BLASTX nr result

ID: Bupleurum21_contig00000672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00000672
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531690.1| chlorophyll A/B binding protein, putative [R...   339   2e-91
ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 1...   339   2e-91
gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]      338   4e-91
sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding pro...   338   4e-91
dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       337   1e-90

>ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223528666|gb|EEF30681.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  339 bits (870), Expect = 2e-91
 Identities = 166/209 (79%), Positives = 173/209 (82%)
 Frame = +1

Query: 1   RKIGSLGGGRITMRRTVKSAPESIWYGPDRPKYLGPFSDQTPSYLTGEFPGDYGWDTAGL 180
           RK+GS+GGGRITMRRTVKSAP+SIWYGPDRPKYLGPFS+QTPSYLTGEFPGDYGWDTAGL
Sbjct: 25  RKVGSVGGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL 84

Query: 181 SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD 360
           SADPETFAKNRELEVIHCRWAMLGALGCVFPEIL+KNGV FGEAVWFKAG+QIFSEGGLD
Sbjct: 85  SADPETFAKNRELEVIHCRWAMLGALGCVFPEILAKNGVKFGEAVWFKAGAQIFSEGGLD 144

Query: 361 YLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSILAIWASQVVLMGLIEGYRVGG 540
           YLG                                AQSILAIWA QVVLMG +EGYRVGG
Sbjct: 145 YLG--------------------------NPNLIHAQSILAIWACQVVLMGFVEGYRVGG 178

Query: 541 GPLGEGLDAIYPGGAFDPLGLADDPEAFA 627
           GPLGEGLD IYPGGAFDPLGLADDPEAFA
Sbjct: 179 GPLGEGLDPIYPGGAFDPLGLADDPEAFA 207


>ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
           [Vitis vinifera] gi|147794485|emb|CAN71610.1|
           hypothetical protein VITISV_000630 [Vitis vinifera]
          Length = 265

 Score =  339 bits (870), Expect = 2e-91
 Identities = 166/209 (79%), Positives = 172/209 (82%)
 Frame = +1

Query: 1   RKIGSLGGGRITMRRTVKSAPESIWYGPDRPKYLGPFSDQTPSYLTGEFPGDYGWDTAGL 180
           RK+G LGGGRITMRRTVKS P+SIWYGPDRPKYLGPFS+QTPSYLTGEFPGDYGWDTAGL
Sbjct: 25  RKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL 84

Query: 181 SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD 360
           SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLD
Sbjct: 85  SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLD 144

Query: 361 YLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSILAIWASQVVLMGLIEGYRVGG 540
           YLG                                AQSILAIWA QVVLMG +EGYRVGG
Sbjct: 145 YLG--------------------------NPNLVHAQSILAIWACQVVLMGFVEGYRVGG 178

Query: 541 GPLGEGLDAIYPGGAFDPLGLADDPEAFA 627
           GPLGEGLDAIYPGGAFDPLGLADDP+AFA
Sbjct: 179 GPLGEGLDAIYPGGAFDPLGLADDPDAFA 207


>gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
          Length = 261

 Score =  338 bits (868), Expect = 4e-91
 Identities = 166/209 (79%), Positives = 172/209 (82%)
 Frame = +1

Query: 1   RKIGSLGGGRITMRRTVKSAPESIWYGPDRPKYLGPFSDQTPSYLTGEFPGDYGWDTAGL 180
           RK+GS GGGRITMRRTVKSAP+SIWYGPDRPKYLGPFS+QTPSYLTGEFPGDYGWDTAGL
Sbjct: 25  RKVGSFGGGRITMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL 84

Query: 181 SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD 360
           SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGV FGEAVWFKAG+QIFSEGGLD
Sbjct: 85  SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGAQIFSEGGLD 144

Query: 361 YLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSILAIWASQVVLMGLIEGYRVGG 540
           YLG                                AQSILAIWA QVVLMG +EGYRVGG
Sbjct: 145 YLG--------------------------NPNLIHAQSILAIWAVQVVLMGFVEGYRVGG 178

Query: 541 GPLGEGLDAIYPGGAFDPLGLADDPEAFA 627
           GPLGEGLD IYPGGAFDPLGLADDP+AFA
Sbjct: 179 GPLGEGLDPIYPGGAFDPLGLADDPDAFA 207


>sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
           AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
           Precursor gi|20512|emb|CAA28639.1| chlorophyll a/b
           binding protein [Petunia x hybrida]
          Length = 265

 Score =  338 bits (868), Expect = 4e-91
 Identities = 167/209 (79%), Positives = 172/209 (82%)
 Frame = +1

Query: 1   RKIGSLGGGRITMRRTVKSAPESIWYGPDRPKYLGPFSDQTPSYLTGEFPGDYGWDTAGL 180
           RKIGS GGGR TMRRTVKSAP+SIWYG DRPKYLGPFS+QTPSYLTGEFPGDYGWDTAGL
Sbjct: 25  RKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL 84

Query: 181 SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD 360
           SADPETFA+NRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD
Sbjct: 85  SADPETFARNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD 144

Query: 361 YLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSILAIWASQVVLMGLIEGYRVGG 540
           YLG                                AQSILAIWA+QVVLMG +EGYRVGG
Sbjct: 145 YLG--------------------------NPNLIHAQSILAIWAAQVVLMGFVEGYRVGG 178

Query: 541 GPLGEGLDAIYPGGAFDPLGLADDPEAFA 627
           GPLGEGLD IYPGGAFDPLGLADDPEAFA
Sbjct: 179 GPLGEGLDKIYPGGAFDPLGLADDPEAFA 207


>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  337 bits (863), Expect = 1e-90
 Identities = 166/209 (79%), Positives = 173/209 (82%)
 Frame = +1

Query: 1   RKIGSLGGGRITMRRTVKSAPESIWYGPDRPKYLGPFSDQTPSYLTGEFPGDYGWDTAGL 180
           RKIGSLGGGRITMRRTV+SAPESIWYGPDRPKYLGPFS+QTPSYLTGEFPGDYGWDTAGL
Sbjct: 25  RKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGL 84

Query: 181 SADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVTFGEAVWFKAGSQIFSEGGLD 360
           SADPETFAKNRELEVIH RWAMLGALGCVFPEIL++NGV FGEAVWFKAG+QIFSEGGLD
Sbjct: 85  SADPETFAKNRELEVIHSRWAMLGALGCVFPEILARNGVKFGEAVWFKAGAQIFSEGGLD 144

Query: 361 YLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSILAIWASQVVLMGLIEGYRVGG 540
           YLG                                AQSILAIWASQVVLMG +EGYRVGG
Sbjct: 145 YLG--------------------------NPNLVHAQSILAIWASQVVLMGFVEGYRVGG 178

Query: 541 GPLGEGLDAIYPGGAFDPLGLADDPEAFA 627
           GPLGEGLD IYPGG+FDPLGLADDPEAFA
Sbjct: 179 GPLGEGLDKIYPGGSFDPLGLADDPEAFA 207


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