BLASTX nr result

ID: Bupleurum21_contig00000792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000792
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vi...   295   1e-77
ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicu...   279   9e-73
ref|XP_002511100.1| Auxin response factor, putative [Ricinus com...   277   2e-72
gb|AEV43357.1| auxin-response factor [Citrus sinensis]                261   1e-67
gb|ADN33857.1| auxin response factor-like protein [Cucumis melo ...   257   3e-66

>ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
            gi|297734502|emb|CBI15749.3| unnamed protein product
            [Vitis vinifera]
          Length = 862

 Score =  295 bits (755), Expect = 1e-77
 Identities = 161/279 (57%), Positives = 195/279 (69%), Gaps = 7/279 (2%)
 Frame = -3

Query: 838  DASYWTPGSAKYGNYNRH-NMHPAGQRDDHQQGNWLMPPPLPAYSHLPAHSREQIPKNMS 662
            D  Y T G A++G ++ +  +H  G R + QQGNWLMPPP  ++    AHSRE +PK + 
Sbjct: 579  DMPYQTRGDARFGGFSEYPTLH--GHRVELQQGNWLMPPPAQSHFENFAHSRELMPKPIL 636

Query: 661  PQHQ-GVKSNDGNCKLFGIPLISNPVTMEPDMSHRNTVIEASQVGAQLNESPT-YESDQR 488
             Q Q  VK  DGNCKLFGIPLI NPV  EP MS+R+   E +     L+ +P+ ++SDQ+
Sbjct: 637  VQKQEAVKPKDGNCKLFGIPLIGNPVISEPAMSYRSMTNEPA---GHLHLAPSAFDSDQK 693

Query: 487  SDKLKMA---DKLVATSDQEKTIQNQ-PLPSDGQGKVQGSLTRSCTKVHKQGVALGRSVD 320
            S++ K A   D  +A S+QEK  Q   PL  D QGKVQ   TRSCTKVHKQG+ALGRSVD
Sbjct: 694  SEQSKGAKSTDNPLAVSEQEKPCQTSLPLSRDVQGKVQSVSTRSCTKVHKQGIALGRSVD 753

Query: 319  LTKFSDYDGLIAELDHLFEFNGELKARGKDWLVVYTDDEGDMMLVGDDPWQEFCGMVRKI 140
            LTKF++YD LIAELD LFEF GEL A  K+WL+VYTDDEGDMMLVGDDPWQEFCGMVRKI
Sbjct: 754  LTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKI 813

Query: 139  FIYTREDVQRMEPKKLNPKGEESSLAAEGTHVGEAKNLP 23
            +IYTRE+VQRM P  LN K +++   AEG    E K  P
Sbjct: 814  YIYTREEVQRMNPGTLNSKNDDNPSVAEGMDAKEVKRQP 852


>ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
            gi|85069279|gb|ABC69711.1| auxin response factor 2
            [Solanum lycopersicum]
          Length = 846

 Score =  279 bits (713), Expect = 9e-73
 Identities = 155/286 (54%), Positives = 189/286 (66%), Gaps = 6/286 (2%)
 Frame = -3

Query: 841  GDASYWTPGSAKYGNYNRHNMHPAGQRDDHQQGNWLMPPPLPAYSHLPAHSREQIPK-NM 665
            GD  Y   G A+Y  Y   ++ P G R  +QQG+W+MP P+  Y  L +HSRE + K ++
Sbjct: 559  GDTPYQMRGDARYSGYGEFSVLP-GHRVANQQGSWIMPQPVSPYMQLSSHSREMMHKPSV 617

Query: 664  SPQHQGVKSNDGNCKLFGIPLISNPVTMEPDMSHRNTVIEASQ--VGAQLNESPTYESDQ 491
              Q + VK  +GN KLFGIPL SN  T    M   + +  AS   +G   ++S   +SDQ
Sbjct: 618  VKQPEAVKPKEGNYKLFGIPLTSNVCTDAVMMRKSSLIDPASDMNIGIHPHQSLATDSDQ 677

