BLASTX nr result

ID: Bupleurum21_contig00000676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000676
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150417.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   258   6e-67
ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, put...   258   6e-67
ref|XP_002313797.1| predicted protein [Populus trichocarpa] gi|2...   254   6e-66
ref|NP_173114.1| Alpha-helical ferredoxin [Arabidopsis thaliana]...   254   8e-66
ref|NP_178022.1| NADH dehydrogenase [ubiquinone] iron-sulfur pro...   254   8e-66

>ref|XP_004150417.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial-like isoform 1 [Cucumis sativus]
           gi|449525518|ref|XP_004169764.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 221

 Score =  258 bits (659), Expect = 6e-67
 Identities = 123/134 (91%), Positives = 123/134 (91%)
 Frame = -1

Query: 610 SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 431
           SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI
Sbjct: 80  SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 139

Query: 430 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHXXXXXXXXXX 251
           EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETH          
Sbjct: 140 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL 199

Query: 250 XENGDRWETEIAEN 209
            ENGDRWETEIAEN
Sbjct: 200 LENGDRWETEIAEN 213


>ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus
           communis] gi|223549385|gb|EEF50873.1| NADH-ubiquinone
           oxidoreductase 1, chain, putative [Ricinus communis]
          Length = 222

 Score =  258 bits (659), Expect = 6e-67
 Identities = 123/134 (91%), Positives = 123/134 (91%)
 Frame = -1

Query: 610 SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 431
           SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI
Sbjct: 81  SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 140

Query: 430 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHXXXXXXXXXX 251
           EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETH          
Sbjct: 141 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL 200

Query: 250 XENGDRWETEIAEN 209
            ENGDRWETEIAEN
Sbjct: 201 LENGDRWETEIAEN 214


>ref|XP_002313797.1| predicted protein [Populus trichocarpa] gi|222850205|gb|EEE87752.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  254 bits (650), Expect = 6e-66
 Identities = 121/134 (90%), Positives = 122/134 (91%)
 Frame = -1

Query: 610 SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 431
           SLTLKYFFE KVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI
Sbjct: 81  SLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 140

Query: 430 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHXXXXXXXXXX 251
           EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEF+TETH          
Sbjct: 141 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFSTETHEELLYDKEKL 200

Query: 250 XENGDRWETEIAEN 209
            ENGDRWETEIAEN
Sbjct: 201 LENGDRWETEIAEN 214


>ref|NP_173114.1| Alpha-helical ferredoxin [Arabidopsis thaliana]
           gi|297844602|ref|XP_002890182.1| ATMLO14 [Arabidopsis
           lyrata subsp. lyrata]
           gi|75309869|sp|Q9FX83.1|NDS8B_ARATH RecName: Full=NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial; Flags: Precursor
           gi|9989050|gb|AAG10813.1|AC011808_1 Putative
           NADH-ubiquinone oxidoreductase [Arabidopsis thaliana]
           gi|16649105|gb|AAL24404.1| Putative NADH-ubiquinone
           oxidoreductase [Arabidopsis thaliana]
           gi|20148605|gb|AAM10193.1| putative NADH-ubiquinone
           oxidoreductase [Arabidopsis thaliana]
           gi|21553581|gb|AAM62674.1| NADH:ubiquinone
           oxidoreductase, putative [Arabidopsis thaliana]
           gi|297336024|gb|EFH66441.1| ATMLO14 [Arabidopsis lyrata
           subsp. lyrata] gi|332191363|gb|AEE29484.1| Alpha-helical
           ferredoxin [Arabidopsis thaliana]
          Length = 222

 Score =  254 bits (649), Expect = 8e-66
 Identities = 120/134 (89%), Positives = 122/134 (91%)
 Frame = -1

Query: 610 SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 431
           SLTLKYFF+ KVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEA+CPAQAITI
Sbjct: 81  SLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITI 140

Query: 430 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHXXXXXXXXXX 251
           EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETH          
Sbjct: 141 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL 200

Query: 250 XENGDRWETEIAEN 209
            ENGDRWETEIAEN
Sbjct: 201 LENGDRWETEIAEN 214


>ref|NP_178022.1| NADH dehydrogenase [ubiquinone] iron-sulfur protein 8 [Arabidopsis
           thaliana] gi|297842689|ref|XP_002889226.1|
           NADH-ubiquinone oxidoreductase 23 kDa subunit,
           mitochondrial [Arabidopsis lyrata subsp. lyrata]
           gi|3929364|sp|Q42599.1|NDS8A_ARATH RecName: Full=NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 8-A,
           mitochondrial; Flags: Precursor
           gi|666977|emb|CAA59061.1| NADH dehydrogenase
           [Arabidopsis thaliana] gi|3152573|gb|AAC17054.1| Match
           to NADH:ubiquinone oxidoreductase gb|X84318 from
           A.thaliana. ESTs gb|Z27005, gb|T04711, gb|T45078 and
           gb|Z28689 come from this gene [Arabidopsis thaliana]
           gi|15081697|gb|AAK82503.1| At1g79010/YUP8H12R_21
           [Arabidopsis thaliana] gi|18252265|gb|AAL62013.1|
           At1g79010/YUP8H12R_21 [Arabidopsis thaliana]
           gi|21593880|gb|AAM65847.1| NADH dehydrogenase, putative
           [Arabidopsis thaliana] gi|110740838|dbj|BAE98516.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|297335067|gb|EFH65485.1| NADH-ubiquinone
           oxidoreductase 23 kDa subunit, mitochondrial
           [Arabidopsis lyrata subsp. lyrata]
           gi|332198072|gb|AEE36193.1| NADH dehydrogenase
           [ubiquinone] iron-sulfur protein 8 [Arabidopsis
           thaliana]
          Length = 222

 Score =  254 bits (649), Expect = 8e-66
 Identities = 120/134 (89%), Positives = 122/134 (91%)
 Frame = -1

Query: 610 SLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITI 431
           SLTLKYFF+ KVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEA+CPAQAITI
Sbjct: 81  SLTLKYFFDPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAVCPAQAITI 140

Query: 430 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHXXXXXXXXXX 251
           EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETH          
Sbjct: 141 EAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKL 200

Query: 250 XENGDRWETEIAEN 209
            ENGDRWETEIAEN
Sbjct: 201 LENGDRWETEIAEN 214


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