BLASTX nr result

ID: Bupleurum21_contig00000746 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000746
         (1355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containi...   558   e-157
ref|XP_002517613.1| pentatricopeptide repeat-containing protein,...   547   e-153
ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containi...   523   e-146
dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]                         523   e-146
ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|2...   512   e-142

>ref|XP_002267057.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Vitis vinifera]
          Length = 405

 Score =  558 bits (1439), Expect = e-157
 Identities = 269/361 (74%), Positives = 309/361 (85%)
 Frame = +1

Query: 184  LEPPALIKLKSERDPEKLFHLFKANARNRLVVENRFAFEDTVSRLAGARKFNYIEDLLEQ 363
            LE PAL+KLK+ERDPE+LF LFKANA NRLVVENRFAFEDTVSRLAGA +F+YIE LLE 
Sbjct: 41   LEEPALVKLKAERDPERLFQLFKANAHNRLVVENRFAFEDTVSRLAGAGRFDYIEHLLEH 100

Query: 364  QKGLPQGRREGFVVRIIMLYGKAGMYKHAVNTFYDMHLYGCKRTVKSFNAALLVLTQTRD 543
            QK LPQGRREGF+VRIIMLYGKAGM K AV+TFYDMHL+GC+RTVKSFNAAL VLTQ+ D
Sbjct: 101  QKTLPQGRREGFIVRIIMLYGKAGMIKQAVDTFYDMHLFGCQRTVKSFNAALKVLTQSYD 160

Query: 544  LNAILSFLSDVPFRFGLNLDAYSFNIIIKAFCDMGLCDKACLVMVEMEKLGVQPDVITYT 723
            L AI  FL DVPF+FG+ LD +S NI+IKA CDM + +KA +VM+EMEK GV PDV+TYT
Sbjct: 161  LEAIDLFLRDVPFKFGIELDVFSVNIVIKALCDMDILEKAYMVMIEMEKAGVNPDVVTYT 220

Query: 724  TLISAFYKISGWEIGNGLWNLMVKRGCLPNLTTFNVRIQHLVNGRRVWQANSLMGMMRYI 903
            TLISAFYK + WE+GNGLWNLMV +GCLPNL TFNVRIQ+LVN RR WQANSLMGMM Y+
Sbjct: 221  TLISAFYKSNRWEVGNGLWNLMVMKGCLPNLATFNVRIQYLVNRRRAWQANSLMGMMEYL 280

Query: 904  GIRPDEVTYNLVIKGFCVAGYIDMAKRVYSALHDEGYKPNAKIYQTMIHYLCKAGDFDLA 1083
            GI PDEVTYNLVIKGFC AGY++MAK+VYSALH +GYKPN KIYQTMIHYLCK G+FD+A
Sbjct: 281  GITPDEVTYNLVIKGFCQAGYLEMAKKVYSALHGKGYKPNVKIYQTMIHYLCKGGEFDMA 340

Query: 1084 YTMCKDCMNKYRSLNVETIHMLLEGLKRKGKIQKVEFIITLAQNRIPPFPAQQLDVMKSI 1263
            YTMCKDCMN+  SLNV+TI+ LLEGLK  G+I K + I+ LA+ R+P F   QL V +S+
Sbjct: 341  YTMCKDCMNRNWSLNVDTIYKLLEGLKGNGEIDKAKVILRLARKRVPSFSKNQLGVFESV 400

Query: 1264 L 1266
            L
Sbjct: 401  L 401


>ref|XP_002517613.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543245|gb|EEF44777.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 400

 Score =  547 bits (1410), Expect = e-153
 Identities = 266/364 (73%), Positives = 311/364 (85%)
 Frame = +1

Query: 184  LEPPALIKLKSERDPEKLFHLFKANARNRLVVENRFAFEDTVSRLAGARKFNYIEDLLEQ 363
            LE PAL KLK+ERDPEKLF+LFKANARNRLV+ENRFAFEDT+SRLAGAR+F+YIE LLE 
Sbjct: 37   LEEPALAKLKAERDPEKLFNLFKANARNRLVIENRFAFEDTISRLAGARRFDYIEHLLEH 96

