BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000687
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23685.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloro...   179   2e-43
sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   177   7e-43
ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|2...   171   9e-41
gb|ABK95755.1| unknown [Populus trichocarpa]                          171   9e-41

>emb|CBI23685.3| unnamed protein product [Vitis vinifera]
          Length = 118

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/115 (78%), Positives = 100/115 (86%), Gaps = 3/115 (2%)
 Frame = +3

Query: 168 SDLRFVCSQLSGLQISYTHL--PNPI-SAPTKLPFQPIARRICPFTGKKSNKANLVSHSN 338
           SDL FV SQ  G++IS THL  PNPI SAP  LP +P+ARR+CPFTGKK+NKAN VS SN
Sbjct: 3   SDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSN 62

Query: 339 HKTKKLQFVNLQYKRMWWEEGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 503
           HKTKKLQFVNLQYK++WWE G R+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 63  HKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 117


>ref|XP_002285387.1| PREDICTED: 50S ribosomal protein L28, chloroplastic [Vitis
           vinifera]
          Length = 146

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/115 (78%), Positives = 100/115 (86%), Gaps = 3/115 (2%)
 Frame = +3

Query: 168 SDLRFVCSQLSGLQISYTHL--PNPI-SAPTKLPFQPIARRICPFTGKKSNKANLVSHSN 338
           SDL FV SQ  G++IS THL  PNPI SAP  LP +P+ARR+CPFTGKK+NKAN VS SN
Sbjct: 31  SDLAFVTSQFGGIKISCTHLQLPNPIPSAPLTLPLRPVARRVCPFTGKKANKANKVSFSN 90

Query: 339 HKTKKLQFVNLQYKRMWWEEGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 503
           HKTKKLQFVNLQYK++WWE G R+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 91  HKTKKLQFVNLQYKKIWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 145


>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  177 bits (450), Expect = 7e-43
 Identities = 90/115 (78%), Positives = 98/115 (85%), Gaps = 3/115 (2%)
 Frame = +3

Query: 168 SDLRFVCSQLSGLQISYTHLPN---PISAPTKLPFQPIARRICPFTGKKSNKANLVSHSN 338
           S+L FV SQLSGL+IS TH  +   P+S P K   QP+ARRICPFTGKKSN+AN VSHSN
Sbjct: 36  SELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQPVARRICPFTGKKSNRANKVSHSN 95

Query: 339 HKTKKLQFVNLQYKRMWWEEGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 503
           HKTKKLQFVNLQYKR+WWE G R+VKLRLSTKAIKTIEKNGLDAVAKKAGIDL K
Sbjct: 96  HKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSK 150


>ref|XP_002315574.1| predicted protein [Populus trichocarpa] gi|222864614|gb|EEF01745.1|
           predicted protein [Populus trichocarpa]
          Length = 118

 Score =  171 bits (432), Expect = 9e-41
 Identities = 88/115 (76%), Positives = 98/115 (85%), Gaps = 1/115 (0%)
 Frame = +3

Query: 162 SPSDLRFVCSQLSGLQISYTHLPNPISAPTKLPFQP-IARRICPFTGKKSNKANLVSHSN 338
           S S++ FV SQLSG++ISY   P P+SAP     QP IARRICPFTGKK+N+AN VS SN
Sbjct: 4   SVSEIGFVTSQLSGIRISYNP-PKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSN 62

Query: 339 HKTKKLQFVNLQYKRMWWEEGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 503
           HKTKKLQFVNLQYKR+WWE G R+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 63  HKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 117


>gb|ABK95755.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  171 bits (432), Expect = 9e-41
 Identities = 88/115 (76%), Positives = 98/115 (85%), Gaps = 1/115 (0%)
 Frame = +3

Query: 162 SPSDLRFVCSQLSGLQISYTHLPNPISAPTKLPFQP-IARRICPFTGKKSNKANLVSHSN 338
           S S++ FV SQLSG++ISY   P P+SAP     QP IARRICPFTGKK+N+AN VS SN
Sbjct: 36  SVSEIGFVTSQLSGIRISYNP-PKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSN 94

Query: 339 HKTKKLQFVNLQYKRMWWEEGNRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 503
           HKTKKLQFVNLQYKR+WWE G R+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 95  HKTKKLQFVNLQYKRVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149