1| oxygen-evolving enhancer protein 3-1 [Arabidops...   187   8e-46
ref|NP_001031687.1| oxygen-evolving enhancer protein 3-1 [Arabid...   187   1e-45
ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Popu...   187   1e-45
ref|XP_002874836.1| photosystem II subunit Q-2 [Arabidopsis lyra...   186   2e-45

>ref|XP_002869896.1| PSBQ/PSBQ-1 [Arabidopsis lyrata subsp. lyrata]
           gi|297315732|gb|EFH46155.1| PSBQ/PSBQ-1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 224

 Score =  187 bits (476), Expect = 6e-46
 Identities = 96/129 (74%), Positives = 105/129 (81%)
 Frame = +1

Query: 46  TENSDEARDFDKPLKERFYLQPLPPTEAAVRAKDSAKDIINVKDLIDKKAWPYVQNDLRS 225
           T+NSD+ARDF   LK+RFYLQPLPPTEAA RAK+SAKDIINVK LI+KKAWPYVQNDLRS
Sbjct: 96  TDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIEKKAWPYVQNDLRS 155

Query: 226 KATYLRYDLNTIISAKPKDEKTSLKELTGKLFQVIDELDYAAKTKSTPKXXXXXXXXXXX 405
           KA+YLRYDLNTIIS+KPKDEK SLKELT KLF  ID LDYAAK KS  +           
Sbjct: 156 KASYLRYDLNTIISSKPKDEKKSLKELTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSA 215

Query: 406 LNDVLAKLG 432
           LN+VLAKLG
Sbjct: 216 LNEVLAKLG 224


>ref|NP_193860.1| oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana]
           gi|2911085|emb|CAA17547.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|3402748|emb|CAA20194.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|7268925|emb|CAB79128.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|15215600|gb|AAK91345.1| AT4g21280/F7J7_220
           [Arabidopsis thaliana] gi|20334896|gb|AAM16204.1|
           AT4g21280/F7J7_220 [Arabidopsis thaliana]
           gi|21593902|gb|AAM65869.1| photosystem II
           oxygen-evolving complex protein 3-like [Arabidopsis
           thaliana] gi|332659035|gb|AEE84435.1| oxygen-evolving
           enhancer protein 3-1 [Arabidopsis thaliana]
          Length = 223

 Score =  187 bits (475), Expect = 8e-46
 Identities = 98/144 (68%), Positives = 108/144 (75%)
 Frame = +1

Query: 1   IKVXXXXXXXXXXXXTENSDEARDFDKPLKERFYLQPLPPTEAAVRAKDSAKDIINVKDL 180
           IKV            T+NSD+ARDF   LK+RFYLQPLPPTEAA RAK+SAKDIINVK L
Sbjct: 80  IKVGPPPAPSGGLPGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPL 139

Query: 181 IDKKAWPYVQNDLRSKATYLRYDLNTIISAKPKDEKTSLKELTGKLFQVIDELDYAAKTK 360
           ID+KAWPYVQNDLRSKA+YLRYDLNTIIS+KPKDEK SLK+LT KLF  ID LDYAAK K
Sbjct: 140 IDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKK 199

Query: 361 STPKXXXXXXXXXXXLNDVLAKLG 432
           S  +           LN+VLAKLG
Sbjct: 200 SPSQAEKYYAETVSALNEVLAKLG 223


>ref|NP_001031687.1| oxygen-evolving enhancer protein 3-1 [Arabidopsis thaliana]
           gi|193806375|sp|Q9XFT3.3|PSBQ1_ARATH RecName:
           Full=Oxygen-evolving enhancer protein 3-1,
           chloroplastic; Short=OEE3; AltName: Full=16 kDa subunit
           of oxygen evolving system of photosystem II; AltName:
           Full=OEC 16 kDa subunit; Flags: Precursor
           gi|332659036|gb|AEE84436.1| oxygen-evolving enhancer
           protein 3-1 [Arabidopsis thaliana]
          Length = 224

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/129 (73%), Positives = 105/129 (81%)
 Frame = +1

Query: 46  TENSDEARDFDKPLKERFYLQPLPPTEAAVRAKDSAKDIINVKDLIDKKAWPYVQNDLRS 225
           T+NSD+ARDF   LK+RFYLQPLPPTEAA RAK+SAKDIINVK LID+KAWPYVQNDLRS
Sbjct: 96  TDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRS 155

Query: 226 KATYLRYDLNTIISAKPKDEKTSLKELTGKLFQVIDELDYAAKTKSTPKXXXXXXXXXXX 405
           KA+YLRYDLNTIIS+KPKDEK SLK+LT KLF  ID LDYAAK KS  +           
Sbjct: 156 KASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSA 215

Query: 406 LNDVLAKLG 432
           LN+VLAKLG
Sbjct: 216 LNEVLAKLG 224


>ref|XP_002305643.1| hypothetical protein POPTRDRAFT_831063 [Populus trichocarpa]
           gi|118486762|gb|ABK95216.1| unknown [Populus
           trichocarpa] gi|222848607|gb|EEE86154.1| hypothetical
           protein POPTRDRAFT_831063 [Populus trichocarpa]
          Length = 234

 Score =  187 bits (474), Expect = 1e-45
 Identities = 95/129 (73%), Positives = 104/129 (80%)
 Frame = +1

Query: 46  TENSDEARDFDKPLKERFYLQPLPPTEAAVRAKDSAKDIINVKDLIDKKAWPYVQNDLRS 225
           T NSDEARDFD PLK+RF+LQPLPP EAAVRAK+SAKDI+ VK LID+KAWPYVQNDLR 
Sbjct: 106 TLNSDEARDFDLPLKQRFFLQPLPPAEAAVRAKESAKDILGVKSLIDQKAWPYVQNDLRL 165

Query: 226 KATYLRYDLNTIISAKPKDEKTSLKELTGKLFQVIDELDYAAKTKSTPKXXXXXXXXXXX 405
           KA YLR+DLNT+ISAK KDEK SLKELTGKLF  I  LD+AAK KSTP+           
Sbjct: 166 KAGYLRFDLNTVISAKSKDEKKSLKELTGKLFDTISNLDHAAKIKSTPEAEKYYAQTVSS 225

Query: 406 LNDVLAKLG 432
           LNDVLAKLG
Sbjct: 226 LNDVLAKLG 234


>ref|XP_002874836.1| photosystem II subunit Q-2 [Arabidopsis lyrata subsp. lyrata]
           gi|297320673|gb|EFH51095.1| photosystem II subunit Q-2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 230

 Score =  186 bits (472), Expect = 2e-45
 Identities = 94/144 (65%), Positives = 110/144 (76%)
 Frame = +1

Query: 1   IKVXXXXXXXXXXXXTENSDEARDFDKPLKERFYLQPLPPTEAAVRAKDSAKDIINVKDL 180
           IKV            T+NSD+ARDF   LK+RFY+QPL PTEAA RAK+SAK+IINVK L
Sbjct: 87  IKVGPPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKESAKEIINVKSL 146

Query: 181 IDKKAWPYVQNDLRSKATYLRYDLNTIISAKPKDEKTSLKELTGKLFQVIDELDYAAKTK 360
           IDKKAWPYVQNDLR +A+YLRYDLNT+ISAKPK+EK +LKELTGKLF+ ID LDYAA++K
Sbjct: 147 IDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKKNLKELTGKLFETIDNLDYAARSK 206

Query: 361 STPKXXXXXXXXXXXLNDVLAKLG 432
           S+P            LN+VLAKLG
Sbjct: 207 SSPDAEKYYSETVSSLNNVLAKLG 230


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