Query: 364  QKGLPQGRREGFVVRIIMLYGKAGMYKHAVNTFYDMHLYGCKRTVKSFNAALLVLTQTRD 543
            QK LPQGRREGF++RIIMLYGKAGM KHAV+TF DMH+YGCKRTVKSFNAAL VLT+T D
Sbjct: 97   QKTLPQGRREGFIIRIIMLYGKAGMTKHAVDTFNDMHMYGCKRTVKSFNAALKVLTETCD 156

Query: 544  LNAILSFLSDVPFRFGLNLDAYSFNIIIKAFCDMGLCDKACLVMVEMEKLGVQPDVITYT 723
            L AI +FLS+VP +F + LD +S NIIIKAFC M + DKA LVM++ME+LG++PDV+TYT
Sbjct: 157  LEAIKAFLSEVPEKFDIILDIFSVNIIIKAFCKMSILDKAYLVMIQMERLGIRPDVVTYT 216

Query: 724  TLISAFYKISGWEIGNGLWNLMVKRGCLPNLTTFNVRIQHLVNGRRVWQANSLMGMMRYI 903
            TLISAFYK   WEI NGLWNLMV +GCLPNL+TFNVRIQHLVN R+ WQAN +M +M  I
Sbjct: 217  TLISAFYKNDRWEISNGLWNLMVLKGCLPNLSTFNVRIQHLVNIRQSWQANEVMLLMERI 276

Query: 904  GIRPDEVTYNLVIKGFCVAGYIDMAKRVYSALHDEGYKPNAKIYQTMIHYLCKAGDFDLA 1083
            GI PDEVTYNLVIKGF  AGY++MA+RVYSALH +GYKPN KIYQTMIH LCK G+FDLA
Sbjct: 277  GISPDEVTYNLVIKGFGQAGYLEMARRVYSALHGKGYKPNVKIYQTMIHCLCKGGEFDLA 336

Query: 1084 YTMCKDCMNKYRSLNVETIHMLLEGLKRKGKIQKVEFIITLAQNRIPPFPAQQLDVMKSI 1263
            YTMCKDCM K   LNV+TIH LL+GLK+ G++ K + I+TLAQ R+PPF ++QL +  S+
Sbjct: 337  YTMCKDCMKKSWFLNVDTIHTLLDGLKKNGQLDKAKMIVTLAQRRMPPFSSKQLSIFDSL 396

Query: 1264 LLRS 1275
            L RS
Sbjct: 397  LSRS 400


>ref|XP_004152207.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
            gi|449484169|ref|XP_004156805.1| PREDICTED:
            pentatricopeptide repeat-containing protein At1g80150,
            mitochondrial-like [Cucumis sativus]
          Length = 399

 Score =  523 bits (1347), Expect = e-146
 Identities = 255/368 (69%), Positives = 300/368 (81%)
 Frame = +1

Query: 172  HSCNLEPPALIKLKSERDPEKLFHLFKANARNRLVVENRFAFEDTVSRLAGARKFNYIED 351
            +S +LE PAL+KLK+ERDPEKLFHLFKANA NRLV+ENRFAFEDTVSRLAGAR+F+YIE 
Sbjct: 32   NSKSLEEPALVKLKAERDPEKLFHLFKANAHNRLVIENRFAFEDTVSRLAGARRFDYIEH 91

Query: 352  LLEQQKGLPQGRREGFVVRIIMLYGKAGMYKHAVNTFYDMHLYGCKRTVKSFNAALLVLT 531
            LLE QK LPQGRREGF++RIIMLYGKA M KHA++TFYDMHLYGC RTVKSFNA L VL 
Sbjct: 92   LLEHQKTLPQGRREGFIIRIIMLYGKAEMIKHALDTFYDMHLYGCLRTVKSFNAVLKVLM 151

