BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000809
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirs...   118   6e-25
gb|ABK94286.1| unknown [Populus trichocarpa]                          111   5e-23
ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group] g...   110   9e-23
gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]       110   1e-22
ref|XP_002306429.1| high mobility group family [Populus trichoca...   110   1e-22

>gb|ADD74180.2| high mobility group box 3 protein [Gossypium hirsutum]
          Length = 139

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/94 (61%), Positives = 70/94 (74%)
 Frame = -1

Query: 283 NKPKRPPSAFFVFMEGFRKQFKEKNPXXXXXXXXXXXXGDRWRSMSDDDKAEFVTIAEQR 104
           NKPKRP SAFFVFME FRKQ+KE NP            G++W+SM+D +KA +V  AE+R
Sbjct: 36  NKPKRPASAFFVFMEEFRKQYKEANPDNRSVSAVGKAGGEKWKSMTDAEKAPYVQKAEKR 95

Query: 103 KKDYEKKMKAYENKLAGGNDEDESDKSKSEVNDE 2
           K +Y KKM+AY  KLAGG ++DESDKSKSEVNDE
Sbjct: 96  KSEYNKKMQAYNLKLAGGGNDDESDKSKSEVNDE 129


>gb|ABK94286.1| unknown [Populus trichocarpa]
          Length = 144

 Score =  111 bits (278), Expect = 5e-23
 Identities = 57/94 (60%), Positives = 67/94 (71%)
 Frame = -1

Query: 283 NKPKRPPSAFFVFMEGFRKQFKEKNPXXXXXXXXXXXXGDRWRSMSDDDKAEFVTIAEQR 104
           NKPKRP SAFFVFME FRKQ+KE +P            GD+W+S+S+ +KA F   AE+R
Sbjct: 37  NKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPFAAKAEKR 96

Query: 103 KKDYEKKMKAYENKLAGGNDEDESDKSKSEVNDE 2
           K +Y K M AY  +LAGGND DESDKSKSEVNDE
Sbjct: 97  KFEYNKDMAAYNKRLAGGND-DESDKSKSEVNDE 129


>ref|NP_001063869.1| Os09g0551600 [Oryza sativa Japonica Group]
           gi|50726318|dbj|BAD33893.1| putative HMGd1 [Oryza sativa
           Japonica Group] gi|113632102|dbj|BAF25783.1|
           Os09g0551600 [Oryza sativa Japonica Group]
           gi|213959176|gb|ACJ54922.1| HMG type
           nucleosome/chromatin assembly factor [Oryza sativa
           Japonica Group] gi|215694881|dbj|BAG90072.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 127

 Score =  110 bits (276), Expect = 9e-23
 Identities = 58/95 (61%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = -1

Query: 283 NKPKRPPSAFFVFMEGFRKQFKEKNPXXXXXXXXXXXXGDRWRSMSDDDKAEFVTIAEQR 104
           NKPKRPPSAFFVFME FRK +KEK+P            GD+W+SM+D DKA FVT AE+ 
Sbjct: 26  NKPKRPPSAFFVFMEQFRKDYKEKHPNVKQVSVIGKAGGDKWKSMTDADKAPFVTKAEKL 85

Query: 103 KKDYEKKMKAYENKLAGG-NDEDESDKSKSEVNDE 2
           K +Y KK+ AY NK AGG     +SDKSKSEVNDE
Sbjct: 86  KAEYTKKIDAYNNKQAGGPATSGDSDKSKSEVNDE 120


>gb|AAC50019.1| high mobility group protein 2 HMG2 [Ipomoea nil]
          Length = 146

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/95 (56%), Positives = 69/95 (72%), Gaps = 1/95 (1%)
 Frame = -1

Query: 283 NKPKRPPSAFFVFMEGFRKQFKEKNPXXXXXXXXXXXXGDRWRSMSDDDKAEFVTIAEQR 104
           NKPKRPPSAFFVFME FRK +KEK+P            GD+W+ ++D +KA F+  AE+R
Sbjct: 34  NKPKRPPSAFFVFMEDFRKTYKEKHPNNKSVAAVGKAGGDKWKQLTDAEKAPFIAKAEKR 93

Query: 103 KKDYEKKMKAYENKLAG-GNDEDESDKSKSEVNDE 2
           K++YEK M+AY  K AG   DE+ESDKS+SEVND+
Sbjct: 94  KQEYEKSMQAYNRKQAGEAADEEESDKSRSEVNDD 128


>ref|XP_002306429.1| high mobility group family [Populus trichocarpa]
           gi|222855878|gb|EEE93425.1| high mobility group family
           [Populus trichocarpa]
          Length = 144

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/94 (59%), Positives = 67/94 (71%)
 Frame = -1

Query: 283 NKPKRPPSAFFVFMEGFRKQFKEKNPXXXXXXXXXXXXGDRWRSMSDDDKAEFVTIAEQR 104
           NKPKRP SAFFVFME FRKQ+KE +P            GD+W+S+S+ +KA +   AE+R
Sbjct: 37  NKPKRPASAFFVFMEDFRKQYKESHPNNKSVAAVGKAGGDKWKSLSEAEKAPYAAKAEKR 96

Query: 103 KKDYEKKMKAYENKLAGGNDEDESDKSKSEVNDE 2
           K +Y K M AY  +LAGGND DESDKSKSEVNDE
Sbjct: 97  KFEYNKDMAAYNKRLAGGND-DESDKSKSEVNDE 129