BLASTX nr result
ID: Bupleurum21_contig00000701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00000701
(1836 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi... 587 e-165
ref|XP_002517094.1| pentatricopeptide repeat-containing protein,... 550 e-154
ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containi... 531 e-148
ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containi... 531 e-148
ref|XP_003610755.1| Pentatricopeptide repeat-containing protein ... 511 e-142
>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 587 bits (1513), Expect = e-165
Identities = 287/505 (56%), Positives = 375/505 (74%), Gaps = 2/505 (0%)
Frame = -1
Query: 1554 ESPELPSWVKFAENG-VANISQDDDFVLPSISHWVDEHKILDEKVKEEG-VKRDIADSDI 1381
ESPELP WVKF++N A DDDFV+P +++W + K D + K +G V ++ DSDI
Sbjct: 31 ESPELPDWVKFSQNNNPAGSDSDDDFVIPKLAYWAENQKH-DHRSKVDGYVLKETIDSDI 89
Query: 1380 DKISRVLNNPFDSTGSVIEAXXXXXXXXXXXXXXXXLKRFSNNWIMAFGFFKWAQMQAGF 1201
DKIS +L S +V++A LKRFSN+WI AFGFFKWA+ Q G+
Sbjct: 90 DKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGY 149
Query: 1200 KHSPDSYDMMIDILGKSKKFDLMWEMVEVMDQLEGHITFNTMTKVMRRLAKAGKYKDAIE 1021
+HS +SY+ M+DILGK KKFDLMWE+VE MD+L G+++ TMTKVMRRLA+A ++KDAIE
Sbjct: 150 RHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIE 209
Query: 1020 VFKSMERYQLEKDIAALNVLIDLLVKEKSVELAQDVYTEFRNQIIPNILTFNILLHGWCK 841
F+ MER+ ++KD A+N L+D LVKE SVE A DV+ EF++ I+ N TFN+L+HGWCK
Sbjct: 210 AFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCK 269
Query: 840 VGEIEKARQIMDEMQKSGISPDVISYTSFIEAYCHERDFRNVDAILKEMEEKSCPPNVVS 661
+++ A + M EM++ G PDVISYTS +EAYC E+DFR V+++L EMEEK CPPNVV+
Sbjct: 270 ARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVT 329
Query: 660 YTIIMHARGKAKETDQALAIFETMKKNGCAPDTSFCSSLIYILGKCGRLKDAQEVFEDMP 481
YTI+MHA GK KE +AL ++E MK + C PDTSF SSLIYIL K GRLKDA++VFEDM
Sbjct: 330 YTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMT 389
Query: 480 KRGLIPDVLTYNTMITSACHHLQEENALQLLKKMEENHCSPDVNTYMPLLKMCCRLKRMK 301
K+G IPDVLTYNTMI++AC H QEE+AL+LL KMEE+ C PD+NTY PLLKMCCR RMK
Sbjct: 390 KQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMK 449
Query: 300 MIYFLLSHMLKNDVSVGLNVYLLLIRGLCNRGKLEHACSFFEEAVMRSFVPREGLYNELV 121
++ LL+HM KND+S+ + Y LL+ GLC GKLEHAC FFEE V + VP++ + L+
Sbjct: 450 VLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEMVSKGLVPKDCTHKLLL 509
Query: 120 KKLEEKGMGKAKKRIEELMLLAKEQ 46
K+LE+K M +AK+R+E+LM A++Q
Sbjct: 510 KELEKKSMVEAKERVEKLMSQARQQ 534
>ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223543729|gb|EEF45257.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 549
Score = 550 bits (1416), Expect = e-154
Identities = 269/528 (50%), Positives = 367/528 (69%), Gaps = 9/528 (1%)
Frame = -1
Query: 1602 SNTTLSKEVD---------DSADFTESPELPSWVKFAENGVANISQDDDFVLPSISHWVD 1450
SN +LSK + DS D ESP+LP+W+ + D DFV+PS++ WV+
Sbjct: 22 SNPSLSKSLPIPLTTPHSADSPDSPESPDLPTWL---HSNKKPEFPDGDFVIPSLADWVE 78
Query: 1449 EHKILDEKVKEEGVKRDIADSDIDKISRVLNNPFDSTGSVIEAXXXXXXXXXXXXXXXXL 1270
H + D K + SDID++S +L + T SV++A L
Sbjct: 79 HHNLGDIKEVGNHLLFHAQVSDIDRVSEILKKHYPCTDSVVQALNDCGVNPTNNLISQLL 138
Query: 1269 KRFSNNWIMAFGFFKWAQMQAGFKHSPDSYDMMIDILGKSKKFDLMWEMVEVMDQLEGHI 1090
RF N+W+ A G F WA+ Q G+ H PD YD+M+DILG+ KKF MWE+V+ M+ LEG++
Sbjct: 139 NRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLEGYV 198
Query: 1089 TFNTMTKVMRRLAKAGKYKDAIEVFKSMERYQLEKDIAALNVLIDLLVKEKSVELAQDVY 910
+ TM KVMRRLA+AG ++DA+E F+ +E+ + KDI ALNVL+D LVKE SVE A +
Sbjct: 199 SLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAF 258
Query: 909 TEFRNQIIPNILTFNILLHGWCKVGEIEKARQIMDEMQKSGISPDVISYTSFIEAYCHER 730
EF++ I + +FNILLHG+CK +++ AR+IMDEM K G P+V+SYT FIE YC +
Sbjct: 259 MEFKDSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLK 318
Query: 729 DFRNVDAILKEMEEKSCPPNVVSYTIIMHARGKAKETDQALAIFETMKKNGCAPDTSFCS 550
DFRNV+AI EM+EKSC PNV++YTI MHA GKAK+ ++AL ++E MK N C PD SF S
Sbjct: 319 DFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYS 378
Query: 549 SLIYILGKCGRLKDAQEVFEDMPKRGLIPDVLTYNTMITSACHHLQEENALQLLKKMEEN 370
SLI++L + GRLKDA +VFEDM K+G+ PD+LTYNTMITSAC HL+EENAL+LL++MEE+
Sbjct: 379 SLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEED 438
Query: 369 HCSPDVNTYMPLLKMCCRLKRMKMIYFLLSHMLKNDVSVGLNVYLLLIRGLCNRGKLEHA 190
C PD+ TY PLLKMCCR KR+K++ FLL+HM KN++S+ L Y+LL+ GLC GKLE A
Sbjct: 439 SCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELA 498
Query: 189 CSFFEEAVMRSFVPREGLYNELVKKLEEKGMGKAKKRIEELMLLAKEQ 46
CSFFEE VM+ +PR+ Y LV++LE+ + +AK++I++LM ++Q
Sbjct: 499 CSFFEEMVMKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLMFQTEDQ 546
>ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 531 bits (1367), Expect = e-148
Identities = 256/513 (49%), Positives = 359/513 (69%), Gaps = 2/513 (0%)
Frame = -1
Query: 1578 VDDSADFTESPELPSWVKFAENGVANI--SQDDDFVLPSISHWVDEHKILDEKVKEEGVK 1405
+ S + +ESP+LP W+KF + + S+DD FV+P ++HW++ K+ D +
Sbjct: 99 ITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNNKVVQKKL 158
Query: 1404 RDIADSDIDKISRVLNNPFDSTGSVIEAXXXXXXXXXXXXXXXXLKRFSNNWIMAFGFFK 1225
+ ++++DKIS +L N + S +V EA LKRF N+WI A+G FK
Sbjct: 159 GETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFK 218
Query: 1224 WAQMQAGFKHSPDSYDMMIDILGKSKKFDLMWEMVEVMDQLEGHITFNTMTKVMRRLAKA 1045
WA+ Q ++HSP+SY+ M+DILGK+K F LMWE+V+ M+ L G ++ TM+KV+RRLA+A
Sbjct: 219 WAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARA 278
Query: 1044 GKYKDAIEVFKSMERYQLEKDIAALNVLIDLLVKEKSVELAQDVYTEFRNQIIPNILTFN 865
G++++AI F+++E+Y + D A+NVL+D LVKE SVE A +V+ E + I N+ +FN
Sbjct: 279 GRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFN 338
Query: 864 ILLHGWCKVGEIEKARQIMDEMQKSGISPDVISYTSFIEAYCHERDFRNVDAILKEMEEK 685
+L+HG+CK ++++A +IM E++KSG+ PDVISYT+FIEA+C E+DFRNVD +L +ME K
Sbjct: 339 VLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHK 398
Query: 684 SCPPNVVSYTIIMHARGKAKETDQALAIFETMKKNGCAPDTSFCSSLIYILGKCGRLKDA 505
C PNV+++TIIMHA GKAK+ ++AL ++E MKK GC PD+SF SSLI+ILGK GRL D
Sbjct: 399 GCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDV 458
Query: 504 QEVFEDMPKRGLIPDVLTYNTMITSACHHLQEENALQLLKKMEENHCSPDVNTYMPLLKM 325
+E+ EDM K+G+ PDVLTYNT+I+ AC H QEE AL LL KMEE C PD+ TY PLLKM
Sbjct: 459 KEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKM 518
Query: 324 CCRLKRMKMIYFLLSHMLKNDVSVGLNVYLLLIRGLCNRGKLEHACSFFEEAVMRSFVPR 145
CR KRMK++ FLL HM KNDVS+ Y +L+RGLC GKL ACSFF E + ++ VP+
Sbjct: 519 FCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPK 578
Query: 144 EGLYNELVKKLEEKGMGKAKKRIEELMLLAKEQ 46
+ + L ++LE K M + K IE LM A Q
Sbjct: 579 DSTFKMLKEELERKSMLEEMKIIENLMFCATNQ 611
>ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 531 bits (1367), Expect = e-148
Identities = 256/513 (49%), Positives = 359/513 (69%), Gaps = 2/513 (0%)
Frame = -1
Query: 1578 VDDSADFTESPELPSWVKFAENGVANI--SQDDDFVLPSISHWVDEHKILDEKVKEEGVK 1405
+ S + +ESP+LP W+KF + + S+DD FV+P ++HW++ K+ D +
Sbjct: 76 ITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNNKVVQKKL 135
Query: 1404 RDIADSDIDKISRVLNNPFDSTGSVIEAXXXXXXXXXXXXXXXXLKRFSNNWIMAFGFFK 1225
+ ++++DKIS +L N + S +V EA LKRF N+WI A+G FK
Sbjct: 136 GETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFK 195
Query: 1224 WAQMQAGFKHSPDSYDMMIDILGKSKKFDLMWEMVEVMDQLEGHITFNTMTKVMRRLAKA 1045
WA+ Q ++HSP+SY+ M+DILGK+K F LMWE+V+ M+ L G ++ TM+KV+RRLA+A
Sbjct: 196 WAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARA 255
Query: 1044 GKYKDAIEVFKSMERYQLEKDIAALNVLIDLLVKEKSVELAQDVYTEFRNQIIPNILTFN 865
G++++AI F+++E+Y + D A+NVL+D LVKE SVE A +V+ E + I N+ +FN
Sbjct: 256 GRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSIPFNLASFN 315
Query: 864 ILLHGWCKVGEIEKARQIMDEMQKSGISPDVISYTSFIEAYCHERDFRNVDAILKEMEEK 685
+L+HG+CK ++++A +IM E++KSG+ PDVISYT+FIEA+C E+DFRNVD +L +ME K
Sbjct: 316 VLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHK 375
Query: 684 SCPPNVVSYTIIMHARGKAKETDQALAIFETMKKNGCAPDTSFCSSLIYILGKCGRLKDA 505
C PNV+++TIIMHA GKAK+ ++AL ++E MKK GC PD+SF SSLI+ILGK GRL D
Sbjct: 376 GCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDV 435
Query: 504 QEVFEDMPKRGLIPDVLTYNTMITSACHHLQEENALQLLKKMEENHCSPDVNTYMPLLKM 325
+E+ EDM K+G+ PDVLTYNT+I+ AC H QEE AL LL KMEE C PD+ TY PLLKM
Sbjct: 436 KEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKM 495
Query: 324 CCRLKRMKMIYFLLSHMLKNDVSVGLNVYLLLIRGLCNRGKLEHACSFFEEAVMRSFVPR 145
CR KRMK++ FLL HM KNDVS+ Y +L+RGLC GKL ACSFF E + ++ VP+
Sbjct: 496 FCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKAMVPK 555
Query: 144 EGLYNELVKKLEEKGMGKAKKRIEELMLLAKEQ 46
+ + L ++LE K M + K IE LM A Q
Sbjct: 556 DSTFKMLKEELERKSMLEEMKIIENLMFCATNQ 588
>ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 596
Score = 511 bits (1315), Expect = e-142
Identities = 254/501 (50%), Positives = 349/501 (69%), Gaps = 4/501 (0%)
Frame = -1
Query: 1554 ESPELPSWVKFAENGVANISQDDDFVLPSISHWVDEHKILDEKVK---EEGVKRDIADSD 1384
ESPELP WV F++ + S DDDFV+PS++HWVD IL K K + ++ I D
Sbjct: 88 ESPELPPWVMFSDKPTPSNS-DDDFVIPSLAHWVDS-SILQTKPKLFAKPSLEESIHLED 145
Query: 1383 IDKISRVLNNPFDSTGS-VIEAXXXXXXXXXXXXXXXXLKRFSNNWIMAFGFFKWAQMQA 1207
++KIS L S+ V++A LKRF N+W+ A+GFF WA+ Q
Sbjct: 146 VEKISTFLKEQRHSSHDHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQT 205
Query: 1206 GFKHSPDSYDMMIDILGKSKKFDLMWEMVEVMDQLEGHITFNTMTKVMRRLAKAGKYKDA 1027
+ HSP+ Y++M+DILGK+K+FDLMW++V+ M ++EG++ +TM+KVMRR AKA +++DA
Sbjct: 206 PYVHSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYVCLDTMSKVMRRFAKAQRHEDA 265
Query: 1026 IEVFKSMERYQLEKDIAALNVLIDLLVKEKSVELAQDVYTEFRNQIIPNILTFNILLHGW 847
+E F+ M +Y +EKD AALN L+D LVK +S+E+A +V EF++ + + +FNIL++GW
Sbjct: 266 VEAFRGMGKYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGW 325
Query: 846 CKVGEIEKARQIMDEMQKSGISPDVISYTSFIEAYCHERDFRNVDAILKEMEEKSCPPNV 667
CKV EKAR++M+E ++ G PDV +Y +FIE+YCH++DFR VD +L+EM CPPN
Sbjct: 326 CKVRNFEKARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNA 385
Query: 666 VSYTIIMHARGKAKETDQALAIFETMKKNGCAPDTSFCSSLIYILGKCGRLKDAQEVFED 487
V+YTI++ GKA + +AL +E MKK+G PDT F SSL+YILGK GRLKDA EVF+D
Sbjct: 386 VTYTILLLGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDD 445
Query: 486 MPKRGLIPDVLTYNTMITSACHHLQEENALQLLKKMEENHCSPDVNTYMPLLKMCCRLKR 307
MPK+G++ DV+TYNTMI++AC H +EE AL+LLK+MEE C PD+ TY PLLKMCC+ KR
Sbjct: 446 MPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKR 505
Query: 306 MKMIYFLLSHMLKNDVSVGLNVYLLLIRGLCNRGKLEHACSFFEEAVMRSFVPREGLYNE 127
MK++ FLL HM K+D+ Y LL++ L N GKL AC+FFEE V + F P E
Sbjct: 506 MKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKL 565
Query: 126 LVKKLEEKGMGKAKKRIEELM 64
L +KLE K M K K +IEELM
Sbjct: 566 LTRKLEIKSMLKEKDQIEELM 586