BLASTX nr result

ID: Bupleurum21_contig00000681 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000681
         (1010 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|2...   330   3e-88
ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|1...   330   3e-88
ref|XP_002510750.1| protein with unknown function [Ricinus commu...   330   4e-88
ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246...   327   3e-87
ref|NP_564128.1| PLATZ transcription factor domain-containing pr...   323   4e-86

>ref|XP_002301890.1| predicted protein [Populus trichocarpa] gi|222843616|gb|EEE81163.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score =  330 bits (847), Expect = 3e-88
 Identities = 166/260 (63%), Positives = 193/260 (74%), Gaps = 5/260 (1%)
 Frame = +3

Query: 174 MVSPMVRMGDNEETCPVWLKPLLKANYFVPCSSHGVAGKSECNMFCLDCMGDAFCSYCLI 353
           MVSP  +M  N +T P WL P+L+A+YF+PC+ HG + KSECNMFCLDCMG+AFCSYCLI
Sbjct: 1   MVSPFGQMR-NHDTGPPWLIPMLRASYFIPCAVHGESNKSECNMFCLDCMGNAFCSYCLI 59

Query: 354 HHKDHHVIQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSARIVFLNERPQPRPGKGVTN 533
           +H+DH V+QIRRSSYHNVVRVNEIQK+IDI+CVQTYIINSA+IVFLNERPQPRPGKGVTN
Sbjct: 60  YHRDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTN 119

Query: 534 TCEVCCRSLLDTFRFCSLGCKLGGINRGDPGLTFTPKFKHG----LHGYESDEPTTPKKI 701
           TCE+CCRSLLD+FRFCSLGCKLGG+ RGDP LTF  K K        G ESDE +TPKKI
Sbjct: 120 TCEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFALKLKQNRDPFFGGSESDESSTPKKI 179

Query: 702 RKGHGFDRYLDA-RVFSSGRIXXXXXXXXXXXXNQGDDQDQSALISPGTPPLSNHRNSGS 878
           R+ H F+R +D   ++SS               + GD  D +  ISP TPPL NHRN   
Sbjct: 180 RRTHAFNRLMDGLSIYSSNN---------DGAESSGD--DAATNISPATPPLFNHRN--- 225

Query: 879 KKGPQHYSHRRKGIPHRAPF 938
                  + RRKGIPHRAPF
Sbjct: 226 -------ARRRKGIPHRAPF 238


>ref|XP_002307009.1| predicted protein [Populus trichocarpa] gi|118489570|gb|ABK96587.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222856458|gb|EEE94005.1| predicted protein [Populus
           trichocarpa]
          Length = 238

 Score =  330 bits (846), Expect = 3e-88
 Identities = 165/260 (63%), Positives = 192/260 (73%), Gaps = 5/260 (1%)
 Frame = +3

Query: 174 MVSPMVRMGDNEETCPVWLKPLLKANYFVPCSSHGVAGKSECNMFCLDCMGDAFCSYCLI 353
           MVS   +MG N +  P WL P+L+A+YF+PC  HG + KSECNMFCLDCMG+AFCSYCLI
Sbjct: 1   MVSSFGQMG-NHDMGPPWLIPMLRASYFIPCGVHGESNKSECNMFCLDCMGNAFCSYCLI 59

Query: 354 HHKDHHVIQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSARIVFLNERPQPRPGKGVTN 533
           +HKDH V+QIRRSSYHNVVRVNEIQK+IDI+CVQTYIINSA+IVFLNERPQPRPGKGVTN
Sbjct: 60  YHKDHRVVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTN 119

Query: 534 TCEVCCRSLLDTFRFCSLGCKLGGINRGDPGLTFTPKFKHG----LHGYESDEPTTPKKI 701
           TCE+CCRSLLD+FRFCSLGCKLGG+ RGDP LTF  K KH       G ESDE +TPKKI
Sbjct: 120 TCEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFAVKLKHNRDPFFGGSESDESSTPKKI 179

Query: 702 RKGHGFDRYLDA-RVFSSGRIXXXXXXXXXXXXNQGDDQDQSALISPGTPPLSNHRNSGS 878
           R+ H F+R ++   ++SS               + GD  D +  ISP TPP+ NHRN   
Sbjct: 180 RRTHAFNRLMEGLSIYSSNN---------DGAESSGD--DAATNISPATPPIFNHRN--- 225

Query: 879 KKGPQHYSHRRKGIPHRAPF 938
                  + RRKGIPHRAPF
Sbjct: 226 -------ARRRKGIPHRAPF 238


>ref|XP_002510750.1| protein with unknown function [Ricinus communis]
           gi|223551451|gb|EEF52937.1| protein with unknown
           function [Ricinus communis]
          Length = 235

 Score =  330 bits (845), Expect = 4e-88
 Identities = 165/260 (63%), Positives = 195/260 (75%), Gaps = 5/260 (1%)
 Frame = +3

Query: 174 MVSPMVRMGDNEETCPVWLKPLLKANYFVPCSSHGVAGKSECNMFCLDCMGDAFCSYCLI 353
           MVSP  +M  + +  P WL+P+L+A+YFVPCS HG + KSECN+FCLDCMG+A CSYCLI
Sbjct: 1   MVSPFGQMV-HHDLGPPWLRPMLRASYFVPCSFHGDSNKSECNLFCLDCMGNALCSYCLI 59

Query: 354 HHKDHHVIQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSARIVFLNERPQPRPGKGVTN 533
           +HKDH ++QIRRSSYHNVVRVNEIQK+IDI+CVQTYIINSA+IVFLNERPQPRPGKGVTN
Sbjct: 60  NHKDHRIVQIRRSSYHNVVRVNEIQKYIDISCVQTYIINSAKIVFLNERPQPRPGKGVTN 119

Query: 534 TCEVCCRSLLDTFRFCSLGCKLGGINRGDPGLTFTPKFKHG----LHGYESDEPTTPKKI 701
           TCE+CCRSLLD+FRFCSLGCKLGG+ RGDP LTFT + KH     L G ESDE +TPKKI
Sbjct: 120 TCEICCRSLLDSFRFCSLGCKLGGMKRGDPDLTFTLRMKHNRDPFLGGSESDESSTPKKI 179

Query: 702 RKGHGFDRYLDA-RVFSSGRIXXXXXXXXXXXXNQGDDQDQSALISPGTPPLSNHRNSGS 878
           RK H F+R +D   ++SS               + GD+   +  ISP TPP+ NHRN   
Sbjct: 180 RKTHAFNRLMDGLSIYSS------------DGHSSGDEATTN--ISPSTPPIYNHRN--- 222

Query: 879 KKGPQHYSHRRKGIPHRAPF 938
                  + RRKGIPHRAPF
Sbjct: 223 -------ARRRKGIPHRAPF 235


>ref|XP_002277078.1| PREDICTED: uncharacterized protein LOC100246080 [Vitis vinifera]
          Length = 247

 Score =  327 bits (838), Expect = 3e-87
 Identities = 165/260 (63%), Positives = 189/260 (72%), Gaps = 5/260 (1%)
 Frame = +3

Query: 174 MVSPMVRMGDNEETCPVWLKPLLKANYFVPCSSHGVAGKSECNMFCLDCMGDAFCSYCLI 353
           MVS + RMG N+   P WLKP+L+A+YFVPC  HG + KSECNMFCLDCMGDA CSYCLI
Sbjct: 1   MVSSIGRMG-NDHLGPPWLKPMLRASYFVPCGIHGDSNKSECNMFCLDCMGDALCSYCLI 59

Query: 354 HHKDHHVIQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSARIVFLNERPQPRPGKGVTN 533
           HHKDH V+QIRRSSYHNVVRVNEIQK+IDI+CVQTY+INSA+IVFLNERPQPRPGKGVTN
Sbjct: 60  HHKDHCVVQIRRSSYHNVVRVNEIQKYIDISCVQTYVINSAKIVFLNERPQPRPGKGVTN 119

Query: 534 TCEVCCRSLLDTFRFCSLGCKLGGINRGDPGLTFTPKFKHG---LHGYESDEPTTPKKIR 704
           TCE+CCRSLLD+FRFCSLGCKLG + RGDP LTF  K KHG    HG ESDE +TP+K +
Sbjct: 120 TCEICCRSLLDSFRFCSLGCKLGAMKRGDPDLTFWLKLKHGRETFHGSESDESSTPRKFQ 179

Query: 705 KGHGFDR-YLDARVFS-SGRIXXXXXXXXXXXXNQGDDQDQSALISPGTPPLSNHRNSGS 878
           + H F R  +D    S  G              + GD+   +  ISP TPP+ NH N   
Sbjct: 180 RTHLFSRLMIDGPTISLDGHHDATVAADKSTASSSGDETINN--ISPATPPIFNHSN--- 234

Query: 879 KKGPQHYSHRRKGIPHRAPF 938
                  + RRKGIPHRAPF
Sbjct: 235 -------ARRRKGIPHRAPF 247


>ref|NP_564128.1| PLATZ transcription factor domain-containing protein [Arabidopsis
           thaliana] gi|14030627|gb|AAK52988.1|AF375404_1
           At1g21000/F9H16_1 [Arabidopsis thaliana]
           gi|16226407|gb|AAL16160.1|AF428392_1 At1g21000/F9H16_1
           [Arabidopsis thaliana] gi|22136542|gb|AAM91057.1|
           At1g21000/F9H16_1 [Arabidopsis thaliana]
           gi|332191931|gb|AEE30052.1| PLATZ transcription factor
           domain-containing protein [Arabidopsis thaliana]
          Length = 246

 Score =  323 bits (828), Expect = 4e-86
 Identities = 161/258 (62%), Positives = 188/258 (72%), Gaps = 4/258 (1%)
 Frame = +3

Query: 177 VSPMVRMGDNEE-TCPVWLKPLLKANYFVPCSSHGVAGKSECNMFCLDCMGDAFCSYCLI 353
           + PM+R  + E+ T P WL P+L+ +YFVPCS H  + K+ECN+FCLDC G+AFCSYCL+
Sbjct: 1   MGPMIRTEEEEDYTSPPWLMPMLRGSYFVPCSIHVDSNKNECNLFCLDCAGNAFCSYCLV 60

Query: 354 HHKDHHVIQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSARIVFLNERPQPRPGKGVTN 533
            HKDH V+QIRRSSYHNVVRVNEIQKFIDIACVQTYIINSA+IVFLNERPQPR GKGVTN
Sbjct: 61  KHKDHRVVQIRRSSYHNVVRVNEIQKFIDIACVQTYIINSAKIVFLNERPQPRIGKGVTN 120

Query: 534 TCEVCCRSLLDTFRFCSLGCKLGGINRGDPGLTFTPKFKHG---LHGYESDEPTTPKKIR 704
           TCE+CCRSLLD+FRFCSLGCKLGG+ RGD  LTF+ K KHG   L G ESDE TTP K+R
Sbjct: 121 TCEICCRSLLDSFRFCSLGCKLGGMRRGDLSLTFSLKGKHGREYLGGSESDEATTPTKMR 180

Query: 705 KGHGFDRYLDARVFSSGRIXXXXXXXXXXXXNQGDDQDQSALISPGTPPLSNHRNSGSKK 884
           K + F+R +     S+ R             + GD+   S   SPGTPP+ NHRNS    
Sbjct: 181 KTNAFNRLMSGLSISTVRFDDYGPNGDQRSSSSGDEGGFS--FSPGTPPIYNHRNSS--- 235

Query: 885 GPQHYSHRRKGIPHRAPF 938
                  RRKG+PHRAPF
Sbjct: 236 -------RRKGVPHRAPF 246


Top