BLASTX nr result

ID: Bupleurum21_contig00000811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000811
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602545.1| Actin [Medicago truncatula] gi|355491593|gb|...   202   3e-50
ref|XP_004156708.1| PREDICTED: actin-97-like [Cucumis sativus]        200   9e-50
ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus] gi...   200   1e-49
gb|ADV04491.1| beta-actin [Camellia sinensis]                         200   1e-49
gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL278...   200   1e-49

>ref|XP_003602545.1| Actin [Medicago truncatula] gi|355491593|gb|AES72796.1| Actin
           [Medicago truncatula]
          Length = 382

 Score =  202 bits (513), Expect = 3e-50
 Identities = 108/146 (73%), Positives = 108/146 (73%), Gaps = 3/146 (2%)
 Frame = +2

Query: 77  KMADAEDIQPLVCDNGTGMVKAGFAGDDAPRVVFPSIVGRPRHTGVMVGMGQKDAYVGDE 256
           KMADAEDIQPLVCDNGTGMVKAGFAGDDAPR VFPSIVGRPRHTGVMVGMGQKDAYVGDE
Sbjct: 5   KMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE 64

Query: 257 AQSKRG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVLLTEAPLNPKANRE 427
           AQSKRG                                     HPVLLTEAPLNPKANRE
Sbjct: 65  AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 124

Query: 428 KMTQIMFETFNVPAMYVAIQAVLSLY 505
           KMTQIMFETFNVPAMYVAIQAVLSLY
Sbjct: 125 KMTQIMFETFNVPAMYVAIQAVLSLY 150


>ref|XP_004156708.1| PREDICTED: actin-97-like [Cucumis sativus]
          Length = 382

 Score =  200 bits (509), Expect = 9e-50
 Identities = 107/146 (73%), Positives = 107/146 (73%), Gaps = 3/146 (2%)
 Frame = +2

Query: 77  KMADAEDIQPLVCDNGTGMVKAGFAGDDAPRVVFPSIVGRPRHTGVMVGMGQKDAYVGDE 256
           KMADAEDIQPLVCDNGTGMVKAGFAGDDAPR VFPSIVGRPRHTGVMVGMGQKDAYVGDE
Sbjct: 5   KMADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDE 64

Query: 257 AQSKRG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVLLTEAPLNPKANRE 427
           AQSKRG                                     HPVLLTEAPLNPKANRE
Sbjct: 65  AQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 124

Query: 428 KMTQIMFETFNVPAMYVAIQAVLSLY 505
           KMTQIMFETFN PAMYVAIQAVLSLY
Sbjct: 125 KMTQIMFETFNTPAMYVAIQAVLSLY 150


>ref|XP_004147353.1| PREDICTED: actin-7-like [Cucumis sativus]
           gi|449461823|ref|XP_004148641.1| PREDICTED: actin-7-like
           [Cucumis sativus] gi|449532903|ref|XP_004173417.1|
           PREDICTED: actin-7-like [Cucumis sativus]
          Length = 377

 Score =  200 bits (508), Expect = 1e-49
 Identities = 107/145 (73%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
 Frame = +2

Query: 80  MADAEDIQPLVCDNGTGMVKAGFAGDDAPRVVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 259
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPR VFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 260 QSKRG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVLLTEAPLNPKANREK 430
           QSKRG                                     HPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 431 MTQIMFETFNVPAMYVAIQAVLSLY 505
           MTQIMFETFNVPAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLY 145


>gb|ADV04491.1| beta-actin [Camellia sinensis]
          Length = 377

 Score =  200 bits (508), Expect = 1e-49
 Identities = 107/145 (73%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
 Frame = +2

Query: 80  MADAEDIQPLVCDNGTGMVKAGFAGDDAPRVVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 259
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPR VFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 260 QSKRG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVLLTEAPLNPKANREK 430
           QSKRG                                     HPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 431 MTQIMFETFNVPAMYVAIQAVLSLY 505
           MTQIMFETFNVPAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLY 145


>gb|AAP73457.1| actin [Gossypium hirsutum] gi|219563046|gb|ACL27885.1| actin
           [Helianthus annuus] gi|219563048|gb|ACL27886.1| actin
           [Helianthus annuus] gi|306922316|dbj|BAJ17659.1| actin
           [Gynura bicolor]
          Length = 377

 Score =  200 bits (508), Expect = 1e-49
 Identities = 107/145 (73%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
 Frame = +2

Query: 80  MADAEDIQPLVCDNGTGMVKAGFAGDDAPRVVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 259
           MADAEDIQPLVCDNGTGMVKAGFAGDDAPR VFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1   MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60

Query: 260 QSKRG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPVLLTEAPLNPKANREK 430
           QSKRG                                     HPVLLTEAPLNPKANREK
Sbjct: 61  QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120

Query: 431 MTQIMFETFNVPAMYVAIQAVLSLY 505
           MTQIMFETFNVPAMYVAIQAVLSLY
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLY 145


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