BLASTX nr result

ID: Bupleurum21_contig00000732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000732
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus...   188   7e-46
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   187   1e-45
ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloro...   187   2e-45
ref|NP_001236492.1| uncharacterized protein LOC100306286 [Glycin...   186   4e-45
gb|ABB97026.1| unknown [Brassica rapa]                                185   5e-45

>ref|XP_002522724.1| 30S ribosomal protein S10, putative [Ricinus communis]
           gi|223537962|gb|EEF39575.1| 30S ribosomal protein S10,
           putative [Ricinus communis]
          Length = 208

 Score =  188 bits (477), Expect = 7e-46
 Identities = 90/93 (96%), Positives = 92/93 (98%)
 Frame = -1

Query: 281 DSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSP 102
           D+DKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAAR TNAKTMGPVPLPTKKRIYCVLKSP
Sbjct: 102 DADKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSP 161

Query: 101 HVHKDARFHFEIRTHQRLIDILHPTAQTIDSLM 3
           HVHKDARFHFEIRTHQRLIDIL+PTAQTIDSLM
Sbjct: 162 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLM 194


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  187 bits (475), Expect = 1e-45
 Identities = 89/93 (95%), Positives = 93/93 (100%)
 Frame = -1

Query: 281 DSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSP 102
           DSD++APKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRI+CVLKSP
Sbjct: 91  DSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSP 150

Query: 101 HVHKDARFHFEIRTHQRLIDILHPTAQTIDSLM 3
           HVHKDARFHFEIRTHQRLIDIL+PTAQTIDSLM
Sbjct: 151 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLM 183


>ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cucumis
           sativus] gi|449519589|ref|XP_004166817.1| PREDICTED: 30S
           ribosomal protein S10, chloroplastic-like [Cucumis
           sativus]
          Length = 206

 Score =  187 bits (474), Expect = 2e-45
 Identities = 90/93 (96%), Positives = 91/93 (97%)
 Frame = -1

Query: 281 DSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSP 102
           D DKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAAR TNAKTMGPVPLPTKKRIYCVLKSP
Sbjct: 100 DVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSP 159

Query: 101 HVHKDARFHFEIRTHQRLIDILHPTAQTIDSLM 3
           HVHKDARFHFEIRTHQRLIDIL+PTAQTIDSLM
Sbjct: 160 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLM 192


>ref|NP_001236492.1| uncharacterized protein LOC100306286 [Glycine max]
           gi|255628105|gb|ACU14397.1| unknown [Glycine max]
          Length = 207

 Score =  186 bits (471), Expect = 4e-45
 Identities = 88/93 (94%), Positives = 92/93 (98%)
 Frame = -1

Query: 281 DSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSP 102
           D+D +APKQKIRIKLRSYWVPLIEDSCKQI+DAARTTNAKTMGPVPLPTKKRIYCVLKSP
Sbjct: 101 DADTMAPKQKIRIKLRSYWVPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVLKSP 160

Query: 101 HVHKDARFHFEIRTHQRLIDILHPTAQTIDSLM 3
           HVHKDARFHFEIRTHQRLIDIL+PTAQTIDSLM
Sbjct: 161 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLM 193


>gb|ABB97026.1| unknown [Brassica rapa]
          Length = 190

 Score =  185 bits (470), Expect = 5e-45
 Identities = 87/93 (93%), Positives = 92/93 (98%)
 Frame = -1

Query: 281 DSDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSP 102
           D+DK+APKQKIRIKLRSYWVPLIEDSCKQI+DAAR TNAKTMGPVPLPTKKRIYCVLKSP
Sbjct: 84  DADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP 143

Query: 101 HVHKDARFHFEIRTHQRLIDILHPTAQTIDSLM 3
           HVHKDARFHFEIRTHQR+IDIL+PTAQTIDSLM
Sbjct: 144 HVHKDARFHFEIRTHQRMIDILYPTAQTIDSLM 176


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