Query: 490  RSDKLK--MADKLVATSDQEKTIQNQPLPS-DGQGKVQGSLTRSCTKVHKQGVALGRSVD 320
            RS++ K    D  VA +D +K      L + D  GK   S TRSCTKVHKQG ALGRSVD
Sbjct: 678  RSEQSKGSKVDDGVAANDHDKQFHTFHLAARDKDGKGHSSSTRSCTKVHKQGTALGRSVD 737

Query: 319  LTKFSDYDGLIAELDHLFEFNGELKARGKDWLVVYTDDEGDMMLVGDDPWQEFCGMVRKI 140
            L KF++YD LIAELD LF+FNGELKAR K WLVVYTDDEGDMMLVGDDPWQEFCGMVRKI
Sbjct: 738  LAKFNNYDELIAELDQLFDFNGELKARSKSWLVVYTDDEGDMMLVGDDPWQEFCGMVRKI 797

Query: 139  FIYTREDVQRMEPKKLNPKGEESSLAAEGTHVGEAKNLPSSVPEDS 2
            FIYT+E+VQRM P  LN KGE++S  AEG+   E KNL   +P +S
Sbjct: 798  FIYTKEEVQRMNPGTLNSKGEDTSSVAEGSDAKEVKNL--QLPSES 841


>ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
            gi|223550215|gb|EEF51702.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 844

 Score =  277 bits (709), Expect = 2e-72
 Identities = 145/250 (58%), Positives = 175/250 (70%), Gaps = 1/250 (0%)
 Frame = -3

Query: 769  GQRDDHQQGNWLMPPPLPAYSHLPAHSREQIPKNMSPQHQGVKSNDGNCKLFGIPLISNP 590
            G R D   GNWLMPPP P++    AH+RE + K +  +H   KS DGNCKLFGIPL SNP
Sbjct: 587  GHRVDQSHGNWLMPPPPPSHFDNLAHAREPVSKPLQ-EHDIGKSTDGNCKLFGIPLFSNP 645

Query: 589  VTMEPDMSHRNTVIEASQVGAQLNESPTYESDQRSDKLKMADKLVATSDQEKTIQNQPLP 410
            V  EP  SHRN V E +    Q ++    ESDQRS++ +++ K+   ++ EK  Q+  L 
Sbjct: 646  VAPEPATSHRNMVNEPTTAHPQSHQPRALESDQRSEQPRVS-KMADDNEHEKQFQSGHLH 704

Query: 409  S-DGQGKVQGSLTRSCTKVHKQGVALGRSVDLTKFSDYDGLIAELDHLFEFNGELKARGK 233
            + D QGK Q   TRSCTKVHKQG+ALGRSVDL KF++YD LIAELD LFEF GEL +  K
Sbjct: 705  TRDIQGKTQTGSTRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEFGGELISPKK 764

Query: 232  DWLVVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTREDVQRMEPKKLNPKGEESSLAAEG 53
            +WL+VYTDDEGDMMLVGDDPWQEF GMVRKIFIYTRE+VQ+M P  LN KG+E  L  +G
Sbjct: 765  NWLIVYTDDEGDMMLVGDDPWQEFVGMVRKIFIYTREEVQKMNPGTLNSKGDEHLLDVDG 824

Query: 52   THVGEAKNLP 23
                E K +P
Sbjct: 825  VDAKEVKCVP 834


>gb|AEV43357.1| auxin-response factor [Citrus sinensis]
          Length = 846

 Score =  261 bits (668), Expect = 1e-67
 Identities = 147/275 (53%), Positives = 181/275 (65%), Gaps = 5/275 (1%)
 Frame = -3

Query: 841  GDASYWTPGSAKYGNYNRHNMHPAGQRDDHQQGNWLMPPPLPAYSHLPAHSREQIPKNMS 662
            GD +Y   G+ +YG +  + M   G R +H  GNWLMPP  P+     AHSRE +PK+  
Sbjct: 565  GDVNYQVRGNVRYGGFGDYPMLN-GNRVEHSHGNWLMPPLPPSNFENSAHSRELMPKSAM 623

Query: 661  PQHQGV-KSNDGNCKLFGIPLISNPVTMEPDMSHRNTVIEASQVGAQLNESPTYESDQRS 485
             Q Q   KS D  CKLFGIPL SN V  EP +SHRNT+ E +  G    +   +ESDQ+S
Sbjct: 624  VQDQEAGKSKD--CKLFGIPLFSNHVMPEPVVSHRNTMNEPA--GNLDQQFRAFESDQKS 679

Query: 484  D---KLKMADKLVATSDQEKTIQ-NQPLPSDGQGKVQGSLTRSCTKVHKQGVALGRSVDL 317
            +     K+AD     ++ EK  Q +Q    D + K Q   TRSCTKV KQG+ALGRSVDL
Sbjct: 680  EHSKSSKLADDNQVFNEHEKPSQPSQTHTKDVRSKTQCGSTRSCTKVQKQGIALGRSVDL 739

Query: 316  TKFSDYDGLIAELDHLFEFNGELKARGKDWLVVYTDDEGDMMLVGDDPWQEFCGMVRKIF 137
            +KF++YD LIAELD LFEF+GEL A  K+WL+VYTDDEGDMMLVGDDPWQEFCGMVRKIF
Sbjct: 740  SKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIF 799

Query: 136  IYTREDVQRMEPKKLNPKGEESSLAAEGTHVGEAK 32
            IYT+E+V +M    L+ KGE+S +  EG    E K
Sbjct: 800  IYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVK 834


>gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
          Length = 840

 Score =  257 bits (657), Expect = 3e-66
 Identities = 145/287 (50%), Positives = 188/287 (65%), Gaps = 7/287 (2%)
 Frame = -3

Query: 841  GDASYWTPGSAKYGNYNRHNMHPAGQRDDHQQGNWLMPPPLPAYSHLPAHSREQIPKNMS 662
            GD SY   G+A +  +  H++     R +   GNWLMPPP   + + P HS E + K M 
Sbjct: 565  GDLSYQVRGNATFNGFGDHSISHC-PRTEQPHGNWLMPPPSSHFDY-PIHSSELMSKPML 622

Query: 661  PQHQGV-KSNDGNCKLFGIPLISNPVTMEPDMSHRNTVIEASQVGAQLNESPTYESDQRS 485
             Q+Q + K  DGNCKLFGI L+ NP   +P   +RN + EA  + + +++  + ES  +S
Sbjct: 623  FQNQDILKPKDGNCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHSNVHQIHSIESGLKS 682

Query: 484  DK---LKMADKLVATSDQEKTIQNQPLPSDGQGKVQGSLTRSCTKVHKQGVALGRSVDLT 314
            +     K+ADK VA S+ +K  Q          K QG+  RSCTKVHKQG+ALGRSVDL+
Sbjct: 683  ELPRGSKLADKSVAISEADKLQQTC--------KSQGTSARSCTKVHKQGIALGRSVDLS 734

Query: 313  KFSDYDGLIAELDHLFEFNGELKARGKDWLVVYTDDEGDMMLVGDDPWQEFCGMVRKIFI 134
            +F++YD L+AELD LFEF GEL A  K+WL+VYTDDEGDMMLVGDDPW+EFCGMVRKIFI
Sbjct: 735  RFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDPWREFCGMVRKIFI 794

Query: 133  YTREDVQRMEPKKLNPKGEESSLAAEGTHVGEAKN--LPS-SVPEDS 2
            YTRE+VQ+M P  LN KG+E+  + EG    E K+  +PS S PE S
Sbjct: 795  YTREEVQKMNPGSLNLKGDENP-SVEGEEAKETKSQAVPSMSAPESS 840


Top