Query: 532  QTRDLNAILSFLSDVPFRFGLNLDAYSFNIIIKAFCDMGLCDKACLVMVEMEKLGVQPDV 711
            ++RDL A+ +FLS+ P +F + LD  S NI++KAFCD G  ++A L+M+EMEKLG++PDV
Sbjct: 152  KSRDLGALEAFLSEAPEKFDIELDIISVNILVKAFCDFGFLNRAYLLMLEMEKLGIKPDV 211

Query: 712  ITYTTLISAFYKISGWEIGNGLWNLMVKRGCLPNLTTFNVRIQHLVNGRRVWQANSLMGM 891
            +TYTTLISA YK    EI NGLWNLMV RGCLPNLTTFNVRIQHL+  RR W AN LM M
Sbjct: 212  VTYTTLISASYKDRQSEISNGLWNLMVLRGCLPNLTTFNVRIQHLIERRRAWDANKLMKM 271

Query: 892  MRYIGIRPDEVTYNLVIKGFCVAGYIDMAKRVYSALHDEGYKPNAKIYQTMIHYLCKAGD 1071
            MR IGI PDEVTYNLVIKGFC AG +DMAKRVYSALH  GYKPN KIYQTMIHYLCK+ D
Sbjct: 272  MRNIGIVPDEVTYNLVIKGFCQAGLLDMAKRVYSALHGSGYKPNVKIYQTMIHYLCKSED 331

Query: 1072 FDLAYTMCKDCMNKYRSLNVETIHMLLEGLKRKGKIQKVEFIITLAQNRIPPFPAQQLDV 1251
            F+LA+T+CKD MNK    N++TIH LL+GL + G+  K + I+ LA+ R+PPF   QL+ 
Sbjct: 332  FNLAHTICKDAMNKNWFPNIDTIHSLLKGLNKMGEAGKAQLILALARKRVPPFSKNQLEA 391

Query: 1252 MKSILLRS 1275
            + + L  S
Sbjct: 392  LNTTLANS 399


>dbj|BAJ53230.1| JHL06P13.10 [Jatropha curcas]
          Length = 399

 Score =  523 bits (1346), Expect = e-146
 Identities = 256/364 (70%), Positives = 300/364 (82%)
 Frame = +1

Query: 184  LEPPALIKLKSERDPEKLFHLFKANARNRLVVENRFAFEDTVSRLAGARKFNYIEDLLEQ 363
            LE PALIKLK+ERDPEKLF+LFKANA+NRLV+ENRFAFEDTVSRLAGAR+F+YIE+LLE 
Sbjct: 36   LEEPALIKLKAERDPEKLFNLFKANAQNRLVIENRFAFEDTVSRLAGARRFHYIENLLEH 95

Query: 364  QKGLPQGRREGFVVRIIMLYGKAGMYKHAVNTFYDMHLYGCKRTVKSFNAALLVLTQTRD 543
            QK LPQGRREGF+VRIIMLY KAGM KHA+NTFYDMHLYGCKRTVKSFNAAL VLT TR+
Sbjct: 96   QKTLPQGRREGFIVRIIMLYAKAGMVKHALNTFYDMHLYGCKRTVKSFNAALKVLTGTRN 155

Query: 544  LNAILSFLSDVPFRFGLNLDAYSFNIIIKAFCDMGLCDKACLVMVEMEKLGVQPDVITYT 723
            + AI  FL + P +F + +D +S NIIIKA C+MG  DKA LVMV+ +K G++ DVITYT
Sbjct: 156  MVAIQDFLCEAPEKFDITMDIFSINIIIKALCEMGYLDKAYLVMVQFQKSGIEADVITYT 215

Query: 724  TLISAFYKISGWEIGNGLWNLMVKRGCLPNLTTFNVRIQHLVNGRRVWQANSLMGMMRYI 903
            TLISA Y+   W IGNGLWNLMV +GC PNL TFNVRIQ+LVN R+ W+AN +M +M+ I
Sbjct: 216  TLISASYRNKLWMIGNGLWNLMVLKGCKPNLATFNVRIQYLVNSRQSWEANDVMRLMQRI 275

Query: 904  GIRPDEVTYNLVIKGFCVAGYIDMAKRVYSALHDEGYKPNAKIYQTMIHYLCKAGDFDLA 1083
            GI PD+VTYNLVIKGFC+AGY++MAKRVYSAL  E YKPN KIYQTMIHYLCK G+FDLA
Sbjct: 276  GIAPDQVTYNLVIKGFCLAGYLEMAKRVYSALQGEVYKPNFKIYQTMIHYLCKGGEFDLA 335

Query: 1084 YTMCKDCMNKYRSLNVETIHMLLEGLKRKGKIQKVEFIITLAQNRIPPFPAQQLDVMKSI 1263
            YTMCKDCM K   L+V+TIH LL GL + G + K + I+TLA+ ++PPF + QL    SI
Sbjct: 336  YTMCKDCMGKGWYLHVDTIHALLNGLMKNGHLGKAKLIVTLAKRKVPPFSSSQLSSFYSI 395

Query: 1264 LLRS 1275
            L  S
Sbjct: 396  LSNS 399


>ref|XP_002303255.1| predicted protein [Populus trichocarpa] gi|222840687|gb|EEE78234.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  512 bits (1318), Expect = e-142
 Identities = 252/364 (69%), Positives = 300/364 (82%)
 Frame = +1

Query: 184  LEPPALIKLKSERDPEKLFHLFKANARNRLVVENRFAFEDTVSRLAGARKFNYIEDLLEQ 363
            LE PAL+KLK+ERDPEKLF+LFKANA NRLVVENRFAFEDTVSRLAGA +F+YIE LLE 
Sbjct: 38   LEEPALVKLKAERDPEKLFNLFKANAENRLVVENRFAFEDTVSRLAGANRFDYIEHLLEH 97

Query: 364  QKGLPQGRREGFVVRIIMLYGKAGMYKHAVNTFYDMHLYGCKRTVKSFNAALLVLTQTRD 543
            QK LPQGRREGF+VRIIMLYGKAGM KHA++TFY+MHL+GCKRTVKS NAAL VLT TRD
Sbjct: 98   QKPLPQGRREGFMVRIIMLYGKAGMIKHAIDTFYNMHLHGCKRTVKSVNAALKVLTGTRD 157

Query: 544  LNAILSFLSDVPFRFGLNLDAYSFNIIIKAFCDMGLCDKACLVMVEMEKLGVQPDVITYT 723
            L AI +F+++ P +F + LD +S NII+KA C+ G  DKA L+MVEMEK GV+PDVITYT
Sbjct: 158  LAAIEAFVNEAPKKFDIELDIFSVNIIVKALCETGNLDKAYLLMVEMEKSGVRPDVITYT 217

Query: 724  TLISAFYKISGWEIGNGLWNLMVKRGCLPNLTTFNVRIQHLVNGRRVWQANSLMGMMRYI 903
            TL+SAFYK +  EIGNGLWNLMV +GCLPNL TFNVRIQ+LVN RR W AN +M +M  I
Sbjct: 218  TLMSAFYKNNRSEIGNGLWNLMVLKGCLPNLATFNVRIQYLVNIRRAWHANDVMRLMLKI 277

Query: 904  GIRPDEVTYNLVIKGFCVAGYIDMAKRVYSALHDEGYKPNAKIYQTMIHYLCKAGDFDLA 1083
            GI PDEVTYNLVIKGF   G ++MAK VY +L  +G+K N K+YQTM+HYLCK G+FDLA
Sbjct: 278  GIVPDEVTYNLVIKGFFQTGKLEMAKMVYFSLRGKGHKFNVKVYQTMVHYLCKGGEFDLA 337

Query: 1084 YTMCKDCMNKYRSLNVETIHMLLEGLKRKGKIQKVEFIITLAQNRIPPFPAQQLDVMKSI 1263
            YTMC+DCM     LNV+TIH LLEGLK+ G++ K + I+TLAQ R+PPFP+  L  ++++
Sbjct: 338  YTMCRDCMRNNWFLNVDTIHTLLEGLKKNGQLNKAKVIVTLAQKRVPPFPSSHLRSLQAV 397

Query: 1264 LLRS 1275
            L RS
Sbjct: 398  LSRS 401


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