BLASTX nr result

ID: Bupleurum21_contig00000710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000710
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|2...   136   2e-30
ref|XP_002515036.1| RCC1 and BTB domain-containing protein, puta...   135   3e-30
ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein lig...   134   1e-29
ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein lig...   134   1e-29
emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]   134   1e-29

>ref|XP_002321983.1| predicted protein [Populus trichocarpa] gi|222868979|gb|EEF06110.1|
           predicted protein [Populus trichocarpa]
          Length = 538

 Score =  136 bits (342), Expect = 2e-30
 Identities = 69/88 (78%), Positives = 74/88 (84%)
 Frame = -1

Query: 266 TPQLVKSLENIFVVQAAIGNLFTAVLSREGRVYTFSWGNERKLGHQTEPHDVEPHPLLGA 87
           TPQLV+SL+NIFVVQAAIGN FTAVLSREGRVYTFSWGN+ KLGHQTEP+DV PHPLLGA
Sbjct: 245 TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDGKLGHQTEPNDVVPHPLLGA 304

Query: 86  LENIPVVQIXXXXXXXXXXXCEPSGMSV 3
           LENIPVVQI           C+PSGMSV
Sbjct: 305 LENIPVVQIAAGYCYLLALACQPSGMSV 332


>ref|XP_002515036.1| RCC1 and BTB domain-containing protein, putative [Ricinus communis]
           gi|223546087|gb|EEF47590.1| RCC1 and BTB
           domain-containing protein, putative [Ricinus communis]
          Length = 537

 Score =  135 bits (341), Expect = 3e-30
 Identities = 69/88 (78%), Positives = 74/88 (84%)
 Frame = -1

Query: 266 TPQLVKSLENIFVVQAAIGNLFTAVLSREGRVYTFSWGNERKLGHQTEPHDVEPHPLLGA 87
           TPQLV+SL+NIFVVQAAIGN FTAVLSREGRVYTFSWG++ KLGHQTEP DVEPHPLLGA
Sbjct: 241 TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHQTEPTDVEPHPLLGA 300

Query: 86  LENIPVVQIXXXXXXXXXXXCEPSGMSV 3
           LENIPVVQI           C+PSGMSV
Sbjct: 301 LENIPVVQIAAGYCYLLALACQPSGMSV 328


>ref|XP_003631252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 2
           [Vitis vinifera]
          Length = 526

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = -1

Query: 266 TPQLVKSLENIFVVQAAIGNLFTAVLSREGRVYTFSWGNERKLGHQTEPHDVEPHPLLGA 87
           TPQLV+SL+NIFVVQAAIGN FTAVLSREGRVYTFSWGN+ KLGHQTE +D+EPHPLLGA
Sbjct: 233 TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGA 292

Query: 86  LENIPVVQIXXXXXXXXXXXCEPSGMSV 3
           LENIPVVQI           C+P+GMSV
Sbjct: 293 LENIPVVQIAAGYCYLLALACQPNGMSV 320


>ref|XP_002285332.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 isoform 1
           [Vitis vinifera] gi|296081404|emb|CBI16837.3| unnamed
           protein product [Vitis vinifera]
          Length = 534

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = -1

Query: 266 TPQLVKSLENIFVVQAAIGNLFTAVLSREGRVYTFSWGNERKLGHQTEPHDVEPHPLLGA 87
           TPQLV+SL+NIFVVQAAIGN FTAVLSREGRVYTFSWGN+ KLGHQTE +D+EPHPLLGA
Sbjct: 241 TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGA 300

Query: 86  LENIPVVQIXXXXXXXXXXXCEPSGMSV 3
           LENIPVVQI           C+P+GMSV
Sbjct: 301 LENIPVVQIAAGYCYLLALACQPNGMSV 328


>emb|CAN77314.1| hypothetical protein VITISV_008041 [Vitis vinifera]
          Length = 541

 Score =  134 bits (336), Expect = 1e-29
 Identities = 67/88 (76%), Positives = 74/88 (84%)
 Frame = -1

Query: 266 TPQLVKSLENIFVVQAAIGNLFTAVLSREGRVYTFSWGNERKLGHQTEPHDVEPHPLLGA 87
           TPQLV+SL+NIFVVQAAIGN FTAVLSREGRVYTFSWGN+ KLGHQTE +D+EPHPLLGA
Sbjct: 243 TPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGNDAKLGHQTEANDLEPHPLLGA 302

Query: 86  LENIPVVQIXXXXXXXXXXXCEPSGMSV 3
           LENIPVVQI           C+P+GMSV
Sbjct: 303 LENIPVVQIAAGYCYLLALACQPNGMSV 330